RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	VPS74	Q06385	345 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	YOL019W	Q08157	551 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	ACM1	Q08981	209 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	TMA46	Q12000	345 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	YTM1	Q12024	460 aa	Predicted RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	EMP46	Q12396	444 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	CBP6	P07253	162 aa	Predicted RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	CHS1	P08004	1131 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	YCL049C	P25577	312 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	PEX3	P28795	441 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	SEC1	P30619	724 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	SER1	P33330	395 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	PPS1	P38148	807 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	CDS1	P38221	457 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	WSS1	P38838	269 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	PZF1	P39933	429 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	RRN7	P40992	514 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	SMK1	P41808	388 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	FAR7	P43592	221 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	IRC7	P43623	340 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	YJR111C	P47148	283 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	GTO1	P48239	356 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	PUS4	P48567	403 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	AMA1	P50082	593 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	CWC25	P53854	179 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	RNY1	Q02933	434 aa	Known RBP	4.99	□□□□□ -1.61
TUP1	YCR084C	RUB1	Q03919	77 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	YLR297W	Q05899	129 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	MUM3	Q08750	479 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	LDB19	Q12502	818 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	ARP6	Q12509	438 aa		4.99	□□□□□ -1.61
TUP1	YCR084C	YIL177C	P40434	1758 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	YJL225C	P40889	1758 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	GCR1	P07261	785 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	FUM1	P08417	488 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	ATR1	P13090	542 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	RPB10	P22139	70 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	URE2	P23202	354 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	PEX1	P24004	1043 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	CTR86	P25355	563 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	ISF1	P32488	338 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	BCK2	P33306	851 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	SLC1	P33333	303 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	BDF1	P35817	686 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	VBA5	P36172	582 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	ERG7	P38604	731 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	TRM5	P38793	499 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	LNP1	P38878	278 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	LYS9	P38999	446 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	VAB2	P40003	282 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	AVT6	P40074	448 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	GZF3	P42944	551 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	EMC2	P47133	292 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	IBA57	P47158	497 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	EFM3	P47163	339 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	SEH1	P53011	349 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	CDC55	Q00362	526 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	REC102	Q02721	264 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	YMR265C	Q03508	461 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	YMR010W	Q03687	405 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	GPI17	Q04080	534 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	FMP42	Q04991	504 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	YLL007C	Q07799	665 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	GSH2	Q08220	491 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	NBA1	Q08229	501 aa	Known RBP	4.98	□□□□□ -1.61
TUP1	YCR084C	SGO1	Q08490	590 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	SWT1	Q12104	458 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	YDR262W	Q12331	272 aa		4.98	□□□□□ -1.61
TUP1	YCR084C	NUC1	P08466	329 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	TOP3	P13099	656 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	HOP1	P20050	605 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	PTP1	P25044	335 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YCR061W	P25639	631 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	RPT3	P33298	428 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	MAC1	P35192	417 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YKL070W	P36087	169 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	PFF1	P38244	976 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	AIM3	P38266	947 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	CKB2	P38930	258 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	CHS6	P40955	746 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	PTK2	P47116	818 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	YJR154W	P47181	346 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YGL108C	P53139	140 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	SSU72	P53538	206 aa	Predicted RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	TEP1	P53916	434 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TUP1	YCR084C	SHR3	Q02774	210 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YDR248C	Q03786	193 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	GIS4	Q04233	774 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	MRPL1	Q04599	285 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	DXO1	Q06349	442 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	XYL2	Q07993	356 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	SET6	Q12529	373 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	VCX1	Q99385	411 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	FAS2	P19097	1887 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	ILV2	P07342	687 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	RNR1	P21524	888 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	KIN3	P22209	435 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	HXT3	P32466	567 aa	Known RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	GCD11	P32481	527 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 134.6 ms