RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A ATO2P32907 282 aa3.61□□□□□ -1.83
YSF3YNL138W-A RFC1P38630 861 aaKnown RBP3.61□□□□□ -1.83
YSF3YNL138W-A SLZ1P40167 298 aa3.61□□□□□ -1.83
YSF3YNL138W-A MEP3P53390 489 aa3.61□□□□□ -1.83
YSF3YNL138W-A INN1P53901 409 aa3.61□□□□□ -1.83
YSF3YNL138W-A MUB1Q03162 620 aa3.61□□□□□ -1.83
YSF3YNL138W-A YMR034CQ05131 434 aaPredicted RBP3.61□□□□□ -1.83
YSF3YNL138W-A VIP1Q06685 1146 aaKnown RBP3.61□□□□□ -1.83
YSF3YNL138W-A MEC1P38111 2368 aa3.6□□□□□ -1.83
YSF3YNL138W-A PRO3P32263 286 aaKnown RBP3.6□□□□□ -1.83
YSF3YNL138W-A SSH4P32343 579 aa3.6□□□□□ -1.83
YSF3YNL138W-A SAC1P32368 623 aaKnown RBP3.6□□□□□ -1.83
YSF3YNL138W-A LEU5P38702 357 aa3.6□□□□□ -1.83
YSF3YNL138W-A VRG4P40107 337 aa3.6□□□□□ -1.83
YSF3YNL138W-A YJR061WP40355 935 aa3.6□□□□□ -1.83
YSF3YNL138W-A YIL152WP40455 235 aa3.6□□□□□ -1.83
YSF3YNL138W-A SGF73P53165 657 aa3.6□□□□□ -1.83
YSF3YNL138W-A BOP3P53958 396 aa3.6□□□□□ -1.83
YSF3YNL138W-A ENT4Q07872 247 aa3.6□□□□□ -1.83
YSF3YNL138W-A DSE3Q08729 430 aa3.6□□□□□ -1.83
YSF3YNL138W-A RAD61Q99359 647 aa3.6□□□□□ -1.83
YSF3YNL138W-A TY1B-AO13527 1196 aaKnown RBP3.59□□□□□ -1.83
YSF3YNL138W-A HXK2P04807 486 aaKnown RBP3.59□□□□□ -1.83
YSF3YNL138W-A FUM1P08417 488 aaKnown RBP3.59□□□□□ -1.83
YSF3YNL138W-A MCM10P32354 571 aa3.59□□□□□ -1.83
YSF3YNL138W-A BUR6P40096 142 aa3.59□□□□□ -1.83
YSF3YNL138W-A ESL1P40456 1118 aa3.59□□□□□ -1.83
YSF3YNL138W-A HXT9P40885 567 aa3.59□□□□□ -1.83
YSF3YNL138W-A SIP4P46954 829 aa3.59□□□□□ -1.83
YSF3YNL138W-A LIF1P53150 421 aa3.59□□□□□ -1.83
YSF3YNL138W-A NNF2P53253 936 aa3.59□□□□□ -1.83
YSF3YNL138W-A YMR018WQ04364 514 aa3.59□□□□□ -1.83
YSF3YNL138W-A ARP9Q05123 467 aa3.59□□□□□ -1.83
YSF3YNL138W-A MLH2Q07980 695 aa3.59□□□□□ -1.83
YSF3YNL138W-A ATG9Q12142 997 aa3.59□□□□□ -1.83
YSF3YNL138W-A NBP2Q12163 236 aa3.59□□□□□ -1.83
YSF3YNL138W-A YFL068WP0CX99 160 aa3.58□□□□□ -1.84
YSF3YNL138W-A YLL066W-AP0CY00 160 aa3.58□□□□□ -1.84
YSF3YNL138W-A YLL067W-AP0CY01 160 aa3.58□□□□□ -1.84
YSF3YNL138W-A CLB2P24869 491 aa3.58□□□□□ -1.84
YSF3YNL138W-A YCR043CP25361 127 aa3.58□□□□□ -1.84
YSF3YNL138W-A MNN2P38069 597 aa3.58□□□□□ -1.84
YSF3YNL138W-A ARC40P38328 384 aaKnown RBP3.58□□□□□ -1.84
YSF3YNL138W-A YHL026CP38740 315 aa3.58□□□□□ -1.84
YSF3YNL138W-A RTS1P38903 757 aa3.58□□□□□ -1.84
YSF3YNL138W-A YMR147WP40218 223 aaKnown RBP3.58□□□□□ -1.84
YSF3YNL138W-A PKP1P40530 394 aa3.58□□□□□ -1.84
YSF3YNL138W-A DPB11P47027 764 aaPredicted RBP3.58□□□□□ -1.84
YSF3YNL138W-A AAD10P47182 288 aa3.58□□□□□ -1.84
YSF3YNL138W-A YGR266WP53326 701 aa3.58□□□□□ -1.84
YSF3YNL138W-A IST1P53843 298 aaPredicted RBP3.58□□□□□ -1.84
YSF3YNL138W-A ESBP6P53918 673 aa3.58□□□□□ -1.84
YSF3YNL138W-A SUB1P54000 292 aaKnown RBP3.58□□□□□ -1.84
YSF3YNL138W-A DIG1Q03063 452 aaKnown RBP3.58□□□□□ -1.84
YSF3YNL138W-A UTP21Q06078 939 aaPredicted RBP3.58□□□□□ -1.84
YSF3YNL138W-A MCP2Q06567 569 aa3.58□□□□□ -1.84
YSF3YNL138W-A YBR056W-AI2HB52 66 aa3.57□□□□□ -1.84
YSF3YNL138W-A VPS45P38932 577 aa3.57□□□□□ -1.84
YSF3YNL138W-A PCL6P40038 420 aa3.57□□□□□ -1.84
YSF3YNL138W-A FMS1P50264 508 aa3.57□□□□□ -1.84
YSF3YNL138W-A RAD30Q04049 632 aa3.57□□□□□ -1.84
YSF3YNL138W-A CSI1Q04368 295 aa3.57□□□□□ -1.84
YSF3YNL138W-A ARP10Q04549 284 aa3.57□□□□□ -1.84
YSF3YNL138W-A ECI1Q05871 280 aa3.57□□□□□ -1.84
YSF3YNL138W-A OPY2Q06810 360 aa3.57□□□□□ -1.84
YSF3YNL138W-A SRL1Q08673 210 aa3.57□□□□□ -1.84
YSF3YNL138W-A INP53Q12271 1107 aa3.57□□□□□ -1.84
YSF3YNL138W-A SKM1Q12469 655 aa3.57□□□□□ -1.84
YSF3YNL138W-A CSE2P33308 149 aa3.56□□□□□ -1.84
YSF3YNL138W-A MUD2P36084 527 aaKnown RBP3.56□□□□□ -1.84
YSF3YNL138W-A UTH1P36135 365 aa3.56□□□□□ -1.84
YSF3YNL138W-A MED6P38782 295 aa3.56□□□□□ -1.84
YSF3YNL138W-A YEL068CP39977 110 aa3.56□□□□□ -1.84
YSF3YNL138W-A YIL060WP40519 144 aa3.56□□□□□ -1.84
YSF3YNL138W-A TES1P41903 349 aaKnown RBP3.56□□□□□ -1.84
YSF3YNL138W-A STR3P53101 465 aaKnown RBP3.56□□□□□ -1.84
YSF3YNL138W-A BSC5P53755 489 aa3.56□□□□□ -1.84
YSF3YNL138W-A YNL234WP53857 426 aa3.56□□□□□ -1.84
YSF3YNL138W-A YSA1Q01976 231 aa3.56□□□□□ -1.84
YSF3YNL138W-A INA17Q02888 182 aa3.56□□□□□ -1.84
YSF3YNL138W-A MRD1Q06106 887 aaKnown RBP3.56□□□□□ -1.84
YSF3YNL138W-A BUD7Q08754 746 aa3.56□□□□□ -1.84
YSF3YNL138W-A BRR2P32639 2163 aaKnown RBP3.56□□□□□ -1.84
YSF3YNL138W-A CDC24P11433 854 aaPredicted RBP3.55□□□□□ -1.84
YSF3YNL138W-A RPB8P20436 146 aa3.55□□□□□ -1.84
YSF3YNL138W-A PWP1P21304 576 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A PEX34P25584 144 aa3.55□□□□□ -1.84
YSF3YNL138W-A RME1P32338 300 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A SNU114P36048 1008 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A TVP38P36164 337 aa3.55□□□□□ -1.84
YSF3YNL138W-A ANS1P38832 159 aa3.55□□□□□ -1.84
YSF3YNL138W-A MET30P39014 640 aa3.55□□□□□ -1.84
YSF3YNL138W-A ARC1P46672 376 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A SMC3P47037 1230 aa3.55□□□□□ -1.84
YSF3YNL138W-A LSC1P53598 329 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A YNL134CP53912 376 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A SVL3Q03088 825 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A YMR178WQ03219 274 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A EKI1Q03764 534 aa3.55□□□□□ -1.84
YSF3YNL138W-A ADE13Q05911 482 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms