RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeastyeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTS1YOR359W DSN1P40568 576 aa8.14□□□□□ -1.11
VTS1YOR359W YPK9Q12697 1472 aa8.13□□□□□ -1.11
VTS1YOR359W RPN7Q06103 429 aaKnown RBP8.13□□□□□ -1.11
VTS1YOR359W NOT3P06102 836 aaKnown RBP8.12□□□□□ -1.11
VTS1YOR359W YPP1P46951 817 aa8.12□□□□□ -1.11
VTS1YOR359W TLG1Q03322 224 aa8.12□□□□□ -1.11
VTS1YOR359W NOP8Q08287 484 aaPredicted RBP8.12□□□□□ -1.11
VTS1YOR359W HIF1Q12373 385 aa8.12□□□□□ -1.11
VTS1YOR359W IRC20Q06554 1556 aa8.11□□□□□ -1.11
VTS1YOR359W DAN4P47179 1161 aa8.11□□□□□ -1.11
VTS1YOR359W ECM16Q04217 1267 aaKnown RBP8.11□□□□□ -1.11
VTS1YOR359W GYP5Q12344 894 aa8.11□□□□□ -1.11
VTS1YOR359W PET111P08468 800 aa8.1□□□□□ -1.11
VTS1YOR359W NUP170P38181 1502 aa8.1□□□□□ -1.11
VTS1YOR359W SMC4Q12267 1418 aa8.1□□□□□ -1.11
VTS1YOR359W CHZ1P40019 153 aaPredicted RBP8.1□□□□□ -1.11
VTS1YOR359W SRP54P20424 541 aaKnown RBP8.09□□□□□ -1.11
VTS1YOR359W SAP30P38429 201 aa8.08□□□□□ -1.12
VTS1YOR359W DCW1P36091 449 aa8.07□□□□□ -1.12
VTS1YOR359W LEU3P08638 886 aa8.06□□□□□ -1.12
VTS1YOR359W ABP1P15891 592 aaKnown RBP8.06□□□□□ -1.12
VTS1YOR359W CLB5P30283 435 aa8.06□□□□□ -1.12
VTS1YOR359W TFG1P41895 735 aaPredicted RBP8.06□□□□□ -1.12
VTS1YOR359W MLP2P40457 1679 aa8.06□□□□□ -1.12
VTS1YOR359W HTA1P04911 132 aaKnown RBP8.05□□□□□ -1.12
VTS1YOR359W HTA2P04912 132 aa8.05□□□□□ -1.12
VTS1YOR359W TOA1P32773 286 aa8.05□□□□□ -1.12
VTS1YOR359W SAP190P36123 1033 aa8.05□□□□□ -1.12
VTS1YOR359W MED8P38304 223 aa8.05□□□□□ -1.12
VTS1YOR359W JIP4Q03361 876 aa8.05□□□□□ -1.12
VTS1YOR359W NHA1Q99271 985 aa8.05□□□□□ -1.12
VTS1YOR359W MYO2P19524 1574 aaKnown RBP8.05□□□□□ -1.12
VTS1YOR359W SSM4P40318 1319 aa8.04□□□□□ -1.12
VTS1YOR359W SWI3P32591 825 aa8.03□□□□□ -1.12
VTS1YOR359W RRP14P36080 434 aaKnown RBP8.03□□□□□ -1.12
VTS1YOR359W ECM1P39715 212 aa8.03□□□□□ -1.12
VTS1YOR359W DJP1P40564 432 aa8.03□□□□□ -1.12
VTS1YOR359W RRP15Q06511 250 aaPredicted RBP8.03□□□□□ -1.12
VTS1YOR359W APL5Q08951 932 aaKnown RBP8.03□□□□□ -1.12
VTS1YOR359W BMS1Q08965 1183 aaKnown RBP8.03□□□□□ -1.12
VTS1YOR359W SPT16P32558 1035 aaKnown RBP8.02□□□□□ -1.13
VTS1YOR359W RTT106P40161 455 aa8.02□□□□□ -1.13
VTS1YOR359W YDL129WQ07555 291 aa8.02□□□□□ -1.13
VTS1YOR359W YEL023CP39992 682 aa8.01□□□□□ -1.13
VTS1YOR359W SSA1P10591 642 aaKnown RBP8.01□□□□□ -1.13
VTS1YOR359W SSA2P10592 639 aaKnown RBP8.01□□□□□ -1.13
VTS1YOR359W YVC1Q12324 675 aa8.01□□□□□ -1.13
VTS1YOR359W RAD51P25454 400 aa8□□□□□ -1.13
VTS1YOR359W PCT1P13259 424 aa7.99□□□□□ -1.13
VTS1YOR359W MSP1P28737 362 aa7.99□□□□□ -1.13
VTS1YOR359W VPS24P36095 224 aaKnown RBP7.99□□□□□ -1.13
VTS1YOR359W TPM2P40414 161 aa7.99□□□□□ -1.13
VTS1YOR359W RNT1Q02555 471 aa7.99□□□□□ -1.13
VTS1YOR359W CLB1P24868 471 aa7.98□□□□□ -1.13
VTS1YOR359W TCD1P38756 429 aa7.98□□□□□ -1.13
VTS1YOR359W SUB1P54000 292 aaKnown RBP7.98□□□□□ -1.13
VTS1YOR359W VPS60Q03390 229 aa7.98□□□□□ -1.13
VTS1YOR359W ERV41Q04651 352 aa7.98□□□□□ -1.13
VTS1YOR359W CIN4P39110 191 aa7.97□□□□□ -1.13
VTS1YOR359W YMR124WP39523 943 aaKnown RBP7.97□□□□□ -1.13
VTS1YOR359W PEA2P40091 420 aa7.97□□□□□ -1.13
VTS1YOR359W TAF2P23255 1407 aa7.97□□□□□ -1.13
VTS1YOR359W DEP1P31385 405 aa7.97□□□□□ -1.13
VTS1YOR359W CDC11P32458 415 aa7.97□□□□□ -1.13
VTS1YOR359W PTC4P38089 393 aa7.97□□□□□ -1.13
VTS1YOR359W ARL1P38116 183 aaKnown RBP7.97□□□□□ -1.13
VTS1YOR359W RSC8P43609 557 aaKnown RBP7.97□□□□□ -1.13
VTS1YOR359W KNS1P32350 737 aaPredicted RBP7.96□□□□□ -1.14
VTS1YOR359W PAP2P53632 584 aaKnown RBP7.96□□□□□ -1.14
VTS1YOR359W ALD3P54114 506 aa7.96□□□□□ -1.14
VTS1YOR359W VPS72Q03388 795 aa7.96□□□□□ -1.14
VTS1YOR359W YLL054CQ12244 843 aa7.96□□□□□ -1.14
VTS1YOR359W GIN4Q12263 1142 aa7.96□□□□□ -1.14
VTS1YOR359W BCK2P33306 851 aa7.95□□□□□ -1.14
VTS1YOR359W VPS30Q02948 557 aa7.95□□□□□ -1.14
VTS1YOR359W NOP14Q99207 810 aaKnown RBP7.95□□□□□ -1.14
VTS1YOR359W TRM3Q07527 1436 aa7.95□□□□□ -1.14
VTS1YOR359W SPT6P23615 1451 aaKnown RBP7.94□□□□□ -1.14
VTS1YOR359W RAD2P07276 1031 aa7.94□□□□□ -1.14
VTS1YOR359W CHL1P22516 861 aaPredicted RBP7.94□□□□□ -1.14
VTS1YOR359W RPC82P32349 654 aa7.94□□□□□ -1.14
VTS1YOR359W VID30P53076 958 aa7.94□□□□□ -1.14
VTS1YOR359W TY1B-DR4Q07793 1604 aa7.94□□□□□ -1.14
VTS1YOR359W PRE3P38624 215 aa7.93□□□□□ -1.14
VTS1YOR359W YDR344CQ05510 147 aa7.93□□□□□ -1.14
VTS1YOR359W MDM38Q08179 573 aa7.93□□□□□ -1.14
VTS1YOR359W GRE2Q12068 342 aaKnown RBP7.93□□□□□ -1.14
VTS1YOR359W RAD9P14737 1309 aa7.93□□□□□ -1.14
VTS1YOR359W NAB3P38996 802 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
VTS1YOR359W MPP10P47083 593 aaKnown RBP7.93□□□□□ -1.14
VTS1YOR359W ESC2Q06340 456 aa7.93□□□□□ -1.14
VTS1YOR359W STU1P38198 1513 aa7.92□□□□□ -1.14
VTS1YOR359W HSC82P15108 705 aaKnown RBP7.92□□□□□ -1.14
VTS1YOR359W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
VTS1YOR359W DNA2P38859 1522 aa7.91□□□□□ -1.14
VTS1YOR359W KAR3P17119 729 aa7.91□□□□□ -1.14
VTS1YOR359W RSC1P53236 928 aa7.91□□□□□ -1.14
VTS1YOR359W RAM2P29703 316 aa7.9□□□□□ -1.14
VTS1YOR359W MIF2P35201 549 aa7.9□□□□□ -1.14
VTS1YOR359W SWH1P35845 1188 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms