RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W CLU1Q03690 1277 aaKnown RBP5.18□□□□□ -1.58
UBP9YER098W GPI17Q04080 534 aa5.18□□□□□ -1.58
UBP9YER098W SMP3Q04174 516 aa5.18□□□□□ -1.58
UBP9YER098W YLR345WQ06137 509 aa5.18□□□□□ -1.58
UBP9YER098W YOR352WQ08816 343 aa5.18□□□□□ -1.58
UBP9YER098W RSA1Q08932 381 aa5.18□□□□□ -1.58
UBP9YER098W RKM1Q08961 583 aaPredicted RBP5.18□□□□□ -1.58
UBP9YER098W YDL177CQ12257 170 aa5.18□□□□□ -1.58
UBP9YER098W YML002WP0CF17 737 aa5.17□□□□□ -1.58
UBP9YER098W PMS1P14242 873 aa5.17□□□□□ -1.58
UBP9YER098W RPS5P26783 225 aaKnown RBP5.17□□□□□ -1.58
UBP9YER098W ACH1P32316 526 aa5.17□□□□□ -1.58
UBP9YER098W BCS1P32839 456 aa5.17□□□□□ -1.58
UBP9YER098W RPT5P33297 434 aaKnown RBP5.17□□□□□ -1.58
UBP9YER098W COY1P34237 679 aa5.17□□□□□ -1.58
UBP9YER098W TIF5P38431 405 aaKnown RBP5.17□□□□□ -1.58
UBP9YER098W LCP5P40079 357 aaPredicted RBP5.17□□□□□ -1.58
UBP9YER098W PCI8P40512 444 aa5.17□□□□□ -1.58
UBP9YER098W FKH2P41813 862 aa5.17□□□□□ -1.58
UBP9YER098W AAD10P47182 288 aa5.17□□□□□ -1.58
UBP9YER098W ASE1P50275 885 aa5.17□□□□□ -1.58
UBP9YER098W VPS62P53285 467 aa5.17□□□□□ -1.58
UBP9YER098W RSM28Q03430 361 aa5.17□□□□□ -1.58
UBP9YER098W YDL073WQ07454 984 aa5.17□□□□□ -1.58
UBP9YER098W SOD2P00447 233 aa5.17□□□□□ -1.58
UBP9YER098W ICL1P28240 557 aaPredicted RBP5.17□□□□□ -1.58
UBP9YER098W HIR2P32480 875 aa5.17□□□□□ -1.58
UBP9YER098W DSS4P32601 143 aa5.17□□□□□ -1.58
UBP9YER098W RXT2P38255 430 aa5.17□□□□□ -1.58
UBP9YER098W TDP1P38319 544 aa5.17□□□□□ -1.58
UBP9YER098W FMO1P38866 432 aa5.17□□□□□ -1.58
UBP9YER098W PFK26P40433 827 aaKnown RBP5.17□□□□□ -1.58
UBP9YER098W YJL107CP42947 387 aa5.17□□□□□ -1.58
UBP9YER098W LSB3P43603 459 aaKnown RBP5.17□□□□□ -1.58
UBP9YER098W RMR1P53060 241 aa5.17□□□□□ -1.58
UBP9YER098W CTF4Q01454 927 aa5.17□□□□□ -1.58
UBP9YER098W UBP16Q02863 499 aa5.17□□□□□ -1.58
UBP9YER098W NUS1Q12063 375 aa5.17□□□□□ -1.58
UBP9YER098W YOL159C-AQ3E769 90 aa5.17□□□□□ -1.58
UBP9YER098W CHO2P05374 869 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W ILV2P07342 687 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W ATR1P13090 542 aa5.16□□□□□ -1.58
UBP9YER098W CBF1P17106 351 aa5.16□□□□□ -1.58
UBP9YER098W VPS34P22543 875 aa5.16□□□□□ -1.58
UBP9YER098W YJU2P28320 278 aaPredicted RBP5.16□□□□□ -1.58
UBP9YER098W YEL057CP39983 233 aa5.16□□□□□ -1.58
UBP9YER098W JHD1P40034 492 aa5.16□□□□□ -1.58
UBP9YER098W ALB1P47019 175 aaPredicted RBP5.16□□□□□ -1.58
UBP9YER098W NGL2Q03264 515 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W BUD22Q04347 519 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W DCS1Q06151 350 aa5.16□□□□□ -1.58
UBP9YER098W YEH2Q07950 538 aa5.16□□□□□ -1.58
UBP9YER098W GRX6Q12438 231 aa5.16□□□□□ -1.58
UBP9YER098W ERG27Q12452 347 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W CYB2P00175 591 aa5.16□□□□□ -1.58
UBP9YER098W PGK1P00560 416 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W PET494P07390 489 aaPredicted RBP5.16□□□□□ -1.58
UBP9YER098W SNT1P25357 1226 aa5.16□□□□□ -1.58
UBP9YER098W KRR1P25586 316 aaPredicted RBP5.16□□□□□ -1.58
UBP9YER098W POL4P25615 582 aa5.16□□□□□ -1.58
UBP9YER098W MAM33P40513 266 aa5.16□□□□□ -1.58
UBP9YER098W MDE1P47095 244 aa5.16□□□□□ -1.58
UBP9YER098W VMA10P48836 114 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W SGF73P53165 657 aa5.16□□□□□ -1.58
UBP9YER098W CRF1Q04930 467 aa5.16□□□□□ -1.58
UBP9YER098W SSQ1Q05931 657 aaPredicted RBP5.16□□□□□ -1.58
UBP9YER098W YPR202WQ08993 238 aa5.16□□□□□ -1.58
UBP9YER098W ATG29Q12092 213 aa5.16□□□□□ -1.58
UBP9YER098W LYS21Q12122 440 aaKnown RBP5.16□□□□□ -1.58
UBP9YER098W SEN2P16658 377 aa5.15□□□□□ -1.58
UBP9YER098W RRT12P25381 491 aa5.15□□□□□ -1.58
UBP9YER098W KAR4P25583 335 aa5.15□□□□□ -1.58
UBP9YER098W AAD3P25612 363 aa5.15□□□□□ -1.58
UBP9YER098W CAP1P28495 268 aaKnown RBP5.15□□□□□ -1.58
UBP9YER098W PRR1P28708 518 aa5.15□□□□□ -1.58
UBP9YER098W YKL023WP36103 277 aaKnown RBP5.15□□□□□ -1.58
UBP9YER098W APD1P38281 316 aa5.15□□□□□ -1.58
UBP9YER098W DIM1P41819 318 aaKnown RBP5.15□□□□□ -1.58
UBP9YER098W YJL055WP47044 245 aa5.15□□□□□ -1.58
UBP9YER098W YJR054WP47114 497 aa5.15□□□□□ -1.58
UBP9YER098W GLO1P50107 326 aa5.15□□□□□ -1.58
UBP9YER098W SNO2P53823 222 aa5.15□□□□□ -1.58
UBP9YER098W INN1P53901 409 aa5.15□□□□□ -1.58
UBP9YER098W YPL034WQ03083 165 aa5.15□□□□□ -1.58
UBP9YER098W TAF12Q03761 539 aa5.15□□□□□ -1.58
UBP9YER098W YDR239CQ03780 787 aa5.15□□□□□ -1.58
UBP9YER098W DUS4Q06063 367 aa5.15□□□□□ -1.58
UBP9YER098W SKG3Q06315 1026 aa5.15□□□□□ -1.58
UBP9YER098W YLR462WO13556 202 aa5.14□□□□□ -1.59
UBP9YER098W RPN13O13563 156 aa5.14□□□□□ -1.59
UBP9YER098W COR1P07256 457 aa5.14□□□□□ -1.59
UBP9YER098W TFB1P32776 642 aa5.14□□□□□ -1.59
UBP9YER098W MRX3P38172 270 aa5.14□□□□□ -1.59
UBP9YER098W RCK2P38623 610 aa5.14□□□□□ -1.59
UBP9YER098W YHL049CP38722 271 aa5.14□□□□□ -1.59
UBP9YER098W MEF2P39677 819 aa5.14□□□□□ -1.59
UBP9YER098W PES4P39684 611 aa5.14□□□□□ -1.59
UBP9YER098W YEL075CP39972 122 aa5.14□□□□□ -1.59
UBP9YER098W YER189WP40104 122 aa5.14□□□□□ -1.59
UBP9YER098W SLZ1P40167 298 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms