RNA–Protein interactions for RNA: YGR236C

SPG1, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG1, Length 288 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG1YGR236C NPR2P39923 615 aa10.4□□□□□ -0.74
SPG1YGR236C BUD21Q08492 214 aaPredicted RBP10.4□□□□□ -0.74
SPG1YGR236C TOM1Q03280 3268 aa10.4□□□□□ -0.74
SPG1YGR236C RPG1P38249 964 aaKnown RBP10.39□□□□□ -0.75
SPG1YGR236C TY3B-IQ7LHG5 1498 aaKnown RBP10.38□□□□□ -0.75
SPG1YGR236C CTH1P47976 325 aa10.38□□□□□ -0.75
SPG1YGR236C SSA4P22202 642 aaKnown RBP10.36□□□□□ -0.75
SPG1YGR236C DOT5P40553 215 aa10.36□□□□□ -0.75
SPG1YGR236C PRP45P28004 379 aaPredicted RBP10.33□□□□□ -0.76
SPG1YGR236C NUP192P47054 1683 aa10.32□□□□□ -0.76
SPG1YGR236C YJL181WP46987 611 aa10.31□□□□□ -0.76
SPG1YGR236C FKS3Q04952 1785 aa10.29□□□□□ -0.76
SPG1YGR236C PUS5Q06244 254 aa10.28□□□□□ -0.76
SPG1YGR236C PEX21P50091 288 aa10.26□□□□□ -0.77
SPG1YGR236C FOX2Q02207 900 aaKnown RBP10.26□□□□□ -0.77
SPG1YGR236C PSK1P31374 1356 aa10.26□□□□□ -0.77
SPG1YGR236C ROM2P51862 1356 aaKnown RBP10.25□□□□□ -0.77
SPG1YGR236C SNF2P22082 1703 aa10.22□□□□□ -0.77
SPG1YGR236C RAD9P14737 1309 aa10.2□□□□□ -0.78
SPG1YGR236C PRP40P33203 583 aaKnown RBP10.2□□□□□ -0.78
SPG1YGR236C RSF2P46974 1380 aa10.2□□□□□ -0.78
SPG1YGR236C TY4B-HP0C2J7 1802 aa10.19□□□□□ -0.78
SPG1YGR236C TY4B-JP47024 1803 aa10.19□□□□□ -0.78
SPG1YGR236C YKR023WP36119 530 aaKnown RBP10.18□□□□□ -0.78
SPG1YGR236C IES2P40154 320 aa10.18□□□□□ -0.78
SPG1YGR236C LAM6Q08001 693 aa10.17□□□□□ -0.78
SPG1YGR236C TAF5P38129 798 aa10.16□□□□□ -0.78
SPG1YGR236C DUS1P53759 423 aaKnown RBP10.15□□□□□ -0.78
SPG1YGR236C YEF3P16521 1044 aaKnown RBP10.14□□□□□ -0.79
SPG1YGR236C PRP5P21372 849 aaPredicted RBP10.14□□□□□ -0.79
SPG1YGR236C SDH2P21801 266 aa10.13□□□□□ -0.79
SPG1YGR236C EAF6P47128 113 aa10.13□□□□□ -0.79
SPG1YGR236C MAC1P35192 417 aa10.12□□□□□ -0.79
SPG1YGR236C CAB1Q04430 367 aa10.12□□□□□ -0.79
SPG1YGR236C YRF1-3P0CX14 1859 aa10.11□□□□□ -0.79
SPG1YGR236C YRF1-7P0CX15 1859 aa10.11□□□□□ -0.79
SPG1YGR236C YRF1-6P53819 1859 aa10.11□□□□□ -0.79
SPG1YGR236C SPT7P35177 1332 aa10.08□□□□□ -0.8
SPG1YGR236C MSB3P48566 633 aaPredicted RBP10.08□□□□□ -0.8
SPG1YGR236C ALD3P54114 506 aa10.08□□□□□ -0.8
SPG1YGR236C BDF1P35817 686 aa10.07□□□□□ -0.8
SPG1YGR236C SQS1P53866 767 aaKnown RBP10.06□□□□□ -0.8
SPG1YGR236C YKR075CP36155 307 aa10.05□□□□□ -0.8
SPG1YGR236C POM152P39685 1337 aa10.04□□□□□ -0.8
SPG1YGR236C COBP00163 385 aa10.02□□□□□ -0.81
SPG1YGR236C ETP1P38748 585 aaKnown RBP10.01□□□□□ -0.81
SPG1YGR236C ALD4P46367 519 aaKnown RBP9.99□□□□□ -0.81
SPG1YGR236C TCB1Q12466 1186 aa9.99□□□□□ -0.81
SPG1YGR236C CPS1P27614 576 aa9.98□□□□□ -0.81
SPG1YGR236C YER156CP40093 338 aaKnown RBP9.98□□□□□ -0.81
SPG1YGR236C SAP155P43612 1002 aa9.98□□□□□ -0.81
SPG1YGR236C VPS13Q07878 3144 aa9.98□□□□□ -0.81
SPG1YGR236C CTT1P06115 562 aa9.96□□□□□ -0.82
SPG1YGR236C YKL133CP36066 463 aa9.96□□□□□ -0.82
SPG1YGR236C MHP1P43638 1398 aa9.94□□□□□ -0.82
SPG1YGR236C MSN5P52918 1224 aa9.94□□□□□ -0.82
SPG1YGR236C YRF1-4O13559 1382 aa9.93□□□□□ -0.82
SPG1YGR236C PIB1Q06651 286 aa9.89□□□□□ -0.83
SPG1YGR236C YPR117WQ06116 2489 aa9.89□□□□□ -0.83
SPG1YGR236C YLR278CQ05854 1341 aa9.88□□□□□ -0.83
SPG1YGR236C TOS1P38288 455 aa9.88□□□□□ -0.83
SPG1YGR236C FPK1P53739 893 aa9.88□□□□□ -0.83
SPG1YGR236C KIN4Q01919 800 aa9.88□□□□□ -0.83
SPG1YGR236C ADE6P38972 1358 aaKnown RBP9.88□□□□□ -0.83
SPG1YGR236C APC1P53886 1748 aa9.87□□□□□ -0.83
SPG1YGR236C SLM3Q12093 417 aa9.86□□□□□ -0.83
SPG1YGR236C RAV1P47104 1357 aa9.86□□□□□ -0.83
SPG1YGR236C YKL222CP35995 705 aa9.84□□□□□ -0.83
SPG1YGR236C ENP1P38333 483 aaKnown RBP9.83□□□□□ -0.84
SPG1YGR236C RCM1P53972 490 aa9.82□□□□□ -0.84
SPG1YGR236C ERT1P38140 529 aa9.81□□□□□ -0.84
SPG1YGR236C BUG1Q12191 341 aa9.81□□□□□ -0.84
SPG1YGR236C MSB4Q12317 492 aa9.81□□□□□ -0.84
SPG1YGR236C UTP22P53254 1237 aaPredicted RBP9.79□□□□□ -0.84
SPG1YGR236C SLI15P38283 698 aa9.78□□□□□ -0.84
SPG1YGR236C CWH41P53008 833 aa9.78□□□□□ -0.84
SPG1YGR236C RIM15P43565 1770 aa9.78□□□□□ -0.84
SPG1YGR236C THS1P04801 734 aaKnown RBP9.77□□□□□ -0.85
SPG1YGR236C HPC2Q01448 625 aa9.77□□□□□ -0.85
SPG1YGR236C PPH3P32345 308 aa9.76□□□□□ -0.85
SPG1YGR236C MAL31P38156 614 aa9.76□□□□□ -0.85
SPG1YGR236C SRF1Q12516 437 aa9.76□□□□□ -0.85
SPG1YGR236C NAP1P25293 417 aaKnown RBP9.75□□□□□ -0.85
SPG1YGR236C CHZ1P40019 153 aaPredicted RBP9.74□□□□□ -0.85
SPG1YGR236C XKS1P42826 600 aa9.74□□□□□ -0.85
SPG1YGR236C NYV1Q12255 253 aa9.74□□□□□ -0.85
SPG1YGR236C YIL177CP40434 1758 aa9.73□□□□□ -0.85
SPG1YGR236C YJL225CP40889 1758 aa9.73□□□□□ -0.85
SPG1YGR236C RET1P22276 1149 aaKnown RBP9.72□□□□□ -0.85
SPG1YGR236C RRT14P40470 206 aa9.72□□□□□ -0.85
SPG1YGR236C NUM1Q00402 2748 aa9.71□□□□□ -0.85
SPG1YGR236C VHR2P40041 505 aa9.71□□□□□ -0.86
SPG1YGR236C FRK1Q03002 865 aaPredicted RBP9.71□□□□□ -0.86
SPG1YGR236C RTC1Q08281 1341 aa9.7□□□□□ -0.86
SPG1YGR236C YLR419WQ06698 1435 aaKnown RBP9.7□□□□□ -0.86
SPG1YGR236C RAD4P14736 754 aa9.69□□□□□ -0.86
SPG1YGR236C RTG2P32608 588 aaKnown RBP9.69□□□□□ -0.86
SPG1YGR236C PAM1P37304 830 aaKnown RBP9.68□□□□□ -0.86
SPG1YGR236C TIF6Q12522 245 aaKnown RBP9.68□□□□□ -0.86
SPG1YGR236C GRE2Q12068 342 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms