RNA–Protein interactions for RNA: YGR271W

SLH1, Transcript of Putative RNA helicase related to Ski2p, yeast

Gene SLH1, Length 5,904 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLH1	YGR271W	YJL049W	P47048	450 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	ASI3	P53983	676 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	SPC110	P32380	944 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	APE4	P38821	490 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	YNR021W	P53723	404 aa	Known RBP	3.18	□□□□□ -1.9
SLH1	YGR271W	DPB4	Q04603	196 aa	Known RBP	3.18	□□□□□ -1.9
SLH1	YGR271W	RAD1	P06777	1100 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	SFB2	P53953	876 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SLH1	YGR271W	KAR2	P16474	682 aa	Known RBP	3.18	□□□□□ -1.9
SLH1	YGR271W	RRN3	P36070	627 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	NNF2	P53253	936 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	OSH2	Q12451	1283 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	RGA1	P39083	1007 aa		3.18	□□□□□ -1.9
SLH1	YGR271W	KAR3	P17119	729 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	VMA10	P48836	114 aa	Known RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	YGR130C	P53278	816 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	BUD21	Q08492	214 aa	Predicted RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	IOC2	Q12072	812 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	MIC60	P36112	540 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	OPY2	Q06810	360 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	BDF2	Q07442	638 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	ETT1	Q08421	412 aa	Known RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	ARG8	P18544	423 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	ENV11	P53246	860 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	GIM3	P53900	129 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	RPN7	Q06103	429 aa	Known RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	MAK16	P10962	306 aa	Predicted RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	REB1	P21538	810 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	CAJ1	P39101	391 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	PEX14	P53112	341 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	ECM16	Q04217	1267 aa	Known RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	ARD1	P07347	238 aa	Predicted RBP	3.17	□□□□□ -1.9
SLH1	YGR271W	NIP100	P33420	868 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	YBR287W	P38355	427 aa		3.17	□□□□□ -1.9
SLH1	YGR271W	POL4	P25615	582 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	SGM1	P47166	707 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	UTP5	Q04177	643 aa	Known RBP	3.16	□□□□□ -1.9
SLH1	YGR271W	SOV1	Q04748	898 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	RSA3	Q05942	220 aa	Known RBP	3.16	□□□□□ -1.9
SLH1	YGR271W	NOC3	Q07896	663 aa	Predicted RBP	3.16	□□□□□ -1.9
SLH1	YGR271W	RSM25	P40496	264 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	IOC4	Q04213	475 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	RKM4	Q12504	494 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	YML108W	Q03759	105 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	HCA4	P20448	770 aa	Known RBP	3.16	□□□□□ -1.9
SLH1	YGR271W	YLF2	P38746	405 aa		3.16	□□□□□ -1.9
SLH1	YGR271W	LSP1	Q12230	341 aa	Known RBP	3.16	□□□□□ -1.9
SLH1	YGR271W	TPM2	P40414	161 aa		3.15	□□□□□ -1.9
SLH1	YGR271W	RPA34	P47006	233 aa	Predicted RBP	3.15	□□□□□ -1.9
SLH1	YGR271W	RMD1	Q03441	430 aa		3.15	□□□□□ -1.9
SLH1	YGR271W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
SLH1	YGR271W	SRB7	P47822	140 aa		3.15	□□□□□ -1.9
SLH1	YGR271W	TRZ1	P36159	838 aa	Predicted RBP	3.15	□□□□□ -1.91
SLH1	YGR271W	SUM1	P46676	1062 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	MDG1	P53885	366 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	BET4	Q00618	327 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	RTP1	Q12751	981 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	CDC48	P25694	835 aa	Known RBP	3.15	□□□□□ -1.91
SLH1	YGR271W	RRP14	P36080	434 aa	Known RBP	3.15	□□□□□ -1.91
SLH1	YGR271W	NDC80	P40460	691 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	DSN1	P40568	576 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	MDM38	Q08179	573 aa		3.15	□□□□□ -1.91
SLH1	YGR271W	DID4	P36108	232 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	CCL1	P37366	393 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	DSL1	P53847	754 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	DAL5	P15365	543 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	DEP1	P31385	405 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	TFG1	P41895	735 aa	Predicted RBP	3.14	□□□□□ -1.91
SLH1	YGR271W	SWC4	P53201	476 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	SSK2	P53599	1579 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	TFC1	P32367	649 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	YFL066C	P43538	392 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	ERB1	Q04660	807 aa	Known RBP	3.14	□□□□□ -1.91
SLH1	YGR271W	YPR204W	Q08995	1032 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	SSP1	P38871	571 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	TMA64	Q04600	565 aa	Known RBP	3.14	□□□□□ -1.91
SLH1	YGR271W	IMP2'	P32351	346 aa		3.14	□□□□□ -1.91
SLH1	YGR271W	OLA1	P38219	394 aa	Known RBP	3.14	□□□□□ -1.91
SLH1	YGR271W	URB2	P47108	1174 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	HOP2	P53187	214 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	RAT1	Q02792	1006 aa	Known RBP	3.13	□□□□□ -1.91
SLH1	YGR271W	CBF2	P32504	956 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	YKR018C	P36114	725 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	BUD6	P41697	788 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	BIK1	P11709	440 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	UTP18	P40362	594 aa	Predicted RBP	3.13	□□□□□ -1.91
SLH1	YGR271W	CDC37	P06101	506 aa	Known RBP	3.13	□□□□□ -1.91
SLH1	YGR271W	KEL1	P38853	1164 aa	Known RBP	3.13	□□□□□ -1.91
SLH1	YGR271W	RTS1	P38903	757 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	YNL181W	P53878	407 aa		3.13	□□□□□ -1.91
SLH1	YGR271W	UBP15	P50101	1230 aa		3.12	□□□□□ -1.91
SLH1	YGR271W	CEF1	Q03654	590 aa	Predicted RBP	3.12	□□□□□ -1.91
SLH1	YGR271W	DNF1	P32660	1571 aa		3.12	□□□□□ -1.91
SLH1	YGR271W	RPP2B	P02400	110 aa	Known RBP	3.12	□□□□□ -1.91
SLH1	YGR271W	RPP0	P05317	312 aa	Known RBP	3.12	□□□□□ -1.91
SLH1	YGR271W	PRT1	P06103	763 aa	Known RBP	3.12	□□□□□ -1.91
SLH1	YGR271W	CLB5	P30283	435 aa		3.12	□□□□□ -1.91
SLH1	YGR271W	TAF1	P46677	1066 aa		3.12	□□□□□ -1.91
SLH1	YGR271W	EIS1	Q05050	843 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms