RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MNN5P46982 586 aa7.04□□□□□ -1.28
TOD6YBL054W EFM5P53200 248 aaKnown RBP7.04□□□□□ -1.28
TOD6YBL054W NQM1P53228 333 aaPredicted RBP7.04□□□□□ -1.28
TOD6YBL054W DAM1P53267 343 aa7.04□□□□□ -1.28
TOD6YBL054W IBD2P53892 351 aa7.04□□□□□ -1.28
TOD6YBL054W NGL2Q03264 515 aaKnown RBP7.04□□□□□ -1.28
TOD6YBL054W TRS31Q03337 283 aa7.04□□□□□ -1.28
TOD6YBL054W ENT5Q03769 411 aaKnown RBP7.04□□□□□ -1.28
TOD6YBL054W HEL2Q05580 639 aaKnown RBP7.04□□□□□ -1.28
TOD6YBL054W GRS2Q06817 618 aa7.04□□□□□ -1.28
TOD6YBL054W NBA1Q08229 501 aaKnown RBP7.04□□□□□ -1.28
TOD6YBL054W YNG1Q08465 219 aa7.04□□□□□ -1.28
TOD6YBL054W NBP2Q12163 236 aa7.04□□□□□ -1.28
TOD6YBL054W YOR214CQ12282 236 aa7.04□□□□□ -1.28
TOD6YBL054W YKL018C-AQ3E7A7 99 aa7.04□□□□□ -1.28
TOD6YBL054W RPS9AO13516 197 aaKnown RBP7.03□□□□□ -1.28
TOD6YBL054W BEM1P29366 551 aa7.03□□□□□ -1.28
TOD6YBL054W YGL015CP33199 130 aa7.03□□□□□ -1.28
TOD6YBL054W CAF4P36130 643 aa7.03□□□□□ -1.28
TOD6YBL054W MRPL7P36519 292 aa7.03□□□□□ -1.28
TOD6YBL054W MRP21P38175 177 aa7.03□□□□□ -1.28
TOD6YBL054W REG2P38232 338 aa7.03□□□□□ -1.28
TOD6YBL054W GRE3P38715 327 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
TOD6YBL054W LSM12P38828 187 aaKnown RBP7.03□□□□□ -1.28
TOD6YBL054W BUD13P46947 266 aaPredicted RBP7.03□□□□□ -1.28
TOD6YBL054W IRC18P47056 224 aa7.03□□□□□ -1.28
TOD6YBL054W ACF4P47129 309 aa7.03□□□□□ -1.28
TOD6YBL054W COG1P53079 417 aa7.03□□□□□ -1.28
TOD6YBL054W PEX31P53203 462 aa7.03□□□□□ -1.28
TOD6YBL054W PEX13P80667 386 aa7.03□□□□□ -1.28
TOD6YBL054W REG1Q00816 1014 aa7.03□□□□□ -1.28
TOD6YBL054W RLI1Q03195 608 aaKnown RBP7.03□□□□□ -1.28
TOD6YBL054W HER2Q03557 464 aa7.03□□□□□ -1.28
TOD6YBL054W TAF12Q03761 539 aa7.03□□□□□ -1.28
TOD6YBL054W BSC2Q05611 235 aa7.03□□□□□ -1.28
TOD6YBL054W SWA2Q06677 668 aa7.03□□□□□ -1.28
TOD6YBL054W UBX5Q06682 500 aa7.03□□□□□ -1.28
TOD6YBL054W PEX27Q08580 376 aa7.03□□□□□ -1.28
TOD6YBL054W TRE2Q08693 809 aa7.03□□□□□ -1.28
TOD6YBL054W YOR022CQ12204 715 aa7.03□□□□□ -1.28
TOD6YBL054W RPN6Q12377 434 aa7.03□□□□□ -1.28
TOD6YBL054W THI4P32318 326 aa7.03□□□□□ -1.28
TOD6YBL054W UTR4P32626 227 aa7.03□□□□□ -1.28
TOD6YBL054W PTM1P32857 523 aa7.03□□□□□ -1.28
TOD6YBL054W TOD6P34219 525 aa7.03□□□□□ -1.28
TOD6YBL054W ZRT3P34240 503 aa7.03□□□□□ -1.28
TOD6YBL054W RIB1P38066 345 aa7.03□□□□□ -1.28
TOD6YBL054W AGP2P38090 596 aa7.03□□□□□ -1.28
TOD6YBL054W MSC7P38694 644 aa7.03□□□□□ -1.28
TOD6YBL054W MUP3P38734 546 aa7.03□□□□□ -1.28
TOD6YBL054W YHR054CP38780 354 aa7.03□□□□□ -1.28
TOD6YBL054W RSC30P38781 883 aa7.03□□□□□ -1.28
TOD6YBL054W SFB3P38810 929 aa7.03□□□□□ -1.28
TOD6YBL054W YER034WP40022 185 aaKnown RBP7.03□□□□□ -1.28
TOD6YBL054W RGI1P40043 161 aaPredicted RBP7.03□□□□□ -1.28
TOD6YBL054W PFD1P46988 109 aa7.03□□□□□ -1.28
TOD6YBL054W MRH4P53166 561 aa7.03□□□□□ -1.28
TOD6YBL054W YNL018CP53976 612 aa7.03□□□□□ -1.28
TOD6YBL054W SLG1P54867 378 aa7.03□□□□□ -1.28
TOD6YBL054W SKY1Q03656 742 aa7.03□□□□□ -1.28
TOD6YBL054W YDR131CQ03899 556 aa7.03□□□□□ -1.28
TOD6YBL054W DCS1Q06151 350 aa7.03□□□□□ -1.28
TOD6YBL054W RIF2Q06208 395 aa7.03□□□□□ -1.28
TOD6YBL054W JLP1Q12358 412 aa7.03□□□□□ -1.28
TOD6YBL054W WTM1Q12363 437 aaKnown RBP7.03□□□□□ -1.28
TOD6YBL054W RPS4AP0CX35 261 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W RPS4BP0CX36 261 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W APE1P14904 514 aa7.02□□□□□ -1.29
TOD6YBL054W TKL1P23254 680 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W AAT2P23542 418 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W LRE1P25579 583 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W SKT5P34226 696 aa7.02□□□□□ -1.29
TOD6YBL054W RIM4P38741 713 aa7.02□□□□□ -1.29
TOD6YBL054W MLH1P38920 769 aa7.02□□□□□ -1.29
TOD6YBL054W NAB3P38996 802 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
TOD6YBL054W PCL6P40038 420 aa7.02□□□□□ -1.29
TOD6YBL054W COG3P40094 801 aa7.02□□□□□ -1.29
TOD6YBL054W SOK1P40317 901 aa7.02□□□□□ -1.29
TOD6YBL054W YIR007WP40566 764 aa7.02□□□□□ -1.29
TOD6YBL054W NUP85P46673 744 aa7.02□□□□□ -1.29
TOD6YBL054W RPS10BP46784 105 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W ROM1P53046 1155 aa7.02□□□□□ -1.29
TOD6YBL054W YGR168CP53293 376 aa7.02□□□□□ -1.29
TOD6YBL054W VAC7P53950 1165 aa7.02□□□□□ -1.29
TOD6YBL054W SDH1Q00711 640 aa7.02□□□□□ -1.29
TOD6YBL054W CWC21Q03375 135 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W NHP10Q03435 203 aa7.02□□□□□ -1.29
TOD6YBL054W YMR010WQ03687 405 aa7.02□□□□□ -1.29
TOD6YBL054W SEG1Q04279 960 aa7.02□□□□□ -1.29
TOD6YBL054W RCO1Q04779 684 aa7.02□□□□□ -1.29
TOD6YBL054W YHC1Q05900 231 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W YLR345WQ06137 509 aa7.02□□□□□ -1.29
TOD6YBL054W CDD1Q06549 142 aa7.02□□□□□ -1.29
TOD6YBL054W YDL073WQ07454 984 aa7.02□□□□□ -1.29
TOD6YBL054W AAD4Q07747 329 aa7.02□□□□□ -1.29
TOD6YBL054W RPS10AQ08745 105 aaPredicted RBP7.02□□□□□ -1.29
TOD6YBL054W GPM2Q12008 311 aa7.02□□□□□ -1.29
TOD6YBL054W MDM32Q12171 622 aa7.02□□□□□ -1.29
TOD6YBL054W AHA1Q12449 350 aaKnown RBP7.02□□□□□ -1.29
TOD6YBL054W LAG2Q92325 660 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms