RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W UGA2P38067 497 aa2.73□□□□□ -1.97
SXM1YDR395W IOC2Q12072 812 aa2.72□□□□□ -1.97
SXM1YDR395W PDR5P33302 1511 aaKnown RBP2.71□□□□□ -1.98
SXM1YDR395W YAP5P40574 245 aa2.71□□□□□ -1.98
SXM1YDR395W RSM7P47150 247 aa2.71□□□□□ -1.98
SXM1YDR395W PSD2P53037 1138 aaKnown RBP2.71□□□□□ -1.98
SXM1YDR395W YLR271WQ06152 274 aa2.71□□□□□ -1.98
SXM1YDR395W GCN2P15442 1659 aa2.71□□□□□ -1.98
SXM1YDR395W PTP3P40048 928 aa2.7□□□□□ -1.98
SXM1YDR395W RQC2Q12532 1038 aaKnown RBP2.7□□□□□ -1.98
SXM1YDR395W SPP1Q03012 353 aa2.69□□□□□ -1.98
SXM1YDR395W NUP188P52593 1655 aaKnown RBP2.69□□□□□ -1.98
SXM1YDR395W TY1B-DR3Q99231 1755 aa2.68□□□□□ -1.98
SXM1YDR395W TIF11P38912 153 aaKnown RBP2.68□□□□□ -1.98
SXM1YDR395W EAR1Q03212 550 aa2.68□□□□□ -1.98
SXM1YDR395W WSC3Q12215 556 aa2.68□□□□□ -1.98
SXM1YDR395W SRB8P25648 1427 aa2.67□□□□□ -1.98
SXM1YDR395W YAP3P38749 330 aa2.67□□□□□ -1.98
SXM1YDR395W SRF1Q12516 437 aa2.67□□□□□ -1.98
SXM1YDR395W URN1Q06525 465 aaKnown RBP2.67□□□□□ -1.98
SXM1YDR395W LDB19Q12502 818 aa2.67□□□□□ -1.98
SXM1YDR395W SSN2P38931 1420 aa2.66□□□□□ -1.98
SXM1YDR395W BBC1P47068 1157 aa2.65□□□□□ -1.98
SXM1YDR395W VTH1P40438 1549 aa2.65□□□□□ -1.99
SXM1YDR395W VTH2P40890 1549 aa2.65□□□□□ -1.99
SXM1YDR395W SNQ2P32568 1501 aaKnown RBP2.65□□□□□ -1.99
SXM1YDR395W RSF2P46974 1380 aa2.64□□□□□ -1.99
SXM1YDR395W PIB1Q06651 286 aa2.64□□□□□ -1.99
SXM1YDR395W NUP157P40064 1391 aaKnown RBP2.64□□□□□ -1.99
SXM1YDR395W VPS29P38759 282 aa2.64□□□□□ -1.99
SXM1YDR395W SSA4P22202 642 aaKnown RBP2.62□□□□□ -1.99
SXM1YDR395W YBL086CP38177 466 aa2.62□□□□□ -1.99
SXM1YDR395W STS1P38637 319 aa2.62□□□□□ -1.99
SXM1YDR395W MET10P39692 1035 aa2.62□□□□□ -1.99
SXM1YDR395W ULI1P43604 169 aa2.62□□□□□ -1.99
SXM1YDR395W ALD2P47771 506 aa2.62□□□□□ -1.99
SXM1YDR395W PDR11P40550 1411 aa2.62□□□□□ -1.99
SXM1YDR395W RPS9BP05755 195 aaKnown RBP2.61□□□□□ -1.99
SXM1YDR395W THI12P42883 340 aa2.61□□□□□ -1.99
SXM1YDR395W THI5P43534 340 aa2.61□□□□□ -1.99
SXM1YDR395W THI11P47183 340 aa2.61□□□□□ -1.99
SXM1YDR395W YVH1Q02256 364 aaKnown RBP2.61□□□□□ -1.99
SXM1YDR395W THI13Q07748 340 aa2.61□□□□□ -1.99
SXM1YDR395W MRM1P25270 412 aa2.61□□□□□ -1.99
SXM1YDR395W TSC11P40061 1430 aa2.61□□□□□ -1.99
SXM1YDR395W CST9Q06032 482 aa2.61□□□□□ -1.99
SXM1YDR395W RCR1P38212 213 aa2.6□□□□□ -1.99
SXM1YDR395W DAN4P47179 1161 aa2.6□□□□□ -1.99
SXM1YDR395W TRP5P00931 707 aaKnown RBP2.6□□□□□ -1.99
SXM1YDR395W YNR014WP53719 212 aa2.6□□□□□ -1.99
SXM1YDR395W YOL036WQ08206 761 aa2.6□□□□□ -1.99
SXM1YDR395W TAF7Q05021 590 aa2.6□□□□□ -1.99
SXM1YDR395W CTH1P47976 325 aa2.59□□□□□ -1.99
SXM1YDR395W YDR344CQ05510 147 aa2.59□□□□□ -1.99
SXM1YDR395W MSB4Q12317 492 aa2.59□□□□□ -1.99
SXM1YDR395W SAM3Q08986 587 aa2.59□□□□□ -2
SXM1YDR395W BMT6Q12291 365 aa2.59□□□□□ -2
SXM1YDR395W MAL31P38156 614 aa2.58□□□□□ -2
SXM1YDR395W CUP1-1P0CX80 61 aa2.58□□□□□ -2
SXM1YDR395W CUP1-2P0CX81 61 aa2.58□□□□□ -2
SXM1YDR395W VMA1P17255 1071 aaKnown RBP2.57□□□□□ -2
SXM1YDR395W RTG1P32607 177 aa2.57□□□□□ -2
SXM1YDR395W ETP1P38748 585 aaKnown RBP2.57□□□□□ -2
SXM1YDR395W SET4P42948 560 aa2.57□□□□□ -2
SXM1YDR395W YJL171CP46992 396 aa2.57□□□□□ -2
SXM1YDR395W FRK1Q03002 865 aaPredicted RBP2.57□□□□□ -2
SXM1YDR395W CAT8P39113 1433 aa2.57□□□□□ -2
SXM1YDR395W DBP1P24784 617 aaKnown RBP2.57□□□□□ -2
SXM1YDR395W YMR1P47147 688 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SXM1YDR395W SSA2P10592 639 aaKnown RBP2.55□□□□□ -2
SXM1YDR395W SEC61P32915 480 aa2.55□□□□□ -2
SXM1YDR395W SPT7P35177 1332 aa2.55□□□□□ -2
SXM1YDR395W NCR1Q12200 1170 aa2.55□□□□□ -2
SXM1YDR395W GEA1P47102 1408 aaPredicted RBP2.54□□□□□ -2
SXM1YDR395W YNL035CP53962 389 aaKnown RBP2.54□□□□□ -2
SXM1YDR395W EAP1P36041 632 aaKnown RBP2.54□□□□□ -2
SXM1YDR395W NST1P53935 1240 aa2.53□□□□□ -2
SXM1YDR395W IMH1Q06704 911 aaKnown RBP2.53□□□□□ -2
SXM1YDR395W YLL066CQ99208 1374 aa2.53□□□□□ -2
SXM1YDR395W SSP1P38871 571 aa2.52□□□□□ -2.01
SXM1YDR395W DLD1P32891 587 aa2.52□□□□□ -2.01
SXM1YDR395W RTG3P38165 486 aa2.51□□□□□ -2.01
SXM1YDR395W NCS6P53088 359 aa2.51□□□□□ -2.01
SXM1YDR395W MGA2P40578 1113 aa2.5□□□□□ -2.01
SXM1YDR395W SEC7P11075 2009 aaKnown RBP2.5□□□□□ -2.01
SXM1YDR395W GSC2P40989 1895 aa2.49□□□□□ -2.01
SXM1YDR395W YMR084WA2P2R3 262 aa2.49□□□□□ -2.01
SXM1YDR395W SAP30P38429 201 aa2.49□□□□□ -2.01
SXM1YDR395W APP1P53933 587 aa2.49□□□□□ -2.01
SXM1YDR395W YSP2Q06681 1438 aa2.48□□□□□ -2.01
SXM1YDR395W YEL023CP39992 682 aa2.48□□□□□ -2.01
SXM1YDR395W TYW1Q08960 810 aaKnown RBP2.48□□□□□ -2.01
SXM1YDR395W TIF6Q12522 245 aaKnown RBP2.48□□□□□ -2.01
SXM1YDR395W CHL1P22516 861 aaPredicted RBP2.48□□□□□ -2.01
SXM1YDR395W PTC4P38089 393 aa2.48□□□□□ -2.01
SXM1YDR395W PRE3P38624 215 aa2.48□□□□□ -2.01
SXM1YDR395W BCK2P33306 851 aa2.47□□□□□ -2.01
SXM1YDR395W SOL3P38858 249 aa2.47□□□□□ -2.01
SXM1YDR395W JIP4Q03361 876 aa2.47□□□□□ -2.01
SXM1YDR395W YDL129WQ07555 291 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms