RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C YOL098CQ12496 1037 aa3.42□□□□□ -1.86
SSN2YDR443C XRN1P22147 1528 aaKnown RBP3.42□□□□□ -1.86
SSN2YDR443C GAL11P19659 1081 aa3.42□□□□□ -1.86
SSN2YDR443C MAK11P20484 414 aaKnown RBP3.42□□□□□ -1.86
SSN2YDR443C YKL091CP33324 310 aaKnown RBP3.41□□□□□ -1.86
SSN2YDR443C VAC8P39968 578 aa3.41□□□□□ -1.86
SSN2YDR443C MNN4P36044 1178 aa3.41□□□□□ -1.86
SSN2YDR443C NAB3P38996 802 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SSN2YDR443C STM1P39015 273 aaKnown RBP3.41□□□□□ -1.86
SSN2YDR443C KTR1P27810 393 aaKnown RBP3.4□□□□□ -1.86
SSN2YDR443C MIF2P35201 549 aa3.4□□□□□ -1.86
SSN2YDR443C SIS2P36024 562 aa3.4□□□□□ -1.86
SSN2YDR443C SEC8P32855 1065 aa3.4□□□□□ -1.87
SSN2YDR443C ERP5P38819 212 aa3.4□□□□□ -1.87
SSN2YDR443C UBP14P38237 781 aaKnown RBP3.4□□□□□ -1.87
SSN2YDR443C TFG1P41895 735 aaPredicted RBP3.4□□□□□ -1.87
SSN2YDR443C BBC1P47068 1157 aa3.4□□□□□ -1.87
SSN2YDR443C MPE1P35728 441 aaKnown RBP3.39□□□□□ -1.87
SSN2YDR443C COX6P00427 148 aa3.39□□□□□ -1.87
SSN2YDR443C TPM2P40414 161 aa3.39□□□□□ -1.87
SSN2YDR443C KTR7P40504 517 aa3.39□□□□□ -1.87
SSN2YDR443C MAG2Q06436 670 aaKnown RBP3.39□□□□□ -1.87
SSN2YDR443C ESP1Q03018 1630 aa3.39□□□□□ -1.87
SSN2YDR443C YCF1P39109 1515 aaKnown RBP3.39□□□□□ -1.87
SSN2YDR443C CIT2P08679 460 aa3.39□□□□□ -1.87
SSN2YDR443C ERP2P39704 215 aa3.39□□□□□ -1.87
SSN2YDR443C ALG12P53730 551 aa3.39□□□□□ -1.87
SSN2YDR443C SVF1Q05515 481 aa3.39□□□□□ -1.87
SSN2YDR443C TY4A-JP47023 414 aa3.39□□□□□ -1.87
SSN2YDR443C SSB1P11484 613 aaKnown RBP3.38□□□□□ -1.87
SSN2YDR443C SEC20P28791 383 aa3.38□□□□□ -1.87
SSN2YDR443C GRS1P38088 690 aaKnown RBP3.38□□□□□ -1.87
SSN2YDR443C RTG3P38165 486 aa3.38□□□□□ -1.87
SSN2YDR443C SSB2P40150 613 aaKnown RBP3.38□□□□□ -1.87
SSN2YDR443C HIF1Q12373 385 aa3.38□□□□□ -1.87
SSN2YDR443C ENO1P00924 437 aaKnown RBP3.38□□□□□ -1.87
SSN2YDR443C YHL050CP38721 697 aa3.38□□□□□ -1.87
SSN2YDR443C YHR219WP38900 624 aa3.38□□□□□ -1.87
SSN2YDR443C YEL077CQ3E7X8 1277 aa3.38□□□□□ -1.87
SSN2YDR443C ISW1P38144 1129 aa3.37□□□□□ -1.87
SSN2YDR443C ALD6P54115 500 aaKnown RBP3.37□□□□□ -1.87
SSN2YDR443C MSC6Q08818 692 aaKnown RBP3.37□□□□□ -1.87
SSN2YDR443C ALD3P54114 506 aa3.37□□□□□ -1.87
SSN2YDR443C RRP15Q06511 250 aaPredicted RBP3.37□□□□□ -1.87
SSN2YDR443C YDL121CQ07541 149 aa3.37□□□□□ -1.87
SSN2YDR443C SSN2P38931 1420 aa3.37□□□□□ -1.87
SSN2YDR443C VHR2P40041 505 aa3.37□□□□□ -1.87
SSN2YDR443C IOC3P43596 787 aa3.37□□□□□ -1.87
SSN2YDR443C ECM23Q02710 187 aa3.37□□□□□ -1.87
SSN2YDR443C MYO2P19524 1574 aaKnown RBP3.37□□□□□ -1.87
SSN2YDR443C MET1P36150 593 aa3.36□□□□□ -1.87
SSN2YDR443C TGL4P36165 910 aa3.36□□□□□ -1.87
SSN2YDR443C GRX7P38068 203 aa3.36□□□□□ -1.87
SSN2YDR443C FPR3P38911 411 aaKnown RBP3.36□□□□□ -1.87
SSN2YDR443C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
SSN2YDR443C BRE1Q07457 700 aaKnown RBP3.36□□□□□ -1.87
SSN2YDR443C TFC8Q12308 588 aa3.36□□□□□ -1.87
SSN2YDR443C WHI5Q12416 295 aa3.36□□□□□ -1.87
SSN2YDR443C KAR1P11927 433 aa3.36□□□□□ -1.87
SSN2YDR443C KAR5Q04746 504 aa3.36□□□□□ -1.87
SSN2YDR443C YPK9Q12697 1472 aa3.35□□□□□ -1.87
SSN2YDR443C YDJ1P25491 409 aaKnown RBP3.35□□□□□ -1.87
SSN2YDR443C RPT2P40327 437 aaKnown RBP3.35□□□□□ -1.87
SSN2YDR443C POB3Q04636 552 aaKnown RBP3.35□□□□□ -1.87
SSN2YDR443C EDS1P38073 919 aa3.35□□□□□ -1.87
SSN2YDR443C RPS0BP46654 252 aaKnown RBP3.35□□□□□ -1.87
SSN2YDR443C ENO2P00925 437 aaKnown RBP3.35□□□□□ -1.87
SSN2YDR443C TOA1P32773 286 aa3.35□□□□□ -1.87
SSN2YDR443C DNM1P54861 757 aa3.35□□□□□ -1.87
SSN2YDR443C ENT2Q05785 613 aa3.34□□□□□ -1.87
SSN2YDR443C PKH3Q03306 898 aaPredicted RBP3.34□□□□□ -1.87
SSN2YDR443C YEN1P40028 759 aa3.34□□□□□ -1.88
SSN2YDR443C YLR326WQ06170 240 aaKnown RBP3.34□□□□□ -1.88
SSN2YDR443C CDC53Q12018 815 aaKnown RBP3.34□□□□□ -1.88
SSN2YDR443C YGR161W-CQ3E744 92 aa3.34□□□□□ -1.88
SSN2YDR443C MET5P47169 1442 aa3.34□□□□□ -1.88
SSN2YDR443C GRX4P32642 244 aa3.33□□□□□ -1.88
SSN2YDR443C UBX7P38349 436 aa3.33□□□□□ -1.88
SSN2YDR443C MNN1P39106 762 aa3.33□□□□□ -1.88
SSN2YDR443C YJR142WP47173 342 aa3.33□□□□□ -1.88
SSN2YDR443C STB3Q12427 513 aa3.33□□□□□ -1.88
SSN2YDR443C SCJ1P25303 377 aa3.33□□□□□ -1.88
SSN2YDR443C YCK3P39962 524 aa3.33□□□□□ -1.88
SSN2YDR443C RPO31P04051 1460 aa3.33□□□□□ -1.88
SSN2YDR443C TY1B-BRQ12193 1756 aa3.33□□□□□ -1.88
SSN2YDR443C TY1B-GR3Q12316 1755 aa3.33□□□□□ -1.88
SSN2YDR443C TY1B-ORQ92393 1755 aa3.33□□□□□ -1.88
SSN2YDR443C MAK16P10962 306 aaPredicted RBP3.33□□□□□ -1.88
SSN2YDR443C BCH2P36122 765 aa3.33□□□□□ -1.88
SSN2YDR443C GIR2Q03768 265 aaPredicted RBP3.33□□□□□ -1.88
SSN2YDR443C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SSN2YDR443C SEC6P32844 805 aa3.32□□□□□ -1.88
SSN2YDR443C TPS3P38426 1054 aaKnown RBP3.32□□□□□ -1.88
SSN2YDR443C MAD1P40957 749 aa3.32□□□□□ -1.88
SSN2YDR443C RAD59Q12223 238 aa3.32□□□□□ -1.88
SSN2YDR443C ESS1P22696 170 aa3.32□□□□□ -1.88
SSN2YDR443C TRX2P22803 104 aaKnown RBP3.32□□□□□ -1.88
SSN2YDR443C CDC25P04821 1589 aa3.32□□□□□ -1.88
SSN2YDR443C PBP2P38151 413 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SSN2YDR443C MDJ2P42834 146 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms