RNA–Protein interactions for RNA: YGR236C

SPG1, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG1, Length 288 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG1YGR236C MON2P48563 1636 aaPredicted RBP16.92■□□□□ 0.3
SPG1YGR236C INO80P53115 1489 aa16.83■□□□□ 0.28
SPG1YGR236C DNA2P38859 1522 aa16.04■□□□□ 0.16
SPG1YGR236C RSE1Q04693 1361 aaKnown RBP15.96■□□□□ 0.15
SPG1YGR236C KOG1P38873 1557 aa15.7■□□□□ 0.1
SPG1YGR236C SWR1Q05471 1514 aa15.65■□□□□ 0.1
SPG1YGR236C SPA2P23201 1466 aaKnown RBP15.14■□□□□ 0.01
SPG1YGR236C TY1B-DR4Q07793 1604 aa15.1■□□□□ 0.01
SPG1YGR236C TCB3Q03640 1545 aaKnown RBP14.98□□□□□ -0.01
SPG1YGR236C MTC1P47018 478 aaKnown RBP14.78□□□□□ -0.04
SPG1YGR236C ECM5Q03214 1411 aa14.41□□□□□ -0.1
SPG1YGR236C HSL1P34244 1518 aa14.33□□□□□ -0.12
SPG1YGR236C SPT6P23615 1451 aaKnown RBP14.31□□□□□ -0.12
SPG1YGR236C MIF2P35201 549 aa14.28□□□□□ -0.12
SPG1YGR236C THO2P53552 1597 aaKnown RBP14.22□□□□□ -0.13
SPG1YGR236C BUD4P47136 1447 aa14.19□□□□□ -0.14
SPG1YGR236C REV3P14284 1504 aa14.19□□□□□ -0.14
SPG1YGR236C MDS3P53094 1487 aa14.18□□□□□ -0.14
SPG1YGR236C SGS1P35187 1447 aa13.98□□□□□ -0.17
SPG1YGR236C HIR3P47171 1648 aa13.94□□□□□ -0.18
SPG1YGR236C PEP1P32319 1579 aa13.92□□□□□ -0.18
SPG1YGR236C BPT1P14772 1559 aa13.88□□□□□ -0.19
SPG1YGR236C YFR006WP43590 535 aa13.73□□□□□ -0.21
SPG1YGR236C ATG2P53855 1592 aa13.64□□□□□ -0.23
SPG1YGR236C YCF1P39109 1515 aaKnown RBP13.62□□□□□ -0.23
SPG1YGR236C XRN1P22147 1528 aaKnown RBP13.49□□□□□ -0.25
SPG1YGR236C MYO2P19524 1574 aaKnown RBP13.46□□□□□ -0.25
SPG1YGR236C TAF2P23255 1407 aa13.43□□□□□ -0.26
SPG1YGR236C BNI1P41832 1953 aa13.41□□□□□ -0.26
SPG1YGR236C SSK2P53599 1579 aa13.37□□□□□ -0.27
SPG1YGR236C LTE1P07866 1435 aa13.37□□□□□ -0.27
SPG1YGR236C MET5P47169 1442 aa13.33□□□□□ -0.28
SPG1YGR236C ABP1P15891 592 aaKnown RBP13.33□□□□□ -0.28
SPG1YGR236C CDC25P04821 1589 aa13.3□□□□□ -0.28
SPG1YGR236C RPA190P10964 1664 aaKnown RBP13.27□□□□□ -0.29
SPG1YGR236C SKI3P17883 1432 aaKnown RBP13.19□□□□□ -0.3
SPG1YGR236C ITT1Q04638 464 aa13.15□□□□□ -0.3
SPG1YGR236C DNF1P32660 1571 aa13.14□□□□□ -0.31
SPG1YGR236C IRC20Q06554 1556 aa13.14□□□□□ -0.31
SPG1YGR236C GEA2P39993 1459 aaKnown RBP13.11□□□□□ -0.31
SPG1YGR236C ESC1Q03661 1658 aaKnown RBP13.1□□□□□ -0.31
SPG1YGR236C UFD4P33202 1483 aa13.06□□□□□ -0.32
SPG1YGR236C MMS1Q06211 1407 aa13.05□□□□□ -0.32
SPG1YGR236C RPO31P04051 1460 aa13.05□□□□□ -0.32
SPG1YGR236C RKR1Q04781 1562 aa13.05□□□□□ -0.32
SPG1YGR236C SIN3P22579 1536 aa12.99□□□□□ -0.33
SPG1YGR236C CHD1P32657 1468 aa12.99□□□□□ -0.33
SPG1YGR236C ESP1Q03018 1630 aa12.84□□□□□ -0.35
SPG1YGR236C TY1B-BRQ12193 1756 aa12.84□□□□□ -0.35
SPG1YGR236C TY1B-GR3Q12316 1755 aa12.84□□□□□ -0.35
SPG1YGR236C TY1B-ORQ92393 1755 aa12.84□□□□□ -0.35
SPG1YGR236C PAN1P32521 1480 aa12.81□□□□□ -0.36
SPG1YGR236C SCC2Q04002 1493 aa12.81□□□□□ -0.36
SPG1YGR236C DNF2Q12675 1612 aa12.8□□□□□ -0.36
SPG1YGR236C DRS2P39524 1355 aa12.78□□□□□ -0.36
SPG1YGR236C TY2B-LR1P0C2J3 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-FP0CX63 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-GR2P0CX64 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-CP25384 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-DR2Q03494 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY1B-DR1Q03855 1755 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-DR3Q07791 1770 aaKnown RBP12.75□□□□□ -0.37
SPG1YGR236C TY2B-OR1Q12113 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-DR1Q12472 1770 aa12.75□□□□□ -0.37
SPG1YGR236C TY2B-OR2Q12501 1770 aa12.75□□□□□ -0.37
SPG1YGR236C YPK9Q12697 1472 aa12.71□□□□□ -0.38
SPG1YGR236C RQC2Q12532 1038 aaKnown RBP12.7□□□□□ -0.38
SPG1YGR236C YRF1-1P0CX20 1796 aa12.66□□□□□ -0.38
SPG1YGR236C YRF1-5P0CX21 1796 aa12.66□□□□□ -0.38
SPG1YGR236C YRF1-8P0CX22 1796 aa12.66□□□□□ -0.38
SPG1YGR236C YOR093CQ12275 1648 aa12.66□□□□□ -0.38
SPG1YGR236C VPS15P22219 1454 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-HO13535 1793 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-DR5P0C2I2 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-DR6P0C2I3 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-LR2P0C2I5 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-LR3P0C2I6 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY1B-PR1P0C2I9 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY1B-PR2P0C2J0 1756 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-PR3P0C2J1 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY1B-JR1P47098 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-ML2Q03434 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY1B-ER1Q03612 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-ML1Q04711 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY1B-GR2Q12269 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-OLQ12273 1755 aa12.6□□□□□ -0.39
SPG1YGR236C TY1B-PLQ12414 1755 aaKnown RBP12.6□□□□□ -0.39
SPG1YGR236C TY2B-BQ12491 1770 aa12.54□□□□□ -0.4
SPG1YGR236C TRM732Q03496 1420 aa12.53□□□□□ -0.4
SPG1YGR236C NUP159P40477 1460 aa12.47□□□□□ -0.41
SPG1YGR236C MMS22Q06164 1454 aa12.45□□□□□ -0.42
SPG1YGR236C TY1B-DR3Q99231 1755 aa12.42□□□□□ -0.42
SPG1YGR236C TOP2P06786 1428 aaKnown RBP12.37□□□□□ -0.43
SPG1YGR236C SSN2P38931 1420 aa12.37□□□□□ -0.43
SPG1YGR236C NTE1Q04958 1679 aa12.35□□□□□ -0.43
SPG1YGR236C NUP170P38181 1502 aa12.32□□□□□ -0.44
SPG1YGR236C TY1B-JR2P47100 1755 aaKnown RBP12.29□□□□□ -0.44
SPG1YGR236C TY1B-ER2Q03619 1755 aa12.29□□□□□ -0.44
SPG1YGR236C TY1B-MR1Q04214 1755 aa12.29□□□□□ -0.44
SPG1YGR236C TY1B-MR2Q04670 1755 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms