RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C MET28P40573 187 aa1.34□□□□□ -2.19
SWI4YER111C IRC24P40580 263 aa1.34□□□□□ -2.19
SWI4YER111C SMC3P47037 1230 aa1.34□□□□□ -2.19
SWI4YER111C YGL138CP53122 345 aa1.34□□□□□ -2.19
SWI4YER111C VPS73P53142 486 aaKnown RBP1.34□□□□□ -2.19
SWI4YER111C YGR250CP53316 781 aaKnown RBP1.34□□□□□ -2.19
SWI4YER111C NRD1P53617 575 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
SWI4YER111C INA17Q02888 182 aa1.34□□□□□ -2.19
SWI4YER111C TMN2Q04562 672 aa1.34□□□□□ -2.19
SWI4YER111C GPM3Q12326 303 aa1.34□□□□□ -2.19
SWI4YER111C ARG81P05085 880 aa1.34□□□□□ -2.2
SWI4YER111C MDH1P17505 334 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
SWI4YER111C SRP54P20424 541 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C RPB8P20436 146 aa1.34□□□□□ -2.2
SWI4YER111C TKL1P23254 680 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C GAC1P28006 793 aa1.34□□□□□ -2.2
SWI4YER111C TUL1P36096 758 aa1.34□□□□□ -2.2
SWI4YER111C POP2P39008 433 aa1.34□□□□□ -2.2
SWI4YER111C EXO1P39875 702 aa1.34□□□□□ -2.2
SWI4YER111C EFM4P40516 257 aa1.34□□□□□ -2.2
SWI4YER111C PKP1P40530 394 aa1.34□□□□□ -2.2
SWI4YER111C EFM6P53970 246 aa1.34□□□□□ -2.2
SWI4YER111C PEX25Q02969 394 aa1.34□□□□□ -2.2
SWI4YER111C MRD1Q06106 887 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C YLR456WQ06199 204 aa1.34□□□□□ -2.2
SWI4YER111C RDR1Q08904 546 aa1.34□□□□□ -2.2
SWI4YER111C PUS9Q12069 462 aa1.34□□□□□ -2.2
SWI4YER111C NFI1Q12216 726 aa1.34□□□□□ -2.2
SWI4YER111C PDE2P06776 526 aa1.34□□□□□ -2.2
SWI4YER111C MGM1P32266 881 aa1.34□□□□□ -2.2
SWI4YER111C AFG1P32317 509 aa1.34□□□□□ -2.2
SWI4YER111C NTC20P38302 140 aaPredicted RBP1.34□□□□□ -2.2
SWI4YER111C FTH1P38310 465 aa1.34□□□□□ -2.2
SWI4YER111C YHR054CP38780 354 aa1.34□□□□□ -2.2
SWI4YER111C CCT6P39079 546 aa1.34□□□□□ -2.2
SWI4YER111C CIN4P39110 191 aa1.34□□□□□ -2.2
SWI4YER111C SEC28P40509 296 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C DLD2P46681 530 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C ORC5P50874 479 aa1.34□□□□□ -2.2
SWI4YER111C HOS2P53096 452 aaPredicted RBP1.34□□□□□ -2.2
SWI4YER111C YGR111WP53265 400 aa1.34□□□□□ -2.2
SWI4YER111C YGR126WP53274 230 aa1.34□□□□□ -2.2
SWI4YER111C JJJ1P53863 590 aa1.34□□□□□ -2.2
SWI4YER111C BOP3P53958 396 aa1.34□□□□□ -2.2
SWI4YER111C SNU56Q03782 492 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C YDR131CQ03899 556 aa1.34□□□□□ -2.2
SWI4YER111C RPC11Q04307 110 aaPredicted RBP1.34□□□□□ -2.2
SWI4YER111C ORM2Q06144 216 aa1.34□□□□□ -2.2
SWI4YER111C TPO3Q06451 622 aa1.34□□□□□ -2.2
SWI4YER111C YOL159CQ08300 171 aa1.34□□□□□ -2.2
SWI4YER111C DCI1Q08558 271 aa1.34□□□□□ -2.2
SWI4YER111C FRE6Q12473 712 aa1.34□□□□□ -2.2
SWI4YER111C PGA3Q12746 312 aaKnown RBP1.34□□□□□ -2.2
SWI4YER111C Q0010Q9ZZX9 128 aa1.34□□□□□ -2.2
SWI4YER111C RPN13O13563 156 aa1.33□□□□□ -2.2
SWI4YER111C PMA2P19657 947 aa1.33□□□□□ -2.2
SWI4YER111C TRX1P22217 103 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C URE2P23202 354 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C YBL055CP34220 418 aaPredicted RBP1.33□□□□□ -2.2
SWI4YER111C SCO2P38072 301 aa1.33□□□□□ -2.2
SWI4YER111C IMD2P38697 523 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C UIP3P39547 235 aa1.33□□□□□ -2.2
SWI4YER111C TAX4P47030 604 aa1.33□□□□□ -2.2
SWI4YER111C IMD3P50095 523 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C ERG26P53199 349 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C HEL2Q05580 639 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C YLR345WQ06137 509 aa1.33□□□□□ -2.2
SWI4YER111C VTA1Q06263 330 aa1.33□□□□□ -2.2
SWI4YER111C TAF3Q12297 353 aa1.33□□□□□ -2.2
SWI4YER111C SEC39Q12745 709 aa1.33□□□□□ -2.2
SWI4YER111C MYO4P32492 1471 aa1.33□□□□□ -2.2
SWI4YER111C CYB2P00175 591 aa1.33□□□□□ -2.2
SWI4YER111C HSP82P02829 709 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C CHO1P08456 276 aa1.33□□□□□ -2.2
SWI4YER111C RPL31BP0C2H9 113 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C SUI2P20459 304 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C NUP1P20676 1076 aa1.33□□□□□ -2.2
SWI4YER111C YJU2P28320 278 aaPredicted RBP1.33□□□□□ -2.2
SWI4YER111C MRE11P32829 692 aa1.33□□□□□ -2.2
SWI4YER111C OAR1P35731 278 aa1.33□□□□□ -2.2
SWI4YER111C MOH1P38191 138 aa1.33□□□□□ -2.2
SWI4YER111C RKM3P38222 552 aa1.33□□□□□ -2.2
SWI4YER111C YEL020CP39994 560 aa1.33□□□□□ -2.2
SWI4YER111C YIL166CP40445 542 aa1.33□□□□□ -2.2
SWI4YER111C POP1P41812 875 aa1.33□□□□□ -2.2
SWI4YER111C YGR149WP48236 432 aa1.33□□□□□ -2.2
SWI4YER111C SMM1P53720 384 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C ATP23P53722 227 aa1.33□□□□□ -2.2
SWI4YER111C YNL234WP53857 426 aa1.33□□□□□ -2.2
SWI4YER111C SEC5P89102 971 aa1.33□□□□□ -2.2
SWI4YER111C ARX1Q03862 593 aaKnown RBP1.33□□□□□ -2.2
SWI4YER111C ECM22Q05958 814 aaPredicted RBP1.33□□□□□ -2.2
SWI4YER111C RAD34Q06665 692 aa1.33□□□□□ -2.2
SWI4YER111C IRC3Q06683 689 aa1.33□□□□□ -2.2
SWI4YER111C MCH4Q08268 501 aa1.33□□□□□ -2.2
SWI4YER111C SMF3Q12078 473 aaPredicted RBP1.33□□□□□ -2.2
SWI4YER111C PNS1Q12412 539 aa1.33□□□□□ -2.2
SWI4YER111C SNF3P10870 884 aa1.32□□□□□ -2.2
SWI4YER111C PCT1P13259 424 aa1.32□□□□□ -2.2
SWI4YER111C RRP7P25368 297 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms