RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	NUP120	P35729	1037 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	EMC3	P36039	253 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	RRN3	P36070	627 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	YBR238C	P38330	731 aa	Known RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	YHR033W	P38690	423 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	INM1	P38710	295 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	UBA4	P38820	440 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	YHB1	P39676	399 aa	Known RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	OAF1	P39720	1047 aa	Predicted RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	EMP65	P40085	556 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	MGS1	P40151	587 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	NDE1	P40215	560 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	PRM2	P40534	656 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	DUG1	P43616	481 aa	Known RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	YJR030C	P47101	745 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	HXT16	P47185	567 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	UBX4	P54730	416 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	HXT15	P54854	567 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	LSM3	P57743	89 aa	Known RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	ECM9	Q02202	377 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	YMR034C	Q05131	434 aa	Predicted RBP	5.22	□□□□□ -1.57
CBC2	YPL178W	PFA4	Q12006	378 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	YOR223W	Q12015	292 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	RGT2	Q12300	763 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	YDR262W	Q12331	272 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	PST1	Q12355	444 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	GPR1	Q12361	961 aa		5.22	□□□□□ -1.57
CBC2	YPL178W	HFA1	P32874	2273 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	AI3	P03877	415 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	RHO2	P06781	192 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	STE3	P06783	470 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	CMP2	P14747	604 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	TRM1	P15565	570 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	YCK2	P23292	546 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	MGM101	P32787	269 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	CDC13	P32797	924 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	MRE11	P32829	692 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	LYS1	P38998	373 aa	RIP-Chip data	5.21	□□□□□ -1.58	not detected
CBC2	YPL178W	AIF1	P52923	378 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	TAF6	P53040	516 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	RTS3	P53289	263 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	GTR2	P53290	341 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	ARE2	P53629	642 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	YNR021W	P53723	404 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	SLM2	P53955	656 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	MRS2	Q01926	470 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	RRN11	Q04712	507 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	APC9	Q12107	265 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	YLL054C	Q12244	843 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	CMR1	Q12510	522 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	YPL247C	Q12523	523 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	RRP12	Q12754	1228 aa	Known RBP	5.21	□□□□□ -1.58
CBC2	YPL178W	LAG2	Q92325	660 aa		5.21	□□□□□ -1.58
CBC2	YPL178W	SLH1	P53327	1967 aa	Known RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	PRP16	P15938	1071 aa	Predicted RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	ART10	P18634	518 aa	Known RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	PRP6	P19735	899 aa	Predicted RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	PTP1	P25044	335 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	RPC19	P28000	142 aa	Known RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	MEI5	P32489	222 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SFC1	P33303	322 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SDH3	P33421	198 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SHU2	P38957	223 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	PFK26	P40433	827 aa	Known RBP	5.2	□□□□□ -1.58
CBC2	YPL178W	COA1	P40452	197 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	TRS85	P46944	698 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	YJL049W	P47048	450 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	TIS11	P47977	285 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SGF73	P53165	657 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	VHS1	Q03785	461 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SIZ1	Q04195	904 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	RIF2	Q06208	395 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	YDL121C	Q07541	149 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	YOL019W	Q08157	551 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	DIN7	Q12086	430 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	YPR011C	Q12251	326 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	SKM1	Q12469	655 aa		5.2	□□□□□ -1.58
CBC2	YPL178W	GUK1	P15454	187 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	FUR1	P18562	216 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	RAD51	P25454	400 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	SKN1	P33336	771 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	LOS1	P33418	1100 aa	Predicted RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	RPS1A	P33442	255 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	SOL2	P37262	315 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	YBR032W	P38223	100 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	OCA5	P38738	679 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	BZZ1	P38822	633 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	UME6	P39001	836 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	BEM4	P39011	633 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	SCS2	P40075	244 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	LRO1	P40345	661 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	VMA13	P41807	478 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	YGR053C	P53234	283 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	YGR250C	P53316	781 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	NOP19	P53317	196 aa	Predicted RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	NRM1	P53718	249 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	PRO2	P54885	456 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	YAT1	P80235	687 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	RNY1	Q02933	434 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	YML131W	Q03102	365 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 328.7 ms