RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W RPS17AP02407 136 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W CDC36P06100 191 aaPredicted RBP2.16□□□□□ -2.06
UBP1YDL122W VAS1P07806 1104 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W ILS1P09436 1072 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W YEL076C-AP0CX16 216 aa2.16□□□□□ -2.06
UBP1YDL122W YLR464WP0CX17 216 aa2.16□□□□□ -2.06
UBP1YDL122W ADH4P10127 382 aa2.16□□□□□ -2.06
UBP1YDL122W RPS17BP14127 136 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W FUR1P18562 216 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W CBP3P21560 335 aa2.16□□□□□ -2.06
UBP1YDL122W CMK1P27466 446 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W YJU2P28320 278 aaPredicted RBP2.16□□□□□ -2.06
UBP1YDL122W RPD3P32561 433 aa2.16□□□□□ -2.06
UBP1YDL122W MUD1P32605 298 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W YMC2P38087 329 aa2.16□□□□□ -2.06
UBP1YDL122W YHR033WP38690 423 aa2.16□□□□□ -2.06
UBP1YDL122W BEM4P39011 633 aa2.16□□□□□ -2.06
UBP1YDL122W SSP120P39931 234 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W YEL076CP39971 216 aa2.16□□□□□ -2.06
UBP1YDL122W VHR1P40522 640 aa2.16□□□□□ -2.06
UBP1YDL122W UPF3P48412 387 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W RIM8P53179 542 aa2.16□□□□□ -2.06
UBP1YDL122W CPR6P53691 371 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W IPI3P53877 555 aa2.16□□□□□ -2.06
UBP1YDL122W YMR210WQ03649 449 aa2.16□□□□□ -2.06
UBP1YDL122W CCE1Q03702 353 aa2.16□□□□□ -2.06
UBP1YDL122W SPG3Q04398 127 aaPredicted RBP2.16□□□□□ -2.06
UBP1YDL122W XYL2Q07993 356 aa2.16□□□□□ -2.06
UBP1YDL122W YOR338WQ99326 363 aa2.16□□□□□ -2.06
UBP1YDL122W CCW14O13547 238 aa2.15□□□□□ -2.07
UBP1YDL122W NCP1P16603 691 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W SGV1P23293 657 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W PHO84P25297 587 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W HIR2P32480 875 aa2.15□□□□□ -2.07
UBP1YDL122W VMA8P32610 256 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W SKN1P33336 771 aa2.15□□□□□ -2.07
UBP1YDL122W MRPL36P36531 177 aa2.15□□□□□ -2.07
UBP1YDL122W SPC97P38863 823 aa2.15□□□□□ -2.07
UBP1YDL122W YHR210CP38893 341 aa2.15□□□□□ -2.07
UBP1YDL122W STN1P38960 494 aa2.15□□□□□ -2.07
UBP1YDL122W PUG1P40100 303 aa2.15□□□□□ -2.07
UBP1YDL122W DPH1P40487 425 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W PAN2P53010 1115 aaPredicted RBP2.15□□□□□ -2.07
UBP1YDL122W MRPL22P53881 309 aa2.15□□□□□ -2.07
UBP1YDL122W CBK1P53894 756 aa2.15□□□□□ -2.07
UBP1YDL122W RPA49Q01080 415 aaPredicted RBP2.15□□□□□ -2.07
UBP1YDL122W NUP53Q03790 475 aa2.15□□□□□ -2.07
UBP1YDL122W TDA9Q04545 1251 aa2.15□□□□□ -2.07
UBP1YDL122W YLR287CQ05881 355 aa2.15□□□□□ -2.07
UBP1YDL122W TEN1Q07921 160 aa2.15□□□□□ -2.07
UBP1YDL122W DIN7Q12086 430 aa2.15□□□□□ -2.07
UBP1YDL122W SCM3Q12334 223 aa2.15□□□□□ -2.07
UBP1YDL122W HSH49Q99181 213 aaPredicted RBP2.15□□□□□ -2.07
UBP1YDL122W SOD2P00447 233 aa2.15□□□□□ -2.07
UBP1YDL122W CPA2P03965 1118 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W GUK1P15454 187 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W RNR1P21524 888 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W CLB4P24871 460 aa2.15□□□□□ -2.07
UBP1YDL122W RKM3P38222 552 aa2.15□□□□□ -2.07
UBP1YDL122W YBR053CP38235 358 aa2.15□□□□□ -2.07
UBP1YDL122W MIP6P38760 659 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W VFA1P40080 203 aa2.15□□□□□ -2.07
UBP1YDL122W IMA5P40884 581 aa2.15□□□□□ -2.07
UBP1YDL122W JHD2P47156 728 aaPredicted RBP2.15□□□□□ -2.07
UBP1YDL122W ZRG17P53735 605 aa2.15□□□□□ -2.07
UBP1YDL122W RTC4P53850 401 aa2.15□□□□□ -2.07
UBP1YDL122W MRPL19P53875 158 aa2.15□□□□□ -2.07
UBP1YDL122W MEH1Q02205 184 aa2.15□□□□□ -2.07
UBP1YDL122W RCF1Q03713 159 aa2.15□□□□□ -2.07
UBP1YDL122W ARA2Q04212 335 aa2.15□□□□□ -2.07
UBP1YDL122W YDR109CQ04585 715 aa2.15□□□□□ -2.07
UBP1YDL122W RRP45Q05636 305 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W HBT1Q07653 1046 aaKnown RBP2.15□□□□□ -2.07
UBP1YDL122W RIM20Q12033 661 aa2.15□□□□□ -2.07
UBP1YDL122W TGL5Q12043 749 aa2.15□□□□□ -2.07
UBP1YDL122W TPO4Q12256 659 aa2.15□□□□□ -2.07
UBP1YDL122W Q0297Q9ZZV8 51 aa2.15□□□□□ -2.07
UBP1YDL122W SEM1O94742 89 aa2.14□□□□□ -2.07
UBP1YDL122W ACO1P19414 778 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UBP1YDL122W PRP2P20095 876 aaPredicted RBP2.14□□□□□ -2.07
UBP1YDL122W MF(ALPHA)2P32435 120 aa2.14□□□□□ -2.07
UBP1YDL122W SRP101P32916 621 aa2.14□□□□□ -2.07
UBP1YDL122W DHR2P36009 735 aaPredicted RBP2.14□□□□□ -2.07
UBP1YDL122W KAP104P38217 918 aaKnown RBP2.14□□□□□ -2.07
UBP1YDL122W RFC5P38251 354 aa2.14□□□□□ -2.07
UBP1YDL122W RPH1P39956 796 aa2.14□□□□□ -2.07
UBP1YDL122W YEL057CP39983 233 aa2.14□□□□□ -2.07
UBP1YDL122W YER010CP40011 234 aa2.14□□□□□ -2.07
UBP1YDL122W PRE6P40303 254 aaKnown RBP2.14□□□□□ -2.07
UBP1YDL122W RIC1P40395 1056 aa2.14□□□□□ -2.07
UBP1YDL122W CTK3P46963 296 aaPredicted RBP2.14□□□□□ -2.07
UBP1YDL122W SSY5P47002 699 aa2.14□□□□□ -2.07
UBP1YDL122W MTR3P48240 250 aaPredicted RBP2.14□□□□□ -2.07
UBP1YDL122W RAD17P48581 401 aa2.14□□□□□ -2.07
UBP1YDL122W EXG2P52911 562 aa2.14□□□□□ -2.07
UBP1YDL122W EMC4P53073 190 aa2.14□□□□□ -2.07
UBP1YDL122W TRM112P53738 135 aaPredicted RBP2.14□□□□□ -2.07
UBP1YDL122W ALF1P53904 254 aa2.14□□□□□ -2.07
UBP1YDL122W YKU80Q04437 629 aa2.14□□□□□ -2.07
UBP1YDL122W ADH6Q04894 360 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms