RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	NBP35	P52920	328 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	RSC1	P53236	928 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	KTR6	P54070	446 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	ELP3	Q02908	557 aa	Known RBP	4.29	□□□□□ -1.72
UBC8	YEL012W	TRM82	Q03774	444 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	ARA2	Q04212	335 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	YML096W	Q04489	525 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	UFO1	Q04511	668 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	AIM6	Q07716	390 aa		4.29	□□□□□ -1.72
UBC8	YEL012W	GPA1	P08539	472 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	MIS1	P09440	975 aa	Known RBP	4.28	□□□□□ -1.72
UBC8	YEL012W	KAR3	P17119	729 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	MET16	P18408	261 aa	Predicted RBP	4.28	□□□□□ -1.72
UBC8	YEL012W	VPS34	P22543	875 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	SRB2	P34162	210 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	DHR2	P36009	735 aa	Predicted RBP	4.28	□□□□□ -1.72
UBC8	YEL012W	MRPL40	P36534	297 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	IFA38	P38286	347 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	YER130C	P39959	443 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	MIT1	P40002	666 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	ARB1	P40024	610 aa	Known RBP	4.28	□□□□□ -1.72
UBC8	YEL012W	ARG2	P40360	574 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	IML2	P47031	731 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	RTT101	P47050	842 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	COG7	P53195	279 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	MRPL13	Q02204	264 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	TAF3	Q12297	353 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	SUL2	Q12325	893 aa		4.28	□□□□□ -1.72
UBC8	YEL012W	YCR061W	P25639	631 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	CNE1	P27825	502 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	SSH4	P32343	579 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	YPT10	P38146	199 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	YJL070C	P40361	888 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	CAB2	P40506	365 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	DSN1	P40568	576 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	SNG1	P46950	547 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	PHO86	P46956	311 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	YIP4	P53093	235 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	YGR266W	P53326	701 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	ESF2	P53743	316 aa	Known RBP	4.27	□□□□□ -1.73
UBC8	YEL012W	CSL4	P53859	292 aa	Predicted RBP	4.27	□□□□□ -1.73
UBC8	YEL012W	BET4	Q00618	327 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	YPL113C	Q02961	396 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	THI20	Q08224	551 aa		4.27	□□□□□ -1.73
UBC8	YEL012W	DAL82	P21705	255 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	BRF1	P29056	596 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	PMT1	P33775	817 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	YKT6	P36015	200 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	GMH1	P36125	273 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	APL3	P38065	1025 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	FSH1	P38777	243 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	CTM1	P38818	585 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	EDC3	P39998	551 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	PAN6	P40459	309 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	SMK1	P41808	388 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	COS5	P47187	383 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	YPT11	P48559	417 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	ASN2	P49090	572 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	COP1	P53622	1201 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	BUD17	P53727	317 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	PRM1	P53835	661 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	YNL092W	P53934	400 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	VAC7	P53950	1165 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	EBS1	Q03466	884 aa	Known RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	YDR179W-A	Q03983	463 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	COG4	Q06096	861 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	ATG10	Q07879	167 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	YLR012C	Q07927	99 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	APC5	Q08683	685 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	CLP1	Q08685	445 aa	Predicted RBP	4.26	□□□□□ -1.73
UBC8	YEL012W	ACF2	Q12168	779 aa		4.26	□□□□□ -1.73
UBC8	YEL012W	BI2	P03873	423 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	CDC33	P07260	213 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	SPT15	P13393	240 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	MCM10	P32354	571 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	CDC5	P32562	705 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	RRN3	P36070	627 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	GLG1	P36143	616 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	SDH8	P38345	138 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	RRP3	P38712	501 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	NPR3	P38742	1146 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	AXL2	P38928	823 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	BDH2	P39713	417 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	ASG1	P40467	964 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	IDS2	P46958	469 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	TRF5	P48561	642 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	MEP3	P53390	489 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	VID22	Q05934	901 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	RPN8	Q08723	338 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	NEW1	Q08972	1196 aa	Known RBP	4.25	□□□□□ -1.73
UBC8	YEL012W	TRM8	Q12009	286 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	PEX11	Q12462	236 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	BI3	Q9ZZW7	517 aa		4.25	□□□□□ -1.73
UBC8	YEL012W	HIS1	P00498	297 aa	Known RBP	4.24	□□□□□ -1.73
UBC8	YEL012W	CDC37	P06101	506 aa	Known RBP	4.24	□□□□□ -1.73
UBC8	YEL012W	GUK1	P15454	187 aa	Known RBP	4.24	□□□□□ -1.73
UBC8	YEL012W	ADY2	P25613	283 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	CWP1	P28319	239 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	YET1	P35723	206 aa		4.24	□□□□□ -1.73
UBC8	YEL012W	TMA108	P40462	946 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms