RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ARF3P40994 183 aaRIP-Chip data6.72□□□□□ -1.33not detected
TDP1YBR223C STB1P42845 420 aa6.72□□□□□ -1.33
TDP1YBR223C SLD3P53135 668 aa6.72□□□□□ -1.33
TDP1YBR223C SPC105P53148 917 aa6.72□□□□□ -1.33
TDP1YBR223C IRC15Q02733 499 aa6.72□□□□□ -1.33
TDP1YBR223C PNG1Q02890 363 aa6.72□□□□□ -1.33
TDP1YBR223C PIR1Q03178 341 aa6.72□□□□□ -1.33
TDP1YBR223C APC4Q04601 652 aa6.72□□□□□ -1.33
TDP1YBR223C BSP1Q06604 576 aa6.72□□□□□ -1.33
TDP1YBR223C RSC3Q06639 885 aa6.72□□□□□ -1.33
TDP1YBR223C MFG1Q07684 458 aa6.72□□□□□ -1.33
TDP1YBR223C THP1Q08231 455 aa6.72□□□□□ -1.33
TDP1YBR223C TGL5Q12043 749 aa6.72□□□□□ -1.33
TDP1YBR223C MLH3Q12083 715 aa6.72□□□□□ -1.33
TDP1YBR223C YOR012WQ12351 137 aa6.72□□□□□ -1.33
TDP1YBR223C DAP2P18962 818 aa6.71□□□□□ -1.34
TDP1YBR223C PRI2P20457 528 aa6.71□□□□□ -1.34
TDP1YBR223C MNE1P24720 663 aa6.71□□□□□ -1.34
TDP1YBR223C GRR1P24814 1151 aa6.71□□□□□ -1.34
TDP1YBR223C GBP2P25555 427 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
TDP1YBR223C MEI5P32489 222 aa6.71□□□□□ -1.34
TDP1YBR223C PHO11P35842 467 aa6.71□□□□□ -1.34
TDP1YBR223C PHO12P38693 467 aa6.71□□□□□ -1.34
TDP1YBR223C YAR028WP39548 234 aa6.71□□□□□ -1.34
TDP1YBR223C EXO1P39875 702 aa6.71□□□□□ -1.34
TDP1YBR223C MMF1P40185 145 aaKnown RBP6.71□□□□□ -1.34
TDP1YBR223C RPL34BP40525 121 aaKnown RBP6.71□□□□□ -1.34
TDP1YBR223C GAT1P43574 510 aa6.71□□□□□ -1.34
TDP1YBR223C YJR124CP47159 448 aa6.71□□□□□ -1.34
TDP1YBR223C PSP1P50896 841 aaKnown RBP6.71□□□□□ -1.34
TDP1YBR223C FRE4P53746 719 aa6.71□□□□□ -1.34
TDP1YBR223C YNL260CP53846 198 aa6.71□□□□□ -1.34
TDP1YBR223C CIK1Q01649 594 aa6.71□□□□□ -1.34
TDP1YBR223C RSM24Q03976 319 aa6.71□□□□□ -1.34
TDP1YBR223C EMI1Q04406 187 aa6.71□□□□□ -1.34
TDP1YBR223C FMP45Q07651 309 aa6.71□□□□□ -1.34
TDP1YBR223C COS7Q07788 383 aa6.71□□□□□ -1.34
TDP1YBR223C BUD7Q08754 746 aa6.71□□□□□ -1.34
TDP1YBR223C YOR389WQ08912 624 aa6.71□□□□□ -1.34
TDP1YBR223C GLE1Q12315 538 aa6.71□□□□□ -1.34
TDP1YBR223C WTM1Q12363 437 aaKnown RBP6.71□□□□□ -1.34
TDP1YBR223C GTT2Q12390 233 aa6.71□□□□□ -1.34
TDP1YBR223C MHF1Q3E835 90 aa6.71□□□□□ -1.34
TDP1YBR223C YCL012CQ8J0M4 134 aa6.71□□□□□ -1.34
TDP1YBR223C SRN2Q99176 213 aa6.71□□□□□ -1.34
TDP1YBR223C YAR066WP0CX18 203 aa6.7□□□□□ -1.34
TDP1YBR223C YHR214WP0CX19 203 aa6.7□□□□□ -1.34
TDP1YBR223C IDI1P15496 288 aa6.7□□□□□ -1.34
TDP1YBR223C MRPL6P32904 214 aa6.7□□□□□ -1.34
TDP1YBR223C DOM34P33309 386 aa6.7□□□□□ -1.34
TDP1YBR223C RIB1P38066 345 aa6.7□□□□□ -1.34
TDP1YBR223C YPK3P38070 525 aa6.7□□□□□ -1.34
TDP1YBR223C UBA4P38820 440 aa6.7□□□□□ -1.34
TDP1YBR223C REF2P42073 533 aaPredicted RBP6.7□□□□□ -1.34
TDP1YBR223C RPS0BP46654 252 aaKnown RBP6.7□□□□□ -1.34
TDP1YBR223C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
TDP1YBR223C GPI17Q04080 534 aa6.7□□□□□ -1.34
TDP1YBR223C ARP10Q04549 284 aa6.7□□□□□ -1.34
TDP1YBR223C CIA1Q05583 330 aa6.7□□□□□ -1.34
TDP1YBR223C DBP9Q06218 594 aaKnown RBP6.7□□□□□ -1.34
TDP1YBR223C NTG2Q08214 380 aa6.7□□□□□ -1.34
TDP1YBR223C YDR056CQ12025 205 aa6.7□□□□□ -1.34
TDP1YBR223C RIB3Q99258 208 aa6.7□□□□□ -1.34
TDP1YBR223C Q0010Q9ZZX9 128 aa6.7□□□□□ -1.34
TDP1YBR223C YLR422WQ06409 1932 aa6.7□□□□□ -1.34
TDP1YBR223C PHO5P00635 467 aa6.69□□□□□ -1.34
TDP1YBR223C RPP1BP10622 106 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C KAR1P11927 433 aa6.69□□□□□ -1.34
TDP1YBR223C SGV1P23293 657 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C DEF1P35732 738 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C RMA1P36001 430 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C YBR139WP38109 508 aa6.69□□□□□ -1.34
TDP1YBR223C COS111P38308 924 aa6.69□□□□□ -1.34
TDP1YBR223C HSE1P38753 452 aa6.69□□□□□ -1.34
TDP1YBR223C PCL5P38794 229 aa6.69□□□□□ -1.34
TDP1YBR223C SSN3P39073 555 aa6.69□□□□□ -1.34
TDP1YBR223C RSP5P39940 809 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C AIM23P47015 356 aa6.69□□□□□ -1.34
TDP1YBR223C ATP22P50273 684 aaPredicted RBP6.69□□□□□ -1.34
TDP1YBR223C YLR257WQ06146 321 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C SWA2Q06677 668 aa6.69□□□□□ -1.34
TDP1YBR223C SOG2Q08817 791 aa6.69□□□□□ -1.34
TDP1YBR223C YPL245WQ12179 454 aaKnown RBP6.69□□□□□ -1.34
TDP1YBR223C PST1Q12355 444 aa6.69□□□□□ -1.34
TDP1YBR223C YDL199CQ12407 687 aa6.69□□□□□ -1.34
TDP1YBR223C YOR338WQ99326 363 aa6.69□□□□□ -1.34
TDP1YBR223C MF(ALPHA)1P01149 165 aa6.68□□□□□ -1.34
TDP1YBR223C UNG1P12887 359 aa6.68□□□□□ -1.34
TDP1YBR223C TEC1P18412 486 aa6.68□□□□□ -1.34
TDP1YBR223C SDH2P21801 266 aa6.68□□□□□ -1.34
TDP1YBR223C SPS19P32573 292 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C IRS4P36115 615 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C SRL3P36167 246 aa6.68□□□□□ -1.34
TDP1YBR223C RCK1P38622 512 aa6.68□□□□□ -1.34
TDP1YBR223C YHR020WP38708 688 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C LRP1P38801 184 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C MTG2P38860 518 aa6.68□□□□□ -1.34
TDP1YBR223C RPH1P39956 796 aa6.68□□□□□ -1.34
TDP1YBR223C GYP8P43570 497 aa6.68□□□□□ -1.34
TDP1YBR223C AIM22P47051 409 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms