RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C PDS5Q04264 1277 aa3.31□□□□□ -1.88
HRD1YOL013C ARV1Q06541 321 aa3.31□□□□□ -1.88
HRD1YOL013C MCP2Q06567 569 aa3.31□□□□□ -1.88
HRD1YOL013C ATG23Q06671 453 aa3.31□□□□□ -1.88
HRD1YOL013C RTT109Q07794 436 aa3.31□□□□□ -1.88
HRD1YOL013C YDR061WQ12298 539 aa3.31□□□□□ -1.88
HRD1YOL013C ZPS1Q12512 249 aa3.31□□□□□ -1.88
HRD1YOL013C TFB5Q3E7C1 72 aaPredicted RBP3.31□□□□□ -1.88
HRD1YOL013C RPL6BP05739 176 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C ILV2P07342 687 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C PCT1P13259 424 aa3.3□□□□□ -1.88
HRD1YOL013C URA4P20051 364 aa3.3□□□□□ -1.88
HRD1YOL013C RAD51P25454 400 aa3.3□□□□□ -1.88
HRD1YOL013C CNE1P27825 502 aa3.3□□□□□ -1.88
HRD1YOL013C CDC5P32562 705 aa3.3□□□□□ -1.88
HRD1YOL013C SSE2P32590 693 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C MRPL4P36517 319 aa3.3□□□□□ -1.88
HRD1YOL013C BFR1P38934 470 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
HRD1YOL013C EPL1P43572 832 aa3.3□□□□□ -1.88
HRD1YOL013C STB2P46679 850 aa3.3□□□□□ -1.88
HRD1YOL013C EFM3P47163 339 aa3.3□□□□□ -1.88
HRD1YOL013C YGR149WP48236 432 aa3.3□□□□□ -1.88
HRD1YOL013C MSY1P48527 492 aa3.3□□□□□ -1.88
HRD1YOL013C CAF130P53280 1122 aaPredicted RBP3.3□□□□□ -1.88
HRD1YOL013C LSB1P53281 241 aa3.3□□□□□ -1.88
HRD1YOL013C RPL6AQ02326 176 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C UTP6Q02354 440 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C KAP95Q06142 861 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C ATG9Q12142 997 aa3.3□□□□□ -1.88
HRD1YOL013C TY3A-GQ12173 290 aa3.3□□□□□ -1.88
HRD1YOL013C MRPL23Q12487 163 aaPredicted RBP3.3□□□□□ -1.88
HRD1YOL013C SFG1Q12507 346 aa3.3□□□□□ -1.88
HRD1YOL013C YDL007C-AQ2V2Q0 85 aa3.3□□□□□ -1.88
HRD1YOL013C TY3A-IQ99219 290 aa3.3□□□□□ -1.88
HRD1YOL013C Q0010Q9ZZX9 128 aa3.3□□□□□ -1.88
HRD1YOL013C REV3P14284 1504 aa3.3□□□□□ -1.88
HRD1YOL013C YLR278CQ05854 1341 aa3.3□□□□□ -1.88
HRD1YOL013C VPS63O13549 108 aa3.3□□□□□ -1.88
HRD1YOL013C NUP1P20676 1076 aa3.3□□□□□ -1.88
HRD1YOL013C UBA1P22515 1024 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C FAA1P30624 700 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C NIP100P33420 868 aa3.3□□□□□ -1.88
HRD1YOL013C YBR144CP34215 104 aa3.3□□□□□ -1.88
HRD1YOL013C LAM5P43560 674 aa3.3□□□□□ -1.88
HRD1YOL013C YGL138CP53122 345 aa3.3□□□□□ -1.88
HRD1YOL013C RRP46P53256 223 aaPredicted RBP3.3□□□□□ -1.88
HRD1YOL013C COQ6P53318 479 aa3.3□□□□□ -1.88
HRD1YOL013C DCP2P53550 970 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C ARP5P53946 755 aa3.3□□□□□ -1.88
HRD1YOL013C EFM6P53970 246 aa3.3□□□□□ -1.88
HRD1YOL013C ADE16P54113 591 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C RPN9Q04062 393 aaKnown RBP3.3□□□□□ -1.88
HRD1YOL013C VPS20Q04272 221 aa3.3□□□□□ -1.88
HRD1YOL013C COQ9Q05779 260 aa3.3□□□□□ -1.88
HRD1YOL013C TGS1Q12052 315 aa3.3□□□□□ -1.88
HRD1YOL013C ICT1Q12385 394 aa3.3□□□□□ -1.88
HRD1YOL013C SAC3P46674 1301 aa3.29□□□□□ -1.88
HRD1YOL013C SCH9P11792 824 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C YPK1P12688 680 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C CLC1P17891 233 aa3.29□□□□□ -1.88
HRD1YOL013C SPO7P18410 259 aa3.29□□□□□ -1.88
HRD1YOL013C PMA2P19657 947 aa3.29□□□□□ -1.88
HRD1YOL013C PRP2P20095 876 aaPredicted RBP3.29□□□□□ -1.88
HRD1YOL013C CLN1P20437 546 aa3.29□□□□□ -1.88
HRD1YOL013C PTP1P25044 335 aa3.29□□□□□ -1.88
HRD1YOL013C PUP3P25451 205 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C CDC15P27636 974 aa3.29□□□□□ -1.88
HRD1YOL013C KEL1P38853 1164 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C YFR020WP43600 232 aa3.29□□□□□ -1.88
HRD1YOL013C BNA3P47039 444 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C DIA3P52290 468 aa3.29□□□□□ -1.88
HRD1YOL013C YIP5P53108 310 aa3.29□□□□□ -1.88
HRD1YOL013C BUD17P53727 317 aa3.29□□□□□ -1.88
HRD1YOL013C RPS15Q01855 142 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C UBP16Q02863 499 aa3.29□□□□□ -1.88
HRD1YOL013C YMR160WQ03823 816 aa3.29□□□□□ -1.88
HRD1YOL013C FIN1Q03898 291 aa3.29□□□□□ -1.88
HRD1YOL013C YDR109CQ04585 715 aa3.29□□□□□ -1.88
HRD1YOL013C GFD1Q04839 188 aaKnown RBP3.29□□□□□ -1.88
HRD1YOL013C CUR1Q06469 252 aa3.29□□□□□ -1.88
HRD1YOL013C TAF2P23255 1407 aa3.28□□□□□ -1.88
HRD1YOL013C CBP1P07252 654 aa3.28□□□□□ -1.88
HRD1YOL013C WHI2P12611 486 aa3.28□□□□□ -1.88
HRD1YOL013C COY1P34237 679 aa3.28□□□□□ -1.88
HRD1YOL013C HES1P35843 434 aa3.28□□□□□ -1.88
HRD1YOL013C HOT13P36078 116 aa3.28□□□□□ -1.88
HRD1YOL013C YPT10P38146 199 aa3.28□□□□□ -1.88
HRD1YOL013C ZTA1P38230 334 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C IMD2P38697 523 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C LNP1P38878 278 aa3.28□□□□□ -1.88
HRD1YOL013C SMC2P38989 1170 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C FUN12P39730 1002 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C ASG1P40467 964 aa3.28□□□□□ -1.88
HRD1YOL013C YJL107CP42947 387 aa3.28□□□□□ -1.88
HRD1YOL013C RPT4P53549 437 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C YNL144CP53907 740 aa3.28□□□□□ -1.88
HRD1YOL013C SKO1Q02100 647 aa3.28□□□□□ -1.88
HRD1YOL013C CWC21Q03375 135 aaKnown RBP3.28□□□□□ -1.88
HRD1YOL013C YML053CQ04978 212 aa3.28□□□□□ -1.88
HRD1YOL013C YLR413WQ06689 675 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms