RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W IAH1P41734 238 aa3.37□□□□□ -1.87
SEC4YFL005W PET130P47065 347 aa3.37□□□□□ -1.87
SEC4YFL005W PKP2P53170 491 aa3.37□□□□□ -1.87
SEC4YFL005W TWF1P53250 332 aa3.37□□□□□ -1.87
SEC4YFL005W EKI1Q03764 534 aa3.37□□□□□ -1.87
SEC4YFL005W YDR239CQ03780 787 aa3.37□□□□□ -1.87
SEC4YFL005W GEP3Q08622 556 aa3.37□□□□□ -1.87
SEC4YFL005W RIM20Q12033 661 aa3.37□□□□□ -1.87
SEC4YFL005W SFI1Q12369 946 aa3.37□□□□□ -1.87
SEC4YFL005W SEC39Q12745 709 aa3.37□□□□□ -1.87
SEC4YFL005W RPL42AP0CX27 106 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W RPL42BP0CX28 106 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W SUI2P20459 304 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W GID7P25569 745 aa3.36□□□□□ -1.87
SEC4YFL005W ERG3P32353 365 aa3.36□□□□□ -1.87
SEC4YFL005W PDR3P33200 976 aa3.36□□□□□ -1.87
SEC4YFL005W MPE1P35728 441 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W CMC1P36064 111 aa3.36□□□□□ -1.87
SEC4YFL005W MUM2P38236 366 aa3.36□□□□□ -1.87
SEC4YFL005W LAG1P38703 411 aa3.36□□□□□ -1.87
SEC4YFL005W GND1P38720 489 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W YGR126WP53274 230 aa3.36□□□□□ -1.87
SEC4YFL005W SCW4P53334 386 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W ESBP6P53918 673 aa3.36□□□□□ -1.87
SEC4YFL005W TOF2Q02208 771 aa3.36□□□□□ -1.87
SEC4YFL005W NUP100Q02629 959 aa3.36□□□□□ -1.87
SEC4YFL005W YMR160WQ03823 816 aa3.36□□□□□ -1.87
SEC4YFL005W MRD1Q06106 887 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W ATG29Q12092 213 aa3.36□□□□□ -1.87
SEC4YFL005W PGA3Q12746 312 aaKnown RBP3.36□□□□□ -1.87
SEC4YFL005W FUR1P18562 216 aaKnown RBP3.35□□□□□ -1.87
SEC4YFL005W GPI10P30777 616 aa3.35□□□□□ -1.87
SEC4YFL005W YME1P32795 747 aa3.35□□□□□ -1.87
SEC4YFL005W YKL023WP36103 277 aaKnown RBP3.35□□□□□ -1.87
SEC4YFL005W SMF1P38925 575 aa3.35□□□□□ -1.87
SEC4YFL005W RTS2P40962 232 aa3.35□□□□□ -1.87
SEC4YFL005W VTC2P43585 828 aa3.35□□□□□ -1.87
SEC4YFL005W ALK1P43633 760 aaKnown RBP3.35□□□□□ -1.87
SEC4YFL005W SNG1P46950 547 aa3.35□□□□□ -1.87
SEC4YFL005W SMM1P53720 384 aaKnown RBP3.35□□□□□ -1.87
SEC4YFL005W DUG3P53871 357 aa3.35□□□□□ -1.87
SEC4YFL005W YPL068CQ02749 293 aa3.35□□□□□ -1.87
SEC4YFL005W SSK1Q07084 712 aa3.35□□□□□ -1.87
SEC4YFL005W RRG1Q12167 365 aaPredicted RBP3.35□□□□□ -1.87
SEC4YFL005W NCE102Q12207 173 aaRIP-Chip data3.35□□□□□ -1.87not detected
SEC4YFL005W RTN2Q12443 393 aa3.35□□□□□ -1.87
SEC4YFL005W YFL068WP0CX99 160 aa3.34□□□□□ -1.87
SEC4YFL005W YLL066W-AP0CY00 160 aa3.34□□□□□ -1.87
SEC4YFL005W YLL067W-AP0CY01 160 aa3.34□□□□□ -1.87
SEC4YFL005W PEP5P12868 1029 aa3.34□□□□□ -1.87
SEC4YFL005W ELO2P25358 347 aa3.34□□□□□ -1.87
SEC4YFL005W PAP1P29468 568 aaKnown RBP3.34□□□□□ -1.87
SEC4YFL005W NFU1P32860 256 aa3.34□□□□□ -1.87
SEC4YFL005W SEC66P33754 206 aa3.34□□□□□ -1.87
SEC4YFL005W PMT1P33775 817 aa3.34□□□□□ -1.87
SEC4YFL005W SHP1P34223 423 aa3.34□□□□□ -1.87
SEC4YFL005W YHR210CP38893 341 aa3.34□□□□□ -1.87
SEC4YFL005W YIL152WP40455 235 aa3.34□□□□□ -1.87
SEC4YFL005W YVH1Q02256 364 aaKnown RBP3.34□□□□□ -1.87
SEC4YFL005W SHR3Q02774 210 aa3.34□□□□□ -1.87
SEC4YFL005W YMR254CQ04838 102 aa3.34□□□□□ -1.87
SEC4YFL005W RSF1Q05043 376 aa3.34□□□□□ -1.87
SEC4YFL005W RQC1Q05468 723 aaKnown RBP3.34□□□□□ -1.87
SEC4YFL005W COQ9Q05779 260 aa3.34□□□□□ -1.87
SEC4YFL005W YDL057WQ07379 328 aa3.34□□□□□ -1.87
SEC4YFL005W MLH2Q07980 695 aa3.34□□□□□ -1.87
SEC4YFL005W ARP6Q12509 438 aa3.34□□□□□ -1.87
SEC4YFL005W PEP4P07267 405 aaKnown RBP3.33□□□□□ -1.88
SEC4YFL005W PMS1P14242 873 aa3.33□□□□□ -1.88
SEC4YFL005W PRP2P20095 876 aaPredicted RBP3.33□□□□□ -1.88
SEC4YFL005W MCM4P30665 933 aaKnown RBP3.33□□□□□ -1.88
SEC4YFL005W ATO2P32907 282 aa3.33□□□□□ -1.88
SEC4YFL005W PHD1P36093 366 aa3.33□□□□□ -1.88
SEC4YFL005W BYE1P36106 594 aa3.33□□□□□ -1.88
SEC4YFL005W ERG7P38604 731 aa3.33□□□□□ -1.88
SEC4YFL005W OTU2P38747 307 aaKnown RBP3.33□□□□□ -1.88
SEC4YFL005W HXT14P42833 540 aa3.33□□□□□ -1.88
SEC4YFL005W BET4Q00618 327 aa3.33□□□□□ -1.88
SEC4YFL005W DSE3Q08729 430 aa3.33□□□□□ -1.88
SEC4YFL005W YOR365CQ08844 703 aa3.33□□□□□ -1.88
SEC4YFL005W YDL007C-AQ2V2Q0 85 aa3.33□□□□□ -1.88
SEC4YFL005W RPL31BP0C2H9 113 aaKnown RBP3.32□□□□□ -1.88
SEC4YFL005W MGR1P25573 417 aa3.32□□□□□ -1.88
SEC4YFL005W SPC34P36131 295 aa3.32□□□□□ -1.88
SEC4YFL005W LSM5P40089 93 aaKnown RBP3.32□□□□□ -1.88
SEC4YFL005W FET5P43561 622 aa3.32□□□□□ -1.88
SEC4YFL005W AIM22P47051 409 aa3.32□□□□□ -1.88
SEC4YFL005W ALT2P52892 507 aa3.32□□□□□ -1.88
SEC4YFL005W CAF130P53280 1122 aaPredicted RBP3.32□□□□□ -1.88
SEC4YFL005W RHO4Q00246 291 aa3.32□□□□□ -1.88
SEC4YFL005W YPL014WQ02606 381 aa3.32□□□□□ -1.88
SEC4YFL005W YMR155WQ03795 547 aa3.32□□□□□ -1.88
SEC4YFL005W PDS5Q04264 1277 aa3.32□□□□□ -1.88
SEC4YFL005W YLR281CQ05863 155 aa3.32□□□□□ -1.88
SEC4YFL005W SNA4Q07549 140 aa3.32□□□□□ -1.88
SEC4YFL005W THP1Q08231 455 aa3.32□□□□□ -1.88
SEC4YFL005W BRR1Q99177 341 aaPredicted RBP3.32□□□□□ -1.88
SEC4YFL005W CLB3P24870 427 aa3.31□□□□□ -1.88
SEC4YFL005W RPS2P25443 254 aaKnown RBP3.31□□□□□ -1.88
SEC4YFL005W MIC60P36112 540 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms