RNA–Protein interactions for RNA: YLR436C

ECM30, Transcript of Putative protein of unknown function, yeastyeast

Gene ECM30, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM30YLR436C HIF1Q12373 385 aa7.82□□□□□ -1.16
ECM30YLR436C TY1B-AO13527 1196 aaKnown RBP7.81□□□□□ -1.16
ECM30YLR436C SUP35P05453 685 aaKnown RBP7.81□□□□□ -1.16
ECM30YLR436C SSA1P10591 642 aaKnown RBP7.8□□□□□ -1.16
ECM30YLR436C SSA2P10592 639 aaKnown RBP7.8□□□□□ -1.16
ECM30YLR436C CDC45Q08032 650 aa7.8□□□□□ -1.16
ECM30YLR436C NUP159P40477 1460 aa7.8□□□□□ -1.16
ECM30YLR436C SWH1P35845 1188 aa7.8□□□□□ -1.16
ECM30YLR436C ALD3P54114 506 aa7.8□□□□□ -1.16
ECM30YLR436C LCD1Q04377 747 aa7.8□□□□□ -1.16
ECM30YLR436C COG8Q04632 607 aa7.8□□□□□ -1.16
ECM30YLR436C PSE1P32337 1089 aaKnown RBP7.8□□□□□ -1.16
ECM30YLR436C NUP157P40064 1391 aaKnown RBP7.8□□□□□ -1.16
ECM30YLR436C SWR1Q05471 1514 aa7.79□□□□□ -1.16
ECM30YLR436C KOG1P38873 1557 aa7.79□□□□□ -1.16
ECM30YLR436C RAD9P14737 1309 aa7.79□□□□□ -1.16
ECM30YLR436C PET111P08468 800 aa7.79□□□□□ -1.16
ECM30YLR436C MCM2P29469 868 aa7.79□□□□□ -1.16
ECM30YLR436C RPC82P32349 654 aa7.79□□□□□ -1.16
ECM30YLR436C BDP1P46678 594 aa7.79□□□□□ -1.16
ECM30YLR436C YMR102CQ03177 834 aa7.79□□□□□ -1.16
ECM30YLR436C YGL140CP53120 1219 aa7.79□□□□□ -1.16
ECM30YLR436C TOP1P04786 769 aa7.78□□□□□ -1.16
ECM30YLR436C ESC2Q06340 456 aa7.78□□□□□ -1.16
ECM30YLR436C PDR5P33302 1511 aaKnown RBP7.78□□□□□ -1.16
ECM30YLR436C SPT5P27692 1063 aaKnown RBP7.78□□□□□ -1.16
ECM30YLR436C YMR1P47147 688 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
ECM30YLR436C ITC1P53125 1264 aa7.78□□□□□ -1.16
ECM30YLR436C MCM1P11746 286 aa7.77□□□□□ -1.17
ECM30YLR436C PUP2P32379 260 aa7.77□□□□□ -1.17
ECM30YLR436C PEA2P40091 420 aa7.77□□□□□ -1.17
ECM30YLR436C YLL054CQ12244 843 aa7.77□□□□□ -1.17
ECM30YLR436C YVC1Q12324 675 aa7.77□□□□□ -1.17
ECM30YLR436C PDS5Q04264 1277 aa7.77□□□□□ -1.17
ECM30YLR436C LEM3P42838 414 aa7.76□□□□□ -1.17
ECM30YLR436C ORM2Q06144 216 aa7.76□□□□□ -1.17
ECM30YLR436C SPT16P32558 1035 aaKnown RBP7.76□□□□□ -1.17
ECM30YLR436C VPS30Q02948 557 aa7.76□□□□□ -1.17
ECM30YLR436C SML1Q04964 104 aa7.76□□□□□ -1.17
ECM30YLR436C ESP1Q03018 1630 aa7.76□□□□□ -1.17
ECM30YLR436C RAD3P06839 778 aa7.76□□□□□ -1.17
ECM30YLR436C MRS2Q01926 470 aa7.76□□□□□ -1.17
ECM30YLR436C HIR3P47171 1648 aa7.75□□□□□ -1.17
ECM30YLR436C PUS1Q12211 544 aaKnown RBP7.75□□□□□ -1.17
ECM30YLR436C MGA2P40578 1113 aa7.75□□□□□ -1.17
ECM30YLR436C DSF2P38213 736 aa7.75□□□□□ -1.17
ECM30YLR436C MDM38Q08179 573 aa7.75□□□□□ -1.17
ECM30YLR436C ESC1Q03661 1658 aaKnown RBP7.74□□□□□ -1.17
ECM30YLR436C VID30P53076 958 aa7.74□□□□□ -1.17
ECM30YLR436C YNL035CP53962 389 aaKnown RBP7.74□□□□□ -1.17
ECM30YLR436C SEC39Q12745 709 aa7.74□□□□□ -1.17
ECM30YLR436C SNQ2P32568 1501 aaKnown RBP7.74□□□□□ -1.17
ECM30YLR436C RPP0P05317 312 aaKnown RBP7.74□□□□□ -1.17
ECM30YLR436C TOA1P32773 286 aa7.74□□□□□ -1.17
ECM30YLR436C RKM3P38222 552 aa7.74□□□□□ -1.17
ECM30YLR436C PXR1P53335 271 aaPredicted RBP7.74□□□□□ -1.17
ECM30YLR436C SLP1Q12232 587 aa7.74□□□□□ -1.17
ECM30YLR436C ORC1P54784 914 aaPredicted RBP7.73□□□□□ -1.17
ECM30YLR436C NFI1Q12216 726 aa7.73□□□□□ -1.17
ECM30YLR436C SFI1Q12369 946 aa7.73□□□□□ -1.17
ECM30YLR436C YNL050CP53952 270 aa7.73□□□□□ -1.17
ECM30YLR436C HAP5Q02516 242 aa7.72□□□□□ -1.17
ECM30YLR436C NDL1Q06568 189 aa7.72□□□□□ -1.17
ECM30YLR436C RTT107P38850 1070 aa7.71□□□□□ -1.17
ECM30YLR436C SEC9P40357 651 aa7.71□□□□□ -1.17
ECM30YLR436C ZUO1P32527 433 aaKnown RBP7.71□□□□□ -1.18
ECM30YLR436C KAR3P17119 729 aa7.7□□□□□ -1.18
ECM30YLR436C MSH1P25846 959 aa7.69□□□□□ -1.18
ECM30YLR436C AIM20P40451 204 aa7.69□□□□□ -1.18
ECM30YLR436C STU2P46675 888 aa7.69□□□□□ -1.18
ECM30YLR436C GDT1P38301 280 aaPredicted RBP7.69□□□□□ -1.18
ECM30YLR436C SIT1P39980 628 aa7.69□□□□□ -1.18
ECM30YLR436C APL6P46682 809 aa7.69□□□□□ -1.18
ECM30YLR436C PHO87P25360 923 aa7.68□□□□□ -1.18
ECM30YLR436C SUB1P54000 292 aaKnown RBP7.68□□□□□ -1.18
ECM30YLR436C DNM1P54861 757 aa7.68□□□□□ -1.18
ECM30YLR436C PEX19Q07418 342 aa7.68□□□□□ -1.18
ECM30YLR436C CEP3P40969 608 aa7.68□□□□□ -1.18
ECM30YLR436C YOR389WQ08912 624 aa7.68□□□□□ -1.18
ECM30YLR436C PSO2P30620 661 aa7.68□□□□□ -1.18
ECM30YLR436C OLA1P38219 394 aaKnown RBP7.68□□□□□ -1.18
ECM30YLR436C VPS41P38959 992 aa7.68□□□□□ -1.18
ECM30YLR436C GEA2P39993 1459 aaKnown RBP7.68□□□□□ -1.18
ECM30YLR436C YMR124WP39523 943 aaKnown RBP7.67□□□□□ -1.18
ECM30YLR436C NUP145P49687 1317 aa7.67□□□□□ -1.18
ECM30YLR436C ROM2P51862 1356 aaKnown RBP7.67□□□□□ -1.18
ECM30YLR436C DPH5P32469 300 aaPredicted RBP7.67□□□□□ -1.18
ECM30YLR436C DNF1P32660 1571 aa7.66□□□□□ -1.18
ECM30YLR436C CDC11P32458 415 aa7.66□□□□□ -1.18
ECM30YLR436C IAH1P41734 238 aa7.66□□□□□ -1.18
ECM30YLR436C ARP5P53946 755 aa7.66□□□□□ -1.18
ECM30YLR436C GGA1Q06336 557 aa7.65□□□□□ -1.18
ECM30YLR436C MET5P47169 1442 aa7.65□□□□□ -1.18
ECM30YLR436C YOR1P53049 1477 aa7.65□□□□□ -1.18
ECM30YLR436C PDR15Q04182 1529 aaKnown RBP7.65□□□□□ -1.18
ECM30YLR436C MIC60P36112 540 aa7.65□□□□□ -1.19
ECM30YLR436C NDC80P40460 691 aa7.65□□□□□ -1.19
ECM30YLR436C SUI2P20459 304 aaKnown RBP7.64□□□□□ -1.19
ECM30YLR436C TFG1P41895 735 aaPredicted RBP7.64□□□□□ -1.19
ECM30YLR436C MPP10P47083 593 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms