RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C HEL2Q05580 639 aaKnown RBP3.84□□□□□ -1.79
CIT1YNR001C HCR1Q05775 265 aaKnown RBP3.84□□□□□ -1.79
CIT1YNR001C MRD1Q06106 887 aaKnown RBP3.84□□□□□ -1.79
CIT1YNR001C SWA2Q06677 668 aa3.84□□□□□ -1.79
CIT1YNR001C VPS54Q12071 889 aa3.84□□□□□ -1.79
CIT1YNR001C RTC5Q12108 567 aaKnown RBP3.84□□□□□ -1.79
CIT1YNR001C HRP1Q99383 534 aaKnown RBP3.84□□□□□ -1.79
CIT1YNR001C YLR278CQ05854 1341 aa3.83□□□□□ -1.8
CIT1YNR001C JIP3O13555 125 aa3.83□□□□□ -1.8
CIT1YNR001C YMR085WP0CF18 432 aa3.83□□□□□ -1.8
CIT1YNR001C LRE1P25579 583 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C FEN2P25621 512 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C NIP1P32497 812 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C HEL1P36113 551 aa3.83□□□□□ -1.8
CIT1YNR001C MUP3P38734 546 aa3.83□□□□□ -1.8
CIT1YNR001C YHL017WP38745 532 aa3.83□□□□□ -1.8
CIT1YNR001C CCT4P39078 528 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C YJL206CP39529 758 aa3.83□□□□□ -1.8
CIT1YNR001C GET2P40056 285 aa3.83□□□□□ -1.8
CIT1YNR001C OSW5P40219 148 aa3.83□□□□□ -1.8
CIT1YNR001C SNM1P40993 198 aa3.83□□□□□ -1.8
CIT1YNR001C HXT14P42833 540 aa3.83□□□□□ -1.8
CIT1YNR001C PET130P47065 347 aa3.83□□□□□ -1.8
CIT1YNR001C NPA3P47122 385 aa3.83□□□□□ -1.8
CIT1YNR001C STR3P53101 465 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C SNF12P53628 566 aa3.83□□□□□ -1.8
CIT1YNR001C RSM28Q03430 361 aa3.83□□□□□ -1.8
CIT1YNR001C ARX1Q03862 593 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C MGR3Q04472 501 aa3.83□□□□□ -1.8
CIT1YNR001C DON1Q05610 365 aa3.83□□□□□ -1.8
CIT1YNR001C MMR1Q06324 491 aa3.83□□□□□ -1.8
CIT1YNR001C ARR3Q06598 404 aa3.83□□□□□ -1.8
CIT1YNR001C FMP40Q08968 688 aaPredicted RBP3.83□□□□□ -1.8
CIT1YNR001C HER1Q12276 1246 aa3.83□□□□□ -1.8
CIT1YNR001C YDR061WQ12298 539 aa3.83□□□□□ -1.8
CIT1YNR001C SPE4Q12455 300 aa3.83□□□□□ -1.8
CIT1YNR001C DDP1Q99321 188 aaKnown RBP3.83□□□□□ -1.8
CIT1YNR001C PDA1P16387 420 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C OM45P16547 393 aa3.82□□□□□ -1.8
CIT1YNR001C SRV2P17555 526 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C MRPS28P21771 286 aa3.82□□□□□ -1.8
CIT1YNR001C APN1P22936 367 aa3.82□□□□□ -1.8
CIT1YNR001C YCR061WP25639 631 aa3.82□□□□□ -1.8
CIT1YNR001C RAD5P32849 1169 aaPredicted RBP3.82□□□□□ -1.8
CIT1YNR001C OLA1P38219 394 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C MED8P38304 223 aa3.82□□□□□ -1.8
CIT1YNR001C VPS45P38932 577 aa3.82□□□□□ -1.8
CIT1YNR001C SAP1P39955 897 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C SGN1P40561 250 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CIT1YNR001C IRC8P47046 822 aa3.82□□□□□ -1.8
CIT1YNR001C APT1P49435 187 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C YGL036WP53185 909 aaPredicted RBP3.82□□□□□ -1.8
CIT1YNR001C MTL1P53214 551 aa3.82□□□□□ -1.8
CIT1YNR001C YGR054WP53235 642 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C RRP46P53256 223 aaPredicted RBP3.82□□□□□ -1.8
CIT1YNR001C YNR068CP53754 272 aa3.82□□□□□ -1.8
CIT1YNR001C DLT1Q04216 342 aa3.82□□□□□ -1.8
CIT1YNR001C SML1Q04964 104 aa3.82□□□□□ -1.8
CIT1YNR001C TSR1Q07381 788 aaKnown RBP3.82□□□□□ -1.8
CIT1YNR001C TLG2Q08144 397 aa3.82□□□□□ -1.8
CIT1YNR001C SUT2Q12286 268 aa3.82□□□□□ -1.8
CIT1YNR001C PSY3Q12318 242 aa3.82□□□□□ -1.8
CIT1YNR001C CDC8P00572 216 aa3.81□□□□□ -1.8
CIT1YNR001C MET3P08536 511 aa3.81□□□□□ -1.8
CIT1YNR001C RPL1AP0CX43 217 aaKnown RBP3.81□□□□□ -1.8
CIT1YNR001C RPL1BP0CX44 217 aaKnown RBP3.81□□□□□ -1.8
CIT1YNR001C SRB4P32569 687 aa3.81□□□□□ -1.8
CIT1YNR001C SIP1P32578 815 aa3.81□□□□□ -1.8
CIT1YNR001C BCS1P32839 456 aa3.81□□□□□ -1.8
CIT1YNR001C YHR131CP38835 850 aa3.81□□□□□ -1.8
CIT1YNR001C NUP60P39705 539 aa3.81□□□□□ -1.8
CIT1YNR001C BUR6P40096 142 aa3.81□□□□□ -1.8
CIT1YNR001C ALG5P40350 334 aa3.81□□□□□ -1.8
CIT1YNR001C SEC24P40482 926 aaKnown RBP3.81□□□□□ -1.8
CIT1YNR001C SDS3P40505 327 aa3.81□□□□□ -1.8
CIT1YNR001C CTK2P46962 323 aa3.81□□□□□ -1.8
CIT1YNR001C UBX6P47049 396 aa3.81□□□□□ -1.8
CIT1YNR001C EAF6P47128 113 aa3.81□□□□□ -1.8
CIT1YNR001C BPL1P48445 690 aaPredicted RBP3.81□□□□□ -1.8
CIT1YNR001C SHE10P53075 577 aa3.81□□□□□ -1.8
CIT1YNR001C ALF1P53904 254 aa3.81□□□□□ -1.8
CIT1YNR001C BOP3P53958 396 aa3.81□□□□□ -1.8
CIT1YNR001C PPM1Q04081 328 aa3.81□□□□□ -1.8
CIT1YNR001C RAD33Q04231 177 aa3.81□□□□□ -1.8
CIT1YNR001C RRP36Q12481 300 aaPredicted RBP3.81□□□□□ -1.8
CIT1YNR001C YER175W-AQ8TGU4 54 aa3.81□□□□□ -1.8
CIT1YNR001C AUS1Q08409 1394 aa3.81□□□□□ -1.8
CIT1YNR001C CDC37P06101 506 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C TPK2P06245 380 aa3.8□□□□□ -1.8
CIT1YNR001C CAF20P12962 161 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C HOM2P13663 365 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C RPO26P20435 155 aa3.8□□□□□ -1.8
CIT1YNR001C MVD1P32377 396 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C PDB1P32473 366 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C TCD2P36101 447 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C TEL1P38110 2787 aa3.8□□□□□ -1.8
CIT1YNR001C NTC20P38302 140 aaPredicted RBP3.8□□□□□ -1.8
CIT1YNR001C RRT2P38332 387 aa3.8□□□□□ -1.8
CIT1YNR001C TIF5P38431 405 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C OSH3P38713 996 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms