RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 SMC3P47037 1230 aa-0.33□□□□□ -2.46
snR47snR47 PMT3P47190 753 aa-0.33□□□□□ -2.46
snR47snR47 BIO3P50277 480 aa-0.33□□□□□ -2.46
snR47snR47 NNF2P53253 936 aa-0.33□□□□□ -2.46
snR47snR47 MRPS16Q02608 121 aa-0.33□□□□□ -2.46
snR47snR47 POB3Q04636 552 aaKnown RBP-0.33□□□□□ -2.46
snR47snR47 ECM38Q05902 660 aaPredicted RBP-0.33□□□□□ -2.46
snR47snR47 PSF3Q12146 194 aa-0.33□□□□□ -2.46
snR47snR47 RKM5Q12367 367 aa-0.33□□□□□ -2.46
snR47snR47 PUT2P07275 575 aa-0.34□□□□□ -2.46
snR47snR47 YCR007CP25354 239 aa-0.34□□□□□ -2.46
snR47snR47 MNS1P32906 549 aa-0.34□□□□□ -2.46
snR47snR47 STB6P36085 766 aa-0.34□□□□□ -2.46
snR47snR47 PAM1P37304 830 aaKnown RBP-0.34□□□□□ -2.46
snR47snR47 MIX23P38162 196 aa-0.34□□□□□ -2.46
snR47snR47 AIM10P39965 576 aaKnown RBP-0.34□□□□□ -2.46
snR47snR47 YJR030CP47101 745 aa-0.34□□□□□ -2.46
snR47snR47 MDG1P53885 366 aa-0.34□□□□□ -2.46
snR47snR47 ZDS2P54786 942 aa-0.34□□□□□ -2.46
snR47snR47 YPR096CO13587 100 aa-0.35□□□□□ -2.47
snR47snR47 NFT1P0CE68 1218 aa-0.35□□□□□ -2.47
snR47snR47 TAF5P38129 798 aa-0.35□□□□□ -2.47
snR47snR47 ROT2P38138 954 aa-0.35□□□□□ -2.47
snR47snR47 PKP1P40530 394 aa-0.35□□□□□ -2.47
snR47snR47 GCD10P41814 478 aa-0.35□□□□□ -2.47
snR47snR47 ART5P53244 586 aaKnown RBP-0.35□□□□□ -2.47
snR47snR47 YPL107WQ02873 248 aa-0.35□□□□□ -2.47
snR47snR47 MUB1Q03162 620 aa-0.35□□□□□ -2.47
snR47snR47 SLD5Q03406 294 aa-0.35□□□□□ -2.47
snR47snR47 CRN1Q06440 651 aa-0.35□□□□□ -2.47
snR47snR47 SDH5Q08230 162 aa-0.35□□□□□ -2.47
snR47snR47 PLP2Q12017 286 aa-0.35□□□□□ -2.47
snR47snR47 ADH3P07246 375 aaKnown RBP-0.36□□□□□ -2.47
snR47snR47 DAL3P32459 195 aa-0.36□□□□□ -2.47
snR47snR47 SPT10P35208 640 aa-0.36□□□□□ -2.47
snR47snR47 UME6P39001 836 aa-0.36□□□□□ -2.47
snR47snR47 FRT2P39734 528 aa-0.36□□□□□ -2.47
snR47snR47 FAU1P40099 211 aa-0.36□□□□□ -2.47
snR47snR47 SSU1P41930 458 aa-0.36□□□□□ -2.47
snR47snR47 RPS10BP46784 105 aaKnown RBP-0.36□□□□□ -2.47
snR47snR47 PGU1P47180 361 aa-0.36□□□□□ -2.47
snR47snR47 MTM1P53320 366 aa-0.36□□□□□ -2.47
snR47snR47 GOR1P53839 350 aa-0.36□□□□□ -2.47
snR47snR47 IST1P53843 298 aaPredicted RBP-0.36□□□□□ -2.47
snR47snR47 CBK1P53894 756 aa-0.36□□□□□ -2.47
snR47snR47 HXT11P54862 567 aa-0.36□□□□□ -2.47
snR47snR47 ATG9Q12142 997 aa-0.36□□□□□ -2.47
snR47snR47 YDR061WQ12298 539 aa-0.36□□□□□ -2.47
snR47snR47 COX4P04037 155 aa-0.37□□□□□ -2.47
snR47snR47 RPL8AP17076 256 aaKnown RBP-0.37□□□□□ -2.47
snR47snR47 CBF5P33322 483 aaKnown RBP RIP-Chip data-0.37□□□□□ -2.47not detected
snR47snR47 TGL1P34163 548 aa-0.37□□□□□ -2.47
snR47snR47 ESL2P36168 1195 aa-0.37□□□□□ -2.47
snR47snR47 MIG3P39943 394 aa-0.37□□□□□ -2.47
snR47snR47 GPP2P40106 250 aaKnown RBP-0.37□□□□□ -2.47
snR47snR47 SEC9P40357 651 aa-0.37□□□□□ -2.47
snR47snR47 IMA5P40884 581 aa-0.37□□□□□ -2.47
snR47snR47 ELP2P42935 788 aa-0.37□□□□□ -2.47
snR47snR47 YFL012WP43580 148 aa-0.37□□□□□ -2.47
snR47snR47 STR3P53101 465 aaKnown RBP-0.37□□□□□ -2.47
snR47snR47 CWC25P53854 179 aaKnown RBP-0.37□□□□□ -2.47
snR47snR47 TAF7Q05021 590 aa-0.37□□□□□ -2.47
snR47snR47 APL4Q12028 832 aa-0.37□□□□□ -2.47
snR47snR47 VPS54Q12071 889 aa-0.37□□□□□ -2.47
snR47snR47 SWT1Q12104 458 aa-0.37□□□□□ -2.47
snR47snR47 LSP1Q12230 341 aaKnown RBP-0.37□□□□□ -2.47
snR47snR47 PET122P10355 254 aa-0.38□□□□□ -2.47
snR47snR47 MKK1P32490 508 aa-0.38□□□□□ -2.47
snR47snR47 REC114P32841 428 aa-0.38□□□□□ -2.47
snR47snR47 ANS1P38832 159 aa-0.38□□□□□ -2.47
snR47snR47 ALD5P40047 520 aaKnown RBP-0.38□□□□□ -2.47
snR47snR47 SCS2P40075 244 aaKnown RBP-0.38□□□□□ -2.47
snR47snR47 STB1P42845 420 aa-0.38□□□□□ -2.47
snR47snR47 AVT4P50944 713 aa-0.38□□□□□ -2.47
snR47snR47 SNU71P53207 620 aaKnown RBP-0.38□□□□□ -2.47
snR47snR47 PCP1P53259 346 aa-0.38□□□□□ -2.47
snR47snR47 SMM1P53720 384 aaKnown RBP-0.38□□□□□ -2.47
snR47snR47 TPS1Q00764 495 aaKnown RBP-0.38□□□□□ -2.47
snR47snR47 EXO70P19658 623 aa-0.39□□□□□ -2.47
snR47snR47 LCB1P25045 558 aaKnown RBP-0.39□□□□□ -2.47
snR47snR47 SPS22P25380 463 aa-0.39□□□□□ -2.47
snR47snR47 TFC3P34111 1160 aa-0.39□□□□□ -2.47
snR47snR47 YKL050CP35736 922 aa-0.39□□□□□ -2.47
snR47snR47 PFF1P38244 976 aa-0.39□□□□□ -2.47
snR47snR47 GPP1P41277 250 aaKnown RBP-0.39□□□□□ -2.47
snR47snR47 NCA3P46955 337 aa-0.39□□□□□ -2.47
snR47snR47 YPS5P53057 165 aa-0.39□□□□□ -2.47
snR47snR47 YMR102CQ03177 834 aa-0.39□□□□□ -2.47
snR47snR47 THI73Q07904 523 aa-0.39□□□□□ -2.47
snR47snR47 RPS10AQ08745 105 aaPredicted RBP-0.39□□□□□ -2.47
snR47snR47 NKP1Q12493 238 aa-0.39□□□□□ -2.47
snR47snR47 NUP145P49687 1317 aa-0.39□□□□□ -2.47
snR47snR47 ARG81P05085 880 aa-0.4□□□□□ -2.47
snR47snR47 ADH4P10127 382 aa-0.4□□□□□ -2.47
snR47snR47 PEP5P12868 1029 aa-0.4□□□□□ -2.47
snR47snR47 ZUO1P32527 433 aaKnown RBP-0.4□□□□□ -2.47
snR47snR47 GLC7P32598 312 aaKnown RBP-0.4□□□□□ -2.47
snR47snR47 CAB2P40506 365 aa-0.4□□□□□ -2.47
snR47snR47 DUG1P43616 481 aaKnown RBP-0.4□□□□□ -2.47
snR47snR47 YJR154WP47181 346 aa-0.4□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms