RNA–Protein interactions for RNA: YLR436C

ECM30, Transcript of Putative protein of unknown function, yeastyeast

Gene ECM30, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM30YLR436C BFR2Q06631 534 aaKnown RBP10.55□□□□□ -0.72
ECM30YLR436C RQC2Q12532 1038 aaKnown RBP10.34□□□□□ -0.75
ECM30YLR436C NOP2P40991 618 aaKnown RBP9.86□□□□□ -0.83
ECM30YLR436C EBP2P36049 427 aaKnown RBP9.59□□□□□ -0.87
ECM30YLR436C NSR1P27476 414 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
ECM30YLR436C CAB3P36076 571 aa9.53□□□□□ -0.88
ECM30YLR436C URN1Q06525 465 aaKnown RBP9.5□□□□□ -0.89
ECM30YLR436C SIS2P36024 562 aa9.36□□□□□ -0.91
ECM30YLR436C SPA2P23201 1466 aaKnown RBP9.3□□□□□ -0.92
ECM30YLR436C SKI3P17883 1432 aaKnown RBP9.29□□□□□ -0.92
ECM30YLR436C YPR148CQ06523 435 aa9.23□□□□□ -0.93
ECM30YLR436C AVT3P36062 692 aa9.07□□□□□ -0.96
ECM30YLR436C SSN2P38931 1420 aa9.07□□□□□ -0.96
ECM30YLR436C TAF7Q05021 590 aa9.02□□□□□ -0.97
ECM30YLR436C YFR016CP43597 1233 aaKnown RBP8.99□□□□□ -0.97
ECM30YLR436C SGS1P35187 1447 aa8.93□□□□□ -0.98
ECM30YLR436C TCB3Q03640 1545 aaKnown RBP8.88□□□□□ -0.99
ECM30YLR436C ENP1P38333 483 aaKnown RBP8.84□□□□□ -0.99
ECM30YLR436C TCB2P48231 1178 aa8.82□□□□□ -1
ECM30YLR436C RPS0BP46654 252 aaKnown RBP8.82□□□□□ -1
ECM30YLR436C RSE1Q04693 1361 aaKnown RBP8.75□□□□□ -1.01
ECM30YLR436C CWC22P53333 577 aaKnown RBP8.75□□□□□ -1.01
ECM30YLR436C DRS1P32892 752 aaKnown RBP8.74□□□□□ -1.01
ECM30YLR436C STH1P32597 1359 aa8.69□□□□□ -1.02
ECM30YLR436C LEO1P38439 464 aa8.65□□□□□ -1.02
ECM30YLR436C DIP2Q12220 943 aaPredicted RBP8.65□□□□□ -1.03
ECM30YLR436C CLC1P17891 233 aa8.64□□□□□ -1.03
ECM30YLR436C MNN4P36044 1178 aa8.64□□□□□ -1.03
ECM30YLR436C SEC3P33332 1336 aaKnown RBP8.63□□□□□ -1.03
ECM30YLR436C MMS22Q06164 1454 aa8.63□□□□□ -1.03
ECM30YLR436C KRI1P42846 591 aaKnown RBP8.63□□□□□ -1.03
ECM30YLR436C UFD4P33202 1483 aa8.62□□□□□ -1.03
ECM30YLR436C IME2P32581 645 aa8.62□□□□□ -1.03
ECM30YLR436C CHD1P32657 1468 aa8.61□□□□□ -1.03
ECM30YLR436C AIM44Q99299 758 aa8.58□□□□□ -1.04
ECM30YLR436C TFA1P36100 482 aa8.58□□□□□ -1.04
ECM30YLR436C PRS1P32895 427 aaKnown RBP8.57□□□□□ -1.04
ECM30YLR436C SPT7P35177 1332 aa8.57□□□□□ -1.04
ECM30YLR436C ENV11P53246 860 aa8.56□□□□□ -1.04
ECM30YLR436C YGR130CP53278 816 aa8.53□□□□□ -1.04
ECM30YLR436C MON2P48563 1636 aaPredicted RBP8.53□□□□□ -1.04
ECM30YLR436C NOP53Q12080 455 aaKnown RBP8.53□□□□□ -1.04
ECM30YLR436C XRN1P22147 1528 aaKnown RBP8.52□□□□□ -1.05
ECM30YLR436C RLF2Q12495 606 aa8.51□□□□□ -1.05
ECM30YLR436C NUG1P40010 520 aaKnown RBP8.51□□□□□ -1.05
ECM30YLR436C FPR3P38911 411 aaKnown RBP8.51□□□□□ -1.05
ECM30YLR436C SPT21P35209 758 aa8.5□□□□□ -1.05
ECM30YLR436C YRB30P53107 440 aaPredicted RBP8.5□□□□□ -1.05
ECM30YLR436C QCR6P00127 147 aa8.5□□□□□ -1.05
ECM30YLR436C ECM5Q03214 1411 aa8.49□□□□□ -1.05
ECM30YLR436C OPY1P38271 328 aa8.48□□□□□ -1.05
ECM30YLR436C SPP41P38904 1435 aa8.48□□□□□ -1.05
ECM30YLR436C POL5P39985 1022 aaKnown RBP8.47□□□□□ -1.05
ECM30YLR436C DEF1P35732 738 aaKnown RBP8.46□□□□□ -1.06
ECM30YLR436C CFT1Q06632 1357 aaKnown RBP8.43□□□□□ -1.06
ECM30YLR436C TRM732Q03496 1420 aa8.41□□□□□ -1.06
ECM30YLR436C EAF7P53911 425 aaKnown RBP8.37□□□□□ -1.07
ECM30YLR436C INO80P53115 1489 aa8.37□□□□□ -1.07
ECM30YLR436C FPR4Q06205 392 aaPredicted RBP8.36□□□□□ -1.07
ECM30YLR436C PEP1P32319 1579 aa8.35□□□□□ -1.07
ECM30YLR436C MTC1P47018 478 aaKnown RBP8.35□□□□□ -1.07
ECM30YLR436C SNF7P39929 240 aaKnown RBP8.34□□□□□ -1.07
ECM30YLR436C IKI3Q06706 1349 aaKnown RBP8.34□□□□□ -1.07
ECM30YLR436C RNA1P11745 407 aaKnown RBP8.33□□□□□ -1.08
ECM30YLR436C SAS10Q12136 610 aaPredicted RBP8.32□□□□□ -1.08
ECM30YLR436C PSH1Q12161 406 aa8.32□□□□□ -1.08
ECM30YLR436C RPC31P17890 251 aa8.31□□□□□ -1.08
ECM30YLR436C TOP2P06786 1428 aaKnown RBP8.3□□□□□ -1.08
ECM30YLR436C SPT2P06843 333 aaPredicted RBP8.29□□□□□ -1.08
ECM30YLR436C SPC110P32380 944 aa8.29□□□□□ -1.08
ECM30YLR436C PAF1P38351 445 aa8.29□□□□□ -1.08
ECM30YLR436C YTA7P40340 1379 aa8.29□□□□□ -1.08
ECM30YLR436C PDR10P51533 1564 aa8.29□□□□□ -1.08
ECM30YLR436C SRB8P25648 1427 aa8.29□□□□□ -1.08
ECM30YLR436C RIX1P38883 763 aaPredicted RBP8.27□□□□□ -1.09
ECM30YLR436C BUD4P47136 1447 aa8.27□□□□□ -1.09
ECM30YLR436C NAP1P25293 417 aaKnown RBP8.26□□□□□ -1.09
ECM30YLR436C SSM4P40318 1319 aa8.23□□□□□ -1.09
ECM30YLR436C ROX1P25042 368 aa8.23□□□□□ -1.09
ECM30YLR436C YLR419WQ06698 1435 aaKnown RBP8.23□□□□□ -1.09
ECM30YLR436C NMD2P38798 1089 aaKnown RBP8.22□□□□□ -1.09
ECM30YLR436C FUN12P39730 1002 aaKnown RBP8.22□□□□□ -1.09
ECM30YLR436C CTR9P89105 1077 aa8.22□□□□□ -1.09
ECM30YLR436C MMS1Q06211 1407 aa8.22□□□□□ -1.09
ECM30YLR436C LEU3P08638 886 aa8.21□□□□□ -1.1
ECM30YLR436C RAD26P40352 1085 aa8.21□□□□□ -1.1
ECM30YLR436C IOC4Q04213 475 aa8.2□□□□□ -1.1
ECM30YLR436C NUP170P38181 1502 aa8.2□□□□□ -1.1
ECM30YLR436C SLN1P39928 1220 aaPredicted RBP8.19□□□□□ -1.1
ECM30YLR436C YNL011CP53980 444 aa8.19□□□□□ -1.1
ECM30YLR436C HSP82P02829 709 aaKnown RBP8.18□□□□□ -1.1
ECM30YLR436C PLP2Q12017 286 aa8.18□□□□□ -1.1
ECM30YLR436C VPS4P52917 437 aa8.17□□□□□ -1.1
ECM30YLR436C NOP58Q12499 511 aaKnown RBP8.17□□□□□ -1.1
ECM30YLR436C MYO4P32492 1471 aa8.17□□□□□ -1.1
ECM30YLR436C SWE1P32944 819 aa8.16□□□□□ -1.1
ECM30YLR436C RTT106P40161 455 aa8.16□□□□□ -1.1
ECM30YLR436C MYO2P19524 1574 aaKnown RBP8.16□□□□□ -1.1
ECM30YLR436C THO2P53552 1597 aaKnown RBP8.16□□□□□ -1.1
ECM30YLR436C SMC3P47037 1230 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms