RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W CWC21Q03375 135 aaKnown RBP3.48□□□□□ -1.85
NIP7YPL211W YLR297WQ05899 129 aa3.48□□□□□ -1.85
NIP7YPL211W GSH2Q08220 491 aa3.48□□□□□ -1.85
NIP7YPL211W SRL1Q08673 210 aa3.48□□□□□ -1.85
NIP7YPL211W HIP1P06775 603 aa3.47□□□□□ -1.85
NIP7YPL211W ASP3-2P0CX77 362 aa3.47□□□□□ -1.85
NIP7YPL211W ASP3-3P0CX78 362 aa3.47□□□□□ -1.85
NIP7YPL211W ASP3-4P0CX79 362 aa3.47□□□□□ -1.85
NIP7YPL211W ASP3-1P0CZ17 362 aa3.47□□□□□ -1.85
NIP7YPL211W NAT1P12945 854 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W PHO13P19881 312 aa3.47□□□□□ -1.85
NIP7YPL211W YCR043CP25361 127 aa3.47□□□□□ -1.85
NIP7YPL211W RSA4P25382 515 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W PRR1P28708 518 aa3.47□□□□□ -1.85
NIP7YPL211W SWI3P32591 825 aa3.47□□□□□ -1.85
NIP7YPL211W CSE2P33308 149 aa3.47□□□□□ -1.85
NIP7YPL211W YKL023WP36103 277 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W YHL041WP38730 149 aa3.47□□□□□ -1.85
NIP7YPL211W TPA1P40032 644 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W YER186CP40101 306 aa3.47□□□□□ -1.85
NIP7YPL211W VPS25P47142 202 aa3.47□□□□□ -1.85
NIP7YPL211W VPS75P53853 264 aa3.47□□□□□ -1.85
NIP7YPL211W RPA49Q01080 415 aaPredicted RBP3.47□□□□□ -1.85
NIP7YPL211W YLR287CQ05881 355 aa3.47□□□□□ -1.85
NIP7YPL211W PIG1Q06216 648 aa3.47□□□□□ -1.85
NIP7YPL211W CSR1Q06705 408 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W DNL4Q08387 944 aaPredicted RBP3.47□□□□□ -1.85
NIP7YPL211W FRE3Q08905 711 aa3.47□□□□□ -1.85
NIP7YPL211W SGT2Q12118 346 aaKnown RBP3.47□□□□□ -1.85
NIP7YPL211W YLR112WQ12130 139 aa3.47□□□□□ -1.85
NIP7YPL211W YML003WP0CF16 290 aa3.46□□□□□ -1.86
NIP7YPL211W CDC42P19073 191 aa3.46□□□□□ -1.86
NIP7YPL211W YSP3P25036 478 aa3.46□□□□□ -1.86
NIP7YPL211W CBF2P32504 956 aa3.46□□□□□ -1.86
NIP7YPL211W XRS2P33301 854 aa3.46□□□□□ -1.86
NIP7YPL211W NIP100P33420 868 aa3.46□□□□□ -1.86
NIP7YPL211W HEL1P36113 551 aa3.46□□□□□ -1.86
NIP7YPL211W SLX1P38324 304 aa3.46□□□□□ -1.86
NIP7YPL211W ARC40P38328 384 aaKnown RBP3.46□□□□□ -1.86
NIP7YPL211W FSH1P38777 243 aaKnown RBP3.46□□□□□ -1.86
NIP7YPL211W YHR054CP38780 354 aa3.46□□□□□ -1.86
NIP7YPL211W RTT107P38850 1070 aa3.46□□□□□ -1.86
NIP7YPL211W CPR7P47103 393 aa3.46□□□□□ -1.86
NIP7YPL211W YLR455WQ06188 304 aa3.46□□□□□ -1.86
NIP7YPL211W YPR078CQ06813 372 aa3.46□□□□□ -1.86
NIP7YPL211W PLP2Q12017 286 aa3.46□□□□□ -1.86
NIP7YPL211W GIS3Q12418 502 aa3.46□□□□□ -1.86
NIP7YPL211W AHC1Q12433 566 aa3.46□□□□□ -1.86
NIP7YPL211W YLR422WQ06409 1932 aa3.45□□□□□ -1.86
NIP7YPL211W RRT12P25381 491 aa3.45□□□□□ -1.86
NIP7YPL211W ADK2P26364 225 aa3.45□□□□□ -1.86
NIP7YPL211W GCS1P35197 352 aa3.45□□□□□ -1.86
NIP7YPL211W TES1P41903 349 aaKnown RBP3.45□□□□□ -1.86
NIP7YPL211W SMC3P47037 1230 aa3.45□□□□□ -1.86
NIP7YPL211W ESBP6P53918 673 aa3.45□□□□□ -1.86
NIP7YPL211W DIG1Q03063 452 aaKnown RBP3.45□□□□□ -1.86
NIP7YPL211W IZH1Q03419 316 aa3.45□□□□□ -1.86
NIP7YPL211W PPM1Q04081 328 aa3.45□□□□□ -1.86
NIP7YPL211W CDD1Q06549 142 aa3.45□□□□□ -1.86
NIP7YPL211W SDH5Q08230 162 aa3.45□□□□□ -1.86
NIP7YPL211W ABP140Q08641 628 aaKnown RBP3.45□□□□□ -1.86
NIP7YPL211W BAG7Q12128 409 aa3.45□□□□□ -1.86
NIP7YPL211W ATG9Q12142 997 aa3.45□□□□□ -1.86
NIP7YPL211W RRP6Q12149 733 aaKnown RBP3.45□□□□□ -1.86
NIP7YPL211W CTF3Q12748 733 aa3.45□□□□□ -1.86
NIP7YPL211W ATP4P05626 244 aa3.44□□□□□ -1.86
NIP7YPL211W CDC33P07260 213 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W MRP2P10663 115 aaPredicted RBP3.44□□□□□ -1.86
NIP7YPL211W APA1P16550 321 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W NCP1P16603 691 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W SPO12P17123 173 aa3.44□□□□□ -1.86
NIP7YPL211W VPS3P23643 1011 aa3.44□□□□□ -1.86
NIP7YPL211W DAL2P25335 343 aa3.44□□□□□ -1.86
NIP7YPL211W LRE1P25579 583 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W EBP2P36049 427 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W EXO84P38261 753 aa3.44□□□□□ -1.86
NIP7YPL211W SMC2P38989 1170 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W MET30P39014 640 aa3.44□□□□□ -1.86
NIP7YPL211W KAP123P40069 1113 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W RPT2P40327 437 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W UBP8P50102 471 aa3.44□□□□□ -1.86
NIP7YPL211W NOP13P53883 403 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
NIP7YPL211W EMI2Q04409 500 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W SWA2Q06677 668 aa3.44□□□□□ -1.86
NIP7YPL211W APL4Q12028 832 aa3.44□□□□□ -1.86
NIP7YPL211W SWT1Q12104 458 aa3.44□□□□□ -1.86
NIP7YPL211W YLR049CQ12110 428 aa3.44□□□□□ -1.86
NIP7YPL211W PKH2Q12236 1081 aaKnown RBP3.44□□□□□ -1.86
NIP7YPL211W AI5_BETAQ9ZZX0 354 aa3.44□□□□□ -1.86
NIP7YPL211W TAO3P40468 2376 aa3.43□□□□□ -1.86
NIP7YPL211W ATP2P00830 511 aaKnown RBP3.43□□□□□ -1.86
NIP7YPL211W GAL80P04387 435 aa3.43□□□□□ -1.86
NIP7YPL211W HAP2P06774 265 aa3.43□□□□□ -1.86
NIP7YPL211W SNF1P06782 633 aaKnown RBP3.43□□□□□ -1.86
NIP7YPL211W CHS1P08004 1131 aa3.43□□□□□ -1.86
NIP7YPL211W YFL068WP0CX99 160 aa3.43□□□□□ -1.86
NIP7YPL211W YLL066W-AP0CY00 160 aa3.43□□□□□ -1.86
NIP7YPL211W YLL067W-AP0CY01 160 aa3.43□□□□□ -1.86
NIP7YPL211W SPC110P32380 944 aa3.43□□□□□ -1.86
NIP7YPL211W EFB1P32471 206 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms