RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TRM11	YOL124C	YLR046C	Q12253	270 aa		4.22	□□□□□ -1.73
TRM11	YOL124C	YPR071W	Q12346	211 aa		4.22	□□□□□ -1.73
TRM11	YOL124C	PEX11	Q12462	236 aa		4.22	□□□□□ -1.73
TRM11	YOL124C	MPD2	Q99316	277 aa		4.22	□□□□□ -1.73
TRM11	YOL124C	YPR117W	Q06116	2489 aa		4.22	□□□□□ -1.73
TRM11	YOL124C	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.73
TRM11	YOL124C	DAL81	P21657	970 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	MSH2	P25847	964 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	PPZ1	P26570	692 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	NDI1	P32340	513 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	RIM1	P32445	135 aa	Known RBP	4.21	□□□□□ -1.73
TRM11	YOL124C	AEP1	P32493	518 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YKL097C	P34245	136 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	PEX5	P35056	612 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	OAF3	P36023	863 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	ETR1	P38071	380 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	REV7	P38927	245 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	MNN1	P39106	762 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	SEO1	P39709	593 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	CHS6	P40955	746 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YJL107C	P42947	387 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YFL012W	P43580	148 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	RMD8	P43620	662 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	ATG36	P46983	293 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	AIM23	P47015	356 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	AMA1	P50082	593 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	ZIP2	P53061	704 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	NUP100	Q02629	959 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YHM2	Q04013	314 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	NHX1	Q04121	633 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	CDC123	Q05791	360 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	SFH1	Q06168	426 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	MRH1	Q12117	320 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM11	YOL124C	RMD5	Q12508	421 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YLR149C	Q99296	730 aa		4.21	□□□□□ -1.73
TRM11	YOL124C	YMR084W	A2P2R3	262 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	SCH9	P11792	824 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TRM11	YOL124C	ARF2	P19146	181 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	ATP12	P22135	325 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	AMD2	P22580	549 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	NPP1	P25353	742 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	SGF29	P25554	259 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	YCL068C	P25593	260 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	STE13	P33894	931 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	OCA5	P38738	679 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	UBP7	P40453	1071 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	SDP1	P40479	209 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	SEC28	P40509	296 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	TRF5	P48561	642 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	PYK2	P52489	506 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	NUP84	P52891	726 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	VEL1	P53058	206 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	COG1	P53079	417 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	AIM14	P53109	570 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	ERP6	P53198	216 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	PEX8	P53248	589 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	BUD32	P53323	261 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	RCF2	P53721	224 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	NOP15	P53927	220 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	TFB2	Q02939	513 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	FAR8	Q05040	523 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	NSE1	Q07913	336 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	PER33	Q12144	273 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	RUD3	Q12234	484 aa	Known RBP	4.21	□□□□□ -1.74
TRM11	YOL124C	NCA2	Q12374	616 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	SWM1	Q12379	170 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	YOR338W	Q99326	363 aa		4.21	□□□□□ -1.74
TRM11	YOL124C	RPS14A	P06367	137 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	SSC1	P0CS90	654 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	SST2	P11972	698 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
TRM11	YOL124C	SRV2	P17555	526 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	MNE1	P24720	663 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	YSP3	P25036	478 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	PUP3	P25451	205 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	GDA1	P32621	518 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	IMP3	P32899	183 aa	Predicted RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	MRP21	P38175	177 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	YBR032W	P38223	100 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	YSW1	P38280	609 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	YBP1	P38315	674 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	YHR020W	P38708	688 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	YHI9	P38765	294 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	RPS14B	P39516	138 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	SSP120	P39931	234 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	RSP5	P39940	809 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	SAP1	P39955	897 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	OSW5	P40219	148 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	RAD26	P40352	1085 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	SET2	P46995	733 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	LIA1	P47120	325 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	TIM13	P53299	105 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	TDA7	P53882	636 aa	Predicted RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	IMP4	P53941	290 aa	Known RBP	4.2	□□□□□ -1.74
TRM11	YOL124C	EFM6	P53970	246 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	DOS2	P54858	310 aa		4.2	□□□□□ -1.74
TRM11	YOL124C	SPP2	Q02521	185 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms