RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YCL068CP25593 260 aa6.31□□□□□ -1.4
MSP1YGR028W MGT1P26188 188 aa6.31□□□□□ -1.4
MSP1YGR028W HEM12P32347 362 aaPredicted RBP6.31□□□□□ -1.4
MSP1YGR028W SFP1P32432 683 aa6.31□□□□□ -1.4
MSP1YGR028W CNS1P33313 385 aa6.31□□□□□ -1.4
MSP1YGR028W LDB7P38210 180 aa6.31□□□□□ -1.4
MSP1YGR028W VHC1P38329 1120 aa6.31□□□□□ -1.4
MSP1YGR028W SMF1P38925 575 aa6.31□□□□□ -1.4
MSP1YGR028W LSM5P40089 93 aaKnown RBP6.31□□□□□ -1.4
MSP1YGR028W YFL012WP43580 148 aa6.31□□□□□ -1.4
MSP1YGR028W BIR1P47134 954 aa6.31□□□□□ -1.4
MSP1YGR028W EXG2P52911 562 aa6.31□□□□□ -1.4
MSP1YGR028W CPR6P53691 371 aaKnown RBP6.31□□□□□ -1.4
MSP1YGR028W EFM6P53970 246 aa6.31□□□□□ -1.4
MSP1YGR028W MTG1Q03151 367 aaPredicted RBP6.31□□□□□ -1.4
MSP1YGR028W URH1Q04179 340 aa6.31□□□□□ -1.4
MSP1YGR028W ECI1Q05871 280 aa6.31□□□□□ -1.4
MSP1YGR028W REH1Q06709 432 aa6.31□□□□□ -1.4
MSP1YGR028W BUD7Q08754 746 aa6.31□□□□□ -1.4
MSP1YGR028W YIL046W-AQ3E7Z4 54 aa6.31□□□□□ -1.4
MSP1YGR028W NSP1P14907 823 aaKnown RBP6.3□□□□□ -1.4
MSP1YGR028W BEM1P29366 551 aa6.3□□□□□ -1.4
MSP1YGR028W NRP1P32770 719 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
MSP1YGR028W PRP18P33411 251 aaPredicted RBP6.3□□□□□ -1.4
MSP1YGR028W POP4P38336 279 aa6.3□□□□□ -1.4
MSP1YGR028W DBP8P38719 431 aa6.3□□□□□ -1.4
MSP1YGR028W CCT6P39079 546 aa6.3□□□□□ -1.4
MSP1YGR028W ALG8P40351 577 aa6.3□□□□□ -1.4
MSP1YGR028W CEP3P40969 608 aa6.3□□□□□ -1.4
MSP1YGR028W YFR018CP43599 363 aa6.3□□□□□ -1.4
MSP1YGR028W OSH6Q02201 448 aa6.3□□□□□ -1.4
MSP1YGR028W UTP6Q02354 440 aaKnown RBP6.3□□□□□ -1.4
MSP1YGR028W YDR514CQ04408 483 aa6.3□□□□□ -1.4
MSP1YGR028W SML1Q04964 104 aa6.3□□□□□ -1.4
MSP1YGR028W PLB3Q08108 686 aa6.3□□□□□ -1.4
MSP1YGR028W ABF1P14164 731 aa6.29□□□□□ -1.4
MSP1YGR028W STE14P32584 239 aa6.29□□□□□ -1.4
MSP1YGR028W MRP21P38175 177 aa6.29□□□□□ -1.4
MSP1YGR028W MMS21P38632 267 aa6.29□□□□□ -1.4
MSP1YGR028W DED81P38707 554 aaKnown RBP6.29□□□□□ -1.4
MSP1YGR028W CTF8P38877 133 aa6.29□□□□□ -1.4
MSP1YGR028W SDP1P40479 209 aa6.29□□□□□ -1.4
MSP1YGR028W CFD1P40558 293 aa6.29□□□□□ -1.4
MSP1YGR028W PXA1P41909 870 aa6.29□□□□□ -1.4
MSP1YGR028W NOP15P53927 220 aaPredicted RBP6.29□□□□□ -1.4
MSP1YGR028W TGL2P54857 326 aa6.29□□□□□ -1.4
MSP1YGR028W ECM9Q02202 377 aa6.29□□□□□ -1.4
MSP1YGR028W ATP25Q03153 612 aa6.29□□□□□ -1.4
MSP1YGR028W SSL1Q04673 461 aaPredicted RBP6.29□□□□□ -1.4
MSP1YGR028W PFA4Q12006 378 aa6.29□□□□□ -1.4
MSP1YGR028W YLR125WQ12138 136 aa6.29□□□□□ -1.4
MSP1YGR028W CSF1Q12150 2958 aa6.29□□□□□ -1.4
MSP1YGR028W IMA3P0CW40 589 aa6.28□□□□□ -1.4
MSP1YGR028W IMA4P0CW41 589 aa6.28□□□□□ -1.4
MSP1YGR028W SCL1P21243 252 aaKnown RBP6.28□□□□□ -1.4
MSP1YGR028W DAL82P21705 255 aa6.28□□□□□ -1.4
MSP1YGR028W VPS34P22543 875 aa6.28□□□□□ -1.4
MSP1YGR028W YCR099CP25657 155 aa6.28□□□□□ -1.4
MSP1YGR028W SMI1P32566 505 aa6.28□□□□□ -1.4
MSP1YGR028W PIM1P36775 1133 aa6.28□□□□□ -1.4
MSP1YGR028W SEO1P39709 593 aa6.28□□□□□ -1.4
MSP1YGR028W DPH1P40487 425 aaKnown RBP6.28□□□□□ -1.4
MSP1YGR028W NMD5P46970 1048 aa6.28□□□□□ -1.4
MSP1YGR028W PET117Q02771 107 aa6.28□□□□□ -1.4
MSP1YGR028W NHX1Q04121 633 aa6.28□□□□□ -1.4
MSP1YGR028W IMA2Q08295 589 aa6.28□□□□□ -1.4
MSP1YGR028W SKM1Q12469 655 aa6.28□□□□□ -1.4
MSP1YGR028W RMD5Q12508 421 aa6.28□□□□□ -1.4
MSP1YGR028W TEF1P02994 458 aaKnown RBP6.27□□□□□ -1.41
MSP1YGR028W STE4P18851 423 aa6.27□□□□□ -1.41
MSP1YGR028W YSR3P23501 404 aa6.27□□□□□ -1.41
MSP1YGR028W GDA1P32621 518 aa6.27□□□□□ -1.41
MSP1YGR028W TFC3P34111 1160 aa6.27□□□□□ -1.41
MSP1YGR028W MAK5P38112 773 aaPredicted RBP6.27□□□□□ -1.41
MSP1YGR028W ARA1P38115 344 aa6.27□□□□□ -1.41
MSP1YGR028W YAL037WP39728 267 aa6.27□□□□□ -1.41
MSP1YGR028W YEL073CP39974 107 aa6.27□□□□□ -1.41
MSP1YGR028W NDC80P40460 691 aa6.27□□□□□ -1.41
MSP1YGR028W IME4P41833 600 aa6.27□□□□□ -1.41
MSP1YGR028W EGD1Q02642 157 aaKnown RBP6.27□□□□□ -1.41
MSP1YGR028W STP3Q05937 343 aa6.27□□□□□ -1.41
MSP1YGR028W VTA1Q06263 330 aa6.27□□□□□ -1.41
MSP1YGR028W GPR1Q12361 961 aa6.27□□□□□ -1.41
MSP1YGR028W CMD1P06787 147 aaKnown RBP6.26□□□□□ -1.41
MSP1YGR028W HSP26P15992 214 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
MSP1YGR028W CBF1P17106 351 aa6.26□□□□□ -1.41
MSP1YGR028W PHO84P25297 587 aaKnown RBP6.26□□□□□ -1.41
MSP1YGR028W URA10P30402 227 aa6.26□□□□□ -1.41
MSP1YGR028W RPD3P32561 433 aa6.26□□□□□ -1.41
MSP1YGR028W SPC29P33419 253 aa6.26□□□□□ -1.41
MSP1YGR028W PEX5P35056 612 aa6.26□□□□□ -1.41
MSP1YGR028W STB6P36085 766 aa6.26□□□□□ -1.41
MSP1YGR028W SSU1P41930 458 aa6.26□□□□□ -1.41
MSP1YGR028W HSV2P50079 448 aaPredicted RBP6.26□□□□□ -1.41
MSP1YGR028W RSC3Q06639 885 aa6.26□□□□□ -1.41
MSP1YGR028W NTO1Q12311 748 aa6.26□□□□□ -1.41
MSP1YGR028W SUL2Q12325 893 aa6.26□□□□□ -1.41
MSP1YGR028W SEM1O94742 89 aa6.25□□□□□ -1.41
MSP1YGR028W RIP1P08067 215 aa6.25□□□□□ -1.41
MSP1YGR028W FUM1P08417 488 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms