RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SYN8P31377 255 aa8.49□□□□□ -1.05
RPD3YNL330C PEP7P32609 515 aa8.49□□□□□ -1.05
RPD3YNL330C ATO2P32907 282 aa8.49□□□□□ -1.05
RPD3YNL330C PCF11P39081 626 aaPredicted RBP8.49□□□□□ -1.05
RPD3YNL330C TY4A-JP47023 414 aa8.49□□□□□ -1.05
RPD3YNL330C GTO1P48239 356 aa8.49□□□□□ -1.05
RPD3YNL330C PRP24P49960 444 aaKnown RBP8.49□□□□□ -1.05
RPD3YNL330C TRM112P53738 135 aaPredicted RBP8.49□□□□□ -1.05
RPD3YNL330C SWP1Q02795 286 aa8.49□□□□□ -1.05
RPD3YNL330C PIR3Q03180 325 aa8.49□□□□□ -1.05
RPD3YNL330C GCN5Q03330 439 aa8.49□□□□□ -1.05
RPD3YNL330C GPI11Q06636 219 aa8.49□□□□□ -1.05
RPD3YNL330C VAM6Q07468 1049 aa8.49□□□□□ -1.05
RPD3YNL330C RPN8Q08723 338 aaKnown RBP8.49□□□□□ -1.05
RPD3YNL330C HRK1Q08732 759 aaKnown RBP8.49□□□□□ -1.05
RPD3YNL330C YLL054CQ12244 843 aa8.49□□□□□ -1.05
RPD3YNL330C BRR1Q99177 341 aaPredicted RBP8.49□□□□□ -1.05
RPD3YNL330C YLR149CQ99296 730 aa8.49□□□□□ -1.05
RPD3YNL330C TPK3P05986 398 aa8.48□□□□□ -1.05
RPD3YNL330C ATP1P07251 545 aaKnown RBP8.48□□□□□ -1.05
RPD3YNL330C GUK1P15454 187 aaKnown RBP8.48□□□□□ -1.05
RPD3YNL330C MIH1P23748 554 aa8.48□□□□□ -1.05
RPD3YNL330C UBC8P28263 218 aa8.48□□□□□ -1.05
RPD3YNL330C YKL100CP34248 587 aa8.48□□□□□ -1.05
RPD3YNL330C LDB7P38210 180 aa8.48□□□□□ -1.05
RPD3YNL330C SIF2P38262 535 aa8.48□□□□□ -1.05
RPD3YNL330C DHH1P39517 506 aaKnown RBP8.48□□□□□ -1.05
RPD3YNL330C PSF2P40359 213 aa8.48□□□□□ -1.05
RPD3YNL330C AYR1P40471 297 aa8.48□□□□□ -1.05
RPD3YNL330C GCD10P41814 478 aa8.48□□□□□ -1.05
RPD3YNL330C SWP82P43554 623 aa8.48□□□□□ -1.05
RPD3YNL330C YNR063WP53749 607 aa8.48□□□□□ -1.05
RPD3YNL330C RSN1Q03516 953 aa8.48□□□□□ -1.05
RPD3YNL330C EFR3Q03653 782 aaKnown RBP8.48□□□□□ -1.05
RPD3YNL330C ECM11Q04110 302 aa8.48□□□□□ -1.05
RPD3YNL330C YMR111CQ04461 462 aaPredicted RBP8.48□□□□□ -1.05
RPD3YNL330C YDR124WQ04608 324 aa8.48□□□□□ -1.05
RPD3YNL330C MCP2Q06567 569 aa8.48□□□□□ -1.05
RPD3YNL330C REH1Q06709 432 aa8.48□□□□□ -1.05
RPD3YNL330C JLP1Q12358 412 aa8.48□□□□□ -1.05
RPD3YNL330C HXK2P04807 486 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C GPH1P06738 902 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C RPS4AP0CX35 261 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C RPS4BP0CX36 261 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C MET22P32179 357 aa8.47□□□□□ -1.05
RPD3YNL330C NUF2P33895 451 aa8.47□□□□□ -1.05
RPD3YNL330C MAE1P36013 669 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C STB6P36085 766 aa8.47□□□□□ -1.05
RPD3YNL330C APM3P38153 483 aa8.47□□□□□ -1.05
RPD3YNL330C PEX18P38855 283 aa8.47□□□□□ -1.05
RPD3YNL330C SWD1P39706 426 aa8.47□□□□□ -1.05
RPD3YNL330C AFG3P39925 761 aa8.47□□□□□ -1.05
RPD3YNL330C RGI1P40043 161 aaPredicted RBP8.47□□□□□ -1.05
RPD3YNL330C MEP1P40260 492 aa8.47□□□□□ -1.05
RPD3YNL330C YGL176CP46945 554 aa8.47□□□□□ -1.05
RPD3YNL330C ESF2P53743 316 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C SPR6Q01684 191 aa8.47□□□□□ -1.05
RPD3YNL330C YMR099CQ03161 297 aaKnown RBP8.47□□□□□ -1.05
RPD3YNL330C KRE28Q04431 385 aa8.47□□□□□ -1.05
RPD3YNL330C YML083CQ04526 418 aa8.47□□□□□ -1.05
RPD3YNL330C MAM3Q12296 706 aa8.47□□□□□ -1.05
RPD3YNL330C MED11Q99278 115 aa8.47□□□□□ -1.05
RPD3YNL330C RAD7P06779 565 aa8.46□□□□□ -1.06
RPD3YNL330C SPT3P06844 337 aa8.46□□□□□ -1.06
RPD3YNL330C HEM1P09950 548 aaPredicted RBP8.46□□□□□ -1.06
RPD3YNL330C SCH9P11792 824 aaKnown RBP8.46□□□□□ -1.06
RPD3YNL330C MRP13P12686 339 aa8.46□□□□□ -1.06
RPD3YNL330C OCA4P25366 362 aa8.46□□□□□ -1.06
RPD3YNL330C ITR2P30606 609 aa8.46□□□□□ -1.06
RPD3YNL330C PRP21P32524 280 aaPredicted RBP8.46□□□□□ -1.06
RPD3YNL330C CDC5P32562 705 aa8.46□□□□□ -1.06
RPD3YNL330C SCD5P34758 872 aa8.46□□□□□ -1.06
RPD3YNL330C YKR051WP36142 418 aa8.46□□□□□ -1.06
RPD3YNL330C POL12P38121 705 aaPredicted RBP8.46□□□□□ -1.06
RPD3YNL330C SLX1P38324 304 aa8.46□□□□□ -1.06
RPD3YNL330C EGD2P38879 174 aaKnown RBP8.46□□□□□ -1.06
RPD3YNL330C SIT1P39980 628 aa8.46□□□□□ -1.06
RPD3YNL330C UFE1P41834 346 aa8.46□□□□□ -1.06
RPD3YNL330C SPO74P45819 413 aa8.46□□□□□ -1.06
RPD3YNL330C GUS1P46655 708 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
RPD3YNL330C YGR035CP53222 116 aa8.46□□□□□ -1.06
RPD3YNL330C ARE2P53629 642 aaKnown RBP8.46□□□□□ -1.06
RPD3YNL330C YNL018CP53976 612 aa8.46□□□□□ -1.06
RPD3YNL330C TLG1Q03322 224 aa8.46□□□□□ -1.06
RPD3YNL330C YDR132CQ03900 495 aa8.46□□□□□ -1.06
RPD3YNL330C YHC1Q05900 231 aaKnown RBP8.46□□□□□ -1.06
RPD3YNL330C RPN6Q12377 434 aa8.46□□□□□ -1.06
RPD3YNL330C TIF6Q12522 245 aaKnown RBP8.46□□□□□ -1.06
RPD3YNL330C YKL018C-AQ3E7A7 99 aa8.46□□□□□ -1.06
RPD3YNL330C MHF2Q3E829 80 aa8.46□□□□□ -1.06
RPD3YNL330C ARG81P05085 880 aa8.45□□□□□ -1.06
RPD3YNL330C UBA1P22515 1024 aaKnown RBP8.45□□□□□ -1.06
RPD3YNL330C RBK1P25332 333 aa8.45□□□□□ -1.06
RPD3YNL330C COQ8P27697 501 aa8.45□□□□□ -1.06
RPD3YNL330C ARP2P32381 391 aaKnown RBP8.45□□□□□ -1.06
RPD3YNL330C DOM34P33309 386 aa8.45□□□□□ -1.06
RPD3YNL330C MRPL40P36534 297 aa8.45□□□□□ -1.06
RPD3YNL330C YPK3P38070 525 aa8.45□□□□□ -1.06
RPD3YNL330C KTR4P38131 464 aa8.45□□□□□ -1.06
RPD3YNL330C GND1P38720 489 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms