RNA–Protein interactions for RNA: YKL160W

ELF1, Transcript of Transcription elongation factor with a conserved zinc finger domain, yeast

Gene ELF1, Length 438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ELF1	YKL160W	PHD1	P36093	366 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	RTT107	P38850	1070 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	NOP16	P40007	231 aa	Known RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	SPO22	P40511	975 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	YIR014W	P40570	242 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	RPS10B	P46784	105 aa	Known RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	PYK2	P52489	506 aa	Known RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	DUO1	P53168	247 aa	Known RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	YML037C	Q03703	340 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	MRD1	Q06106	887 aa	Known RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	RPS10A	Q08745	105 aa	Predicted RBP	4.4	□□□□□ -1.71
ELF1	YKL160W	YPL272C	Q08984	517 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	BSC1	Q12140	328 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	HSP42	Q12329	375 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	ARP6	Q12509	438 aa		4.4	□□□□□ -1.71
ELF1	YKL160W	BAR1	P12630	587 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	BOS1	P25385	244 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	PUP3	P25451	205 aa	Known RBP	4.39	□□□□□ -1.71
ELF1	YKL160W	PPZ1	P26570	692 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	SNC1	P31109	117 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
ELF1	YKL160W	ROT2	P38138	954 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	TMA108	P40462	946 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	HOS2	P53096	452 aa	Predicted RBP	4.39	□□□□□ -1.71
ELF1	YKL160W	ARP5	P53946	755 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	RSM23	Q01163	450 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	YMR160W	Q03823	816 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	NDD1	Q08887	554 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	FMP40	Q08968	688 aa	Predicted RBP	4.39	□□□□□ -1.71
ELF1	YKL160W	ERP4	Q12450	207 aa		4.39	□□□□□ -1.71
ELF1	YKL160W	CDC23	P16522	626 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	HPR1	P17629	752 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	RAD51	P25454	400 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	POL4	P25615	582 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	CMK1	P27466	446 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	IMP2'	P32351	346 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	SSE2	P32590	693 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	TRS65	P32893	560 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	YBL055C	P34220	418 aa	Predicted RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	SPC34	P36131	295 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	NOP4	P37838	685 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	ICS2	P38284	255 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	LAG1	P38703	411 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	RRP3	P38712	501 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	AFG3	P39925	761 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	VID30	P53076	958 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	CUL3	P53202	744 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	HEL2	Q05580	639 aa	Known RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	SSK1	Q07084	712 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	LUC7	Q07508	261 aa	Predicted RBP	4.38	□□□□□ -1.71
ELF1	YKL160W	NRT1	Q08485	598 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	NMD4	Q12129	218 aa		4.38	□□□□□ -1.71
ELF1	YKL160W	SEC53	P07283	254 aa	Known RBP	4.37	□□□□□ -1.71
ELF1	YKL160W	COQ1	P18900	473 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	GFD2	P25370	566 aa	Known RBP	4.37	□□□□□ -1.71
ELF1	YKL160W	IMG1	P25626	169 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	PEP3	P27801	918 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	SYN8	P31377	255 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	MUM2	P38236	366 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	FLC2	P39719	783 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	SEC9	P40357	651 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	AZF1	P41696	914 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	APT1	P49435	187 aa	Known RBP	4.37	□□□□□ -1.71
ELF1	YKL160W	YGR117C	P53270	476 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	KEL3	Q08979	651 aa	Predicted RBP	4.37	□□□□□ -1.71
ELF1	YKL160W	SGT2	Q12118	346 aa	Known RBP	4.37	□□□□□ -1.71
ELF1	YKL160W	SPE4	Q12455	300 aa		4.37	□□□□□ -1.71
ELF1	YKL160W	TY1B-A	O13527	1196 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	AAC3	P18238	307 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	KGD1	P20967	1014 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	SAN1	P22470	610 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	LTV1	P34078	463 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	YBR144C	P34215	104 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	RIM2	P38127	377 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	KEL2	P50090	882 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	YNL247W	P53852	767 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	BNI5	P53890	448 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	YVH1	Q02256	364 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	MSS11	Q03825	758 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	COG4	Q06096	861 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	YPR172W	Q06608	200 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	CSR2	Q12734	1121 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	PGA3	Q12746	312 aa	Known RBP	4.36	□□□□□ -1.71
ELF1	YKL160W	RAD61	Q99359	647 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	FLO11	P08640	1367 aa		4.36	□□□□□ -1.71
ELF1	YKL160W	GLN3	P18494	730 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	TYR1	P20049	452 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	ERG1	P32476	496 aa	Known RBP	4.35	□□□□□ -1.71
ELF1	YKL160W	SWI3	P32591	825 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	ANP1	P32629	500 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	SAS3	P34218	831 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	MTR2	P34232	184 aa	Known RBP	4.35	□□□□□ -1.71
ELF1	YKL160W	YBL028C	P38202	106 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	YJL070C	P40361	888 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	AXL1	P40851	1208 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	GUF1	P46943	645 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	UPF3	P48412	387 aa	Known RBP	4.35	□□□□□ -1.71
ELF1	YKL160W	SMM1	P53720	384 aa	Known RBP	4.35	□□□□□ -1.71
ELF1	YKL160W	DUG3	P53871	357 aa		4.35	□□□□□ -1.71
ELF1	YKL160W	NGL3	Q03210	505 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms