RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W PPH22P23595 377 aa3.84□□□□□ -1.79
HSH49YOR319W SPB1P25582 841 aaPredicted RBP3.84□□□□□ -1.79
HSH49YOR319W KRR1P25586 316 aaPredicted RBP3.84□□□□□ -1.79
HSH49YOR319W MGM1P32266 881 aa3.84□□□□□ -1.79
HSH49YOR319W SWH1P35845 1188 aa3.84□□□□□ -1.79
HSH49YOR319W THI2P38141 450 aa3.84□□□□□ -1.79
HSH49YOR319W SLM4P38247 162 aa3.84□□□□□ -1.79
HSH49YOR319W UBA4P38820 440 aa3.84□□□□□ -1.79
HSH49YOR319W YGR149WP48236 432 aa3.84□□□□□ -1.79
HSH49YOR319W ATP22P50273 684 aaPredicted RBP3.84□□□□□ -1.79
HSH49YOR319W PYK2P52489 506 aaKnown RBP3.84□□□□□ -1.79
HSH49YOR319W YGL138CP53122 345 aa3.84□□□□□ -1.79
HSH49YOR319W CUL3P53202 744 aa3.84□□□□□ -1.79
HSH49YOR319W BTN2P53286 410 aa3.84□□□□□ -1.79
HSH49YOR319W SKO1Q02100 647 aa3.84□□□□□ -1.79
HSH49YOR319W HOT1Q03213 719 aa3.84□□□□□ -1.79
HSH49YOR319W RAV1P47104 1357 aa3.84□□□□□ -1.79
HSH49YOR319W RRP7P25368 297 aaPredicted RBP3.83□□□□□ -1.8
HSH49YOR319W RAD14P28519 371 aa3.83□□□□□ -1.8
HSH49YOR319W YKL023WP36103 277 aaKnown RBP3.83□□□□□ -1.8
HSH49YOR319W ARP1P38696 384 aa3.83□□□□□ -1.8
HSH49YOR319W ATG27P46989 271 aa3.83□□□□□ -1.8
HSH49YOR319W COS5P47187 383 aa3.83□□□□□ -1.8
HSH49YOR319W YGR111WP53265 400 aa3.83□□□□□ -1.8
HSH49YOR319W MEH1Q02205 184 aa3.83□□□□□ -1.8
HSH49YOR319W YPL068CQ02749 293 aa3.83□□□□□ -1.8
HSH49YOR319W RSF1Q05043 376 aa3.83□□□□□ -1.8
HSH49YOR319W COS7Q07788 383 aa3.83□□□□□ -1.8
HSH49YOR319W PGC1Q08959 321 aa3.83□□□□□ -1.8
HSH49YOR319W SMF3Q12078 473 aaPredicted RBP3.83□□□□□ -1.8
HSH49YOR319W CRC1Q12289 327 aa3.83□□□□□ -1.8
HSH49YOR319W SKS1Q12505 502 aa3.83□□□□□ -1.8
HSH49YOR319W BRR1Q99177 341 aaPredicted RBP3.83□□□□□ -1.8
HSH49YOR319W GPH1P06738 902 aaKnown RBP3.82□□□□□ -1.8
HSH49YOR319W RHO2P06781 192 aa3.82□□□□□ -1.8
HSH49YOR319W COR1P07256 457 aa3.82□□□□□ -1.8
HSH49YOR319W PEP4P07267 405 aaKnown RBP3.82□□□□□ -1.8
HSH49YOR319W YIM1P28625 365 aa3.82□□□□□ -1.8
HSH49YOR319W SHP1P34223 423 aa3.82□□□□□ -1.8
HSH49YOR319W STV1P37296 890 aa3.82□□□□□ -1.8
HSH49YOR319W ARA1P38115 344 aa3.82□□□□□ -1.8
HSH49YOR319W YHR054CP38780 354 aa3.82□□□□□ -1.8
HSH49YOR319W SPC97P38863 823 aa3.82□□□□□ -1.8
HSH49YOR319W YHR210CP38893 341 aa3.82□□□□□ -1.8
HSH49YOR319W IRC7P43623 340 aa3.82□□□□□ -1.8
HSH49YOR319W SNG1P46950 547 aa3.82□□□□□ -1.8
HSH49YOR319W YGL108CP53139 140 aa3.82□□□□□ -1.8
HSH49YOR319W DUG3P53871 357 aa3.82□□□□□ -1.8
HSH49YOR319W YNL144CP53907 740 aa3.82□□□□□ -1.8
HSH49YOR319W EOS1P53938 366 aa3.82□□□□□ -1.8
HSH49YOR319W HEF3P53978 1044 aaKnown RBP3.82□□□□□ -1.8
HSH49YOR319W SLG1P54867 378 aa3.82□□□□□ -1.8
HSH49YOR319W YDR286CQ05530 114 aa3.82□□□□□ -1.8
HSH49YOR319W YDL057WQ07379 328 aa3.82□□□□□ -1.8
HSH49YOR319W THP1Q08231 455 aa3.82□□□□□ -1.8
HSH49YOR319W APL5Q08951 932 aaKnown RBP3.82□□□□□ -1.8
HSH49YOR319W MED2Q12124 431 aa3.82□□□□□ -1.8
HSH49YOR319W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8 RIP-Chip
HSH49YOR319W RPN5Q12250 445 aaKnown RBP3.82□□□□□ -1.8
HSH49YOR319W HIP1P06775 603 aa3.81□□□□□ -1.8
HSH49YOR319W SRV2P17555 526 aaKnown RBP3.81□□□□□ -1.8
HSH49YOR319W YAP1P19880 650 aaKnown RBP3.81□□□□□ -1.8
HSH49YOR319W RPB8P20436 146 aa3.81□□□□□ -1.8
HSH49YOR319W COQ3P27680 312 aa3.81□□□□□ -1.8
HSH49YOR319W AFG1P32317 509 aa3.81□□□□□ -1.8
HSH49YOR319W VPS41P38959 992 aa3.81□□□□□ -1.8
HSH49YOR319W MBB1P39534 108 aa3.81□□□□□ -1.8
HSH49YOR319W PCI8P40512 444 aa3.81□□□□□ -1.8
HSH49YOR319W EFM4P40516 257 aa3.81□□□□□ -1.8
HSH49YOR319W SCW4P53334 386 aaKnown RBP3.81□□□□□ -1.8
HSH49YOR319W ACL4Q03771 387 aa3.81□□□□□ -1.8
HSH49YOR319W ARP10Q04549 284 aa3.81□□□□□ -1.8
HSH49YOR319W HEL2Q05580 639 aaKnown RBP3.81□□□□□ -1.8
HSH49YOR319W MMR1Q06324 491 aa3.81□□□□□ -1.8
HSH49YOR319W MCP2Q06567 569 aa3.81□□□□□ -1.8
HSH49YOR319W SIL1Q08199 421 aa3.81□□□□□ -1.8
HSH49YOR319W DCI1Q08558 271 aa3.81□□□□□ -1.8
HSH49YOR319W YOR365CQ08844 703 aa3.81□□□□□ -1.8
HSH49YOR319W PFA4Q12006 378 aa3.81□□□□□ -1.8
HSH49YOR319W CFT2Q12102 859 aaPredicted RBP3.81□□□□□ -1.8
HSH49YOR319W NCE102Q12207 173 aaRIP-Chip data3.81□□□□□ -1.8not detected
HSH49YOR319W YMR085WP0CF18 432 aa3.8□□□□□ -1.8
HSH49YOR319W SNF3P10870 884 aa3.8□□□□□ -1.8
HSH49YOR319W URA4P20051 364 aa3.8□□□□□ -1.8
HSH49YOR319W CLN1P20437 546 aa3.8□□□□□ -1.8
HSH49YOR319W CNA1P23287 553 aa3.8□□□□□ -1.8
HSH49YOR319W HEL1P36113 551 aa3.8□□□□□ -1.8
HSH49YOR319W BNA4P38169 460 aa3.8□□□□□ -1.8
HSH49YOR319W PHO90P39535 881 aa3.8□□□□□ -1.8
HSH49YOR319W YIL060WP40519 144 aa3.8□□□□□ -1.8
HSH49YOR319W YJR154WP47181 346 aa3.8□□□□□ -1.8
HSH49YOR319W OCA1P50946 238 aaPredicted RBP3.8□□□□□ -1.8
HSH49YOR319W VTC3Q02725 835 aa3.8□□□□□ -1.8
HSH49YOR319W CAC2Q04199 468 aa3.8□□□□□ -1.8
HSH49YOR319W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
HSH49YOR319W CUE5Q08412 411 aaKnown RBP3.8□□□□□ -1.8
HSH49YOR319W VPS54Q12071 889 aa3.8□□□□□ -1.8
HSH49YOR319W HSP42Q12329 375 aa3.8□□□□□ -1.8
HSH49YOR319W YML002WP0CF17 737 aa3.79□□□□□ -1.8
HSH49YOR319W PEP5P12868 1029 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms