RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS36	YLR417W	SHR3	Q02774	210 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	CTL1	Q03220	320 aa	Known RBP	4.92	□□□□□ -1.62
VPS36	YLR417W	RRP45	Q05636	305 aa	Known RBP	4.92	□□□□□ -1.62
VPS36	YLR417W	YOR365C	Q08844	703 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	MMS22	Q06164	1454 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	PEP5	P12868	1029 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	CAB3	P36076	571 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	LEU5	P38702	357 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	COS5	P47187	383 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	YGR149W	P48236	432 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	YGL138C	P53122	345 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	YGL108C	P53139	140 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	SMM1	P53720	384 aa	Known RBP	4.92	□□□□□ -1.62
VPS36	YLR417W	ERG13	P54839	491 aa	Known RBP	4.92	□□□□□ -1.62
VPS36	YLR417W	GYL1	Q04322	720 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	YDL218W	Q07629	317 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	COS7	Q07788	383 aa		4.92	□□□□□ -1.62
VPS36	YLR417W	RHO2	P06781	192 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	SNC1	P31109	117 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	AFG1	P32317	509 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	RXT2	P38255	430 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	VRG4	P40107	337 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	LCB2	P40970	561 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	YJL055W	P47044	245 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	PKP2	P53170	491 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	SKO1	Q02100	647 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	YVH1	Q02256	364 aa	Known RBP	4.91	□□□□□ -1.62
VPS36	YLR417W	RDR1	Q08904	546 aa		4.91	□□□□□ -1.62
VPS36	YLR417W	EDE1	P34216	1381 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	RAV1	P47104	1357 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	TCM62	P38228	572 aa	Known RBP	4.9	□□□□□ -1.62
VPS36	YLR417W	SEC28	P40509	296 aa	Known RBP	4.9	□□□□□ -1.62
VPS36	YLR417W	HOT1	Q03213	719 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	CRC1	Q12289	327 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	GPM3	Q12326	303 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	CTF3	Q12748	733 aa		4.9	□□□□□ -1.62
VPS36	YLR417W	XRN1	P22147	1528 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	YIM1	P28625	365 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	DUG2	P38149	878 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	BNA4	P38169	460 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	RRT2	P38332	387 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	TIF4631	P39935	952 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	YPT11	P48559	417 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	DRN1	P53255	507 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	YGR111W	P53265	400 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	SSK1	Q07084	712 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	SIL1	Q08199	421 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	SPE3	Q12074	293 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	GPH1	P06738	902 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	NAT1	P12945	854 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	PUP2	P32379	260 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	YIL024C	P40543	189 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	YJR154W	P47181	346 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	ZPR1	P53303	486 aa	Known RBP	4.89	□□□□□ -1.63
VPS36	YLR417W	PEX25	Q02969	394 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	YLR112W	Q12130	139 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	NDJ1	Q12366	352 aa		4.89	□□□□□ -1.63
VPS36	YLR417W	RAD52	P06778	471 aa	Known RBP	4.88	□□□□□ -1.63
VPS36	YLR417W	MGM1	P32266	881 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	LTV1	P34078	463 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	THI2	P38141	450 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	SLM4	P38247	162 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	RMD9	P53140	646 aa	Known RBP	4.88	□□□□□ -1.63
VPS36	YLR417W	BUD32	P53323	261 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	RHO4	Q00246	291 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	NUP100	Q02629	959 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	SEG1	Q04279	960 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	ECI1	Q05871	280 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	COQ11	Q05892	277 aa		4.88	□□□□□ -1.63
VPS36	YLR417W	IKI3	Q06706	1349 aa	Known RBP	4.87	□□□□□ -1.63
VPS36	YLR417W	HIP1	P06775	603 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	YAP1	P19880	650 aa	Known RBP	4.87	□□□□□ -1.63
VPS36	YLR417W	MSN2	P33748	704 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	ARA1	P38115	344 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	CAJ1	P39101	391 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	OCA1	P50946	238 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS36	YLR417W	ALT2	P52892	507 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	CUL3	P53202	744 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	RPT4	P53549	437 aa	Known RBP	4.87	□□□□□ -1.63
VPS36	YLR417W	ATX2	Q12067	313 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	YNL162W-A	Q3E7A8	72 aa		4.87	□□□□□ -1.63
VPS36	YLR417W	SPT7	P35177	1332 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	SRV2	P17555	526 aa	Known RBP	4.86	□□□□□ -1.63
VPS36	YLR417W	RRP7	P25368	297 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS36	YLR417W	GID7	P25569	745 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	GYP6	P32806	458 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	YMR147W	P40218	223 aa	Known RBP	4.86	□□□□□ -1.63
VPS36	YLR417W	YGR016W	P53209	190 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	YNL234W	P53857	426 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	YPL014W	Q02606	381 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	ACL4	Q03771	387 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	DCI1	Q08558	271 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	VPS54	Q12071	889 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	HSP42	Q12329	375 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	SPP41	P38904	1435 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	SUC2	P00724	532 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	DPH2	P32461	534 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	YPK3	P38070	525 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	SCO2	P38072	301 aa		4.86	□□□□□ -1.63
VPS36	YLR417W	MMR1	Q06324	491 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms