RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DAGLBQ8NCG7 672 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 FOXD4L4Q8WXT5 416 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-229ENST00000486665 CUL5Q93034 780 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 PURBQ96QR8 312 aaKnown RBP14.65□□□□□ -0.06
HDAC6-229ENST00000486665 HTATIP2Q9BUP3 242 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 PCDHA6Q9UN73 950 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 PCDHA8Q9Y5H6 950 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 COL6A3P12111 3177 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 KIF28PB7ZC32 967 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 PIK3CDO00329 1044 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 SOX1O00570 391 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 TFRCP02786 760 aaKnown RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 COPB2P35606 906 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 KRT2P35908 639 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 CLK2P49760 499 aaKnown RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 HSD17B4P51659 736 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 GHRHRQ02643 423 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 EARS2Q5JPH6 523 aaKnown RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 WDR78Q5VTH9 848 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 JAKMIP3Q5VZ66 844 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 GALNT17Q6IS24 598 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 SLC30A10Q6XR72 485 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 RNF207Q6ZRF8 634 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 TNFRSF25Q93038 417 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 CRISPLD2Q9H0B8 497 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 A1CFQ9NQ94 594 aaKnown RBP14.64□□□□□ -0.07
HDAC6-229ENST00000486665 CYP39A1Q9NYL5 469 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 COL20A1Q9P218 1284 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 FBXO40Q9UH90 709 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 GJD2Q9UKL4 321 aa14.64□□□□□ -0.07
HDAC6-229ENST00000486665 BRD1O95696 1058 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 RPS6P62753 249 aaKnown RBP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 SAFBQ15424 915 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 GPR142Q7Z601 462 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 PLEKHH3Q7Z736 793 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 FERMT3Q86UX7 667 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 FCHSD1Q86WN1 690 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 BICD2Q8TD16 824 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
HDAC6-229ENST00000486665 PGBD1Q96JS3 809 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 MMP19Q99542 508 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 GLT8D2Q9H1C3 349 aa14.63□□□□□ -0.07
HDAC6-229ENST00000486665 FAM205CA6NFA0 338 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 ZSCAN22P10073 491 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-229ENST00000486665 PTPREP23469 700 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 MAPK4P31152 587 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-229ENST00000486665 RESTQ13127 1097 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 REXO1Q8N1G1 1221 aaKnown RBP14.62□□□□□ -0.07
HDAC6-229ENST00000486665 SAMD3Q8N6K7 520 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 TAAR1Q96RJ0 339 aa14.62□□□□□ -0.07
HDAC6-229ENST00000486665 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC6-229ENST00000486665 FOXP1Q9H334 677 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-229ENST00000486665 EDIL3O43854 480 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 PGK2P07205 417 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 FCER1AP12319 257 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 U2AF2P26368 475 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC6-229ENST00000486665 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 MAF1Q9H063 256 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 BRMS1Q9HCU9 246 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 MAP3K20Q9NYL2 800 aaKnown RBP14.61□□□□□ -0.07
HDAC6-229ENST00000486665 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-229ENST00000486665 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
HDAC6-229ENST00000486665 DNAJC25-GNG10A0A024R161 153 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 SOWAHBA6NEL2 793 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 STRNO43815 780 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 EVI5O60447 810 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 COBLO75128 1261 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
HDAC6-229ENST00000486665 ADORA2AP29274 412 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 NUCB2P80303 420 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 GRB14Q14449 540 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 KCTD2Q14681 263 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 MORN1Q5T089 497 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 PIK3AP1Q6ZUJ8 805 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 ABRAQ8N0Z2 381 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 FAM133AQ8N9E0 248 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 TRIB2Q92519 343 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 LRCH3Q96II8 777 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 CHMP5Q9NZZ3 219 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 ASTN1O14525 1302 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 PFASO15067 1338 aa14.6□□□□□ -0.07
HDAC6-229ENST00000486665 SLC15A5A6NIM6 579 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 F13A1P00488 732 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 FOSP01100 380 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-229ENST00000486665 HMGCRP04035 888 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 AP3B2Q13367 1082 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 GNL2Q13823 731 aaKnown RBP14.59□□□□□ -0.07
HDAC6-229ENST00000486665 KRT25Q7Z3Z0 450 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms