RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeast

Gene CKB2, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKB2	YOR039W	YMR018W	Q04364	514 aa		5.12	□□□□□ -1.59
CKB2	YOR039W	YOR387C	Q08910	206 aa		5.12	□□□□□ -1.59
CKB2	YOR039W	NEW1	Q08972	1196 aa	Known RBP	5.12	□□□□□ -1.59
CKB2	YOR039W	RKI1	Q12189	258 aa		5.12	□□□□□ -1.59
CKB2	YOR039W	BI3	Q9ZZW7	517 aa		5.12	□□□□□ -1.59
CKB2	YOR039W	RAD3	P06839	778 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	ADE3	P07245	946 aa	Known RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	MTF2	P10849	440 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	KAR3	P17119	729 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	DBF4	P32325	704 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	DAL3	P32459	195 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	IME2	P32581	645 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	BLI1	P35727	113 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	MIC60	P36112	540 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	RKM3	P38222	552 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	YHR033W	P38690	423 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	FSH1	P38777	243 aa	Known RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	PMC1	P38929	1173 aa	Predicted RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	TMN3	P40071	706 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	TMA108	P40462	946 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	TAN1	P53072	289 aa	Predicted RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	SPC105	P53148	917 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	TDA7	P53882	636 aa	Predicted RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	APM1	Q00776	475 aa	Predicted RBP	5.11	□□□□□ -1.59
CKB2	YOR039W	SMA1	Q02651	245 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	ATG16	Q03818	150 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	UFO1	Q04511	668 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	NDD1	Q08887	554 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	AIM41	Q12032	185 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	ATG9	Q12142	997 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	SEY1	Q99287	776 aa		5.11	□□□□□ -1.59
CKB2	YOR039W	RPL40A	P0CH08	128 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	RPL40B	P0CH09	128 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	POL30	P15873	258 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	TUP1	P16649	713 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	EST1	P17214	699 aa	Predicted RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	MET16	P18408	261 aa	Predicted RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	DAL81	P21657	970 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	TRX1	P22217	103 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	ROX1	P25042	368 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	HXT4	P32467	576 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	KAP104	P38217	918 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	MUP3	P38734	546 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	ERP2	P39704	215 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	EDC3	P39998	551 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	YER189W	P40104	122 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	AIM23	P47015	356 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	TCB2	P48231	1178 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	SLD3	P53135	668 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	TRM112	P53738	135 aa	Predicted RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	COG6	P53959	839 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	INP2	Q03824	705 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	YDR222W	Q04925	415 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	IVY1	Q04934	453 aa		5.1	□□□□□ -1.59
CKB2	YOR039W	RPN8	Q08723	338 aa	Known RBP	5.1	□□□□□ -1.59
CKB2	YOR039W	PMS1	P14242	873 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	ADY2	P25613	283 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	MTC7	P32633	139 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	TFB1	P32776	642 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	CDS1	P38221	457 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	STL1	P39932	569 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	PMT6	P42934	759 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	IML2	P47031	731 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	SNF12	P53628	566 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	YNL144C	P53907	740 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	VPS9	P54787	451 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	NGL3	Q03210	505 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	ARA2	Q04212	335 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	NGL1	Q08213	363 aa	Known RBP	5.09	□□□□□ -1.59
CKB2	YOR039W	DAS2	Q12084	232 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
CKB2	YOR039W	SFI1	Q12369	946 aa		5.09	□□□□□ -1.59
CKB2	YOR039W	EFG1	Q3E705	233 aa	Known RBP	5.09	□□□□□ -1.59
CKB2	YOR039W	FAB1	P34756	2278 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	COX3	P00420	269 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	SST2	P11972	698 aa	Known RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	SPO12	P17123	173 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	ATP12	P22135	325 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	DHR2	P36009	735 aa	Predicted RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	ELF1	P36053	145 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	SRX1	P36077	127 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	APM3	P38153	483 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	MUM2	P38236	366 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	HIS2	P38635	335 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	MSR1	P38714	643 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	BAT1	P38891	393 aa	Known RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	YMR124W	P39523	943 aa	Known RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	YEL020C	P39994	560 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	YJR120W	P47157	116 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	COQ5	P49017	307 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	MRK1	P50873	501 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	VEL1	P53058	206 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	PRM1	P53835	661 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	YNL040W	P53960	456 aa	Predicted RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	ELP3	Q02908	557 aa	Known RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	NGL2	Q03264	515 aa	Known RBP	5.08	□□□□□ -1.6
CKB2	YOR039W	PEX15	Q08215	383 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	AAD15	Q08361	143 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	GPM3	Q12326	303 aa		5.08	□□□□□ -1.6
CKB2	YOR039W	BEM2	P39960	2167 aa	Known RBP	5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms