RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C CDC42P19073 191 aa1.3□□□□□ -2.2
SEC3YER008C YSP3P25036 478 aa1.3□□□□□ -2.2
SEC3YER008C RAD51P25454 400 aa1.3□□□□□ -2.2
SEC3YER008C HXT3P32466 567 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C MRPL7P36519 292 aa1.3□□□□□ -2.2
SEC3YER008C FAD1P38913 306 aa1.3□□□□□ -2.2
SEC3YER008C SDS3P40505 327 aa1.3□□□□□ -2.2
SEC3YER008C SWP82P43554 623 aa1.3□□□□□ -2.2
SEC3YER008C TAX4P47030 604 aa1.3□□□□□ -2.2
SEC3YER008C CUE3P53137 624 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C VPS73P53142 486 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C USA1Q03714 838 aa1.3□□□□□ -2.2
SEC3YER008C YDR239CQ03780 787 aa1.3□□□□□ -2.2
SEC3YER008C ULA1Q12059 462 aa1.3□□□□□ -2.2
SEC3YER008C COX1P00401 534 aa1.3□□□□□ -2.2
SEC3YER008C STE3P06783 470 aa1.3□□□□□ -2.2
SEC3YER008C PRB1P09232 635 aa1.3□□□□□ -2.2
SEC3YER008C PDE1P22434 369 aa1.3□□□□□ -2.2
SEC3YER008C ELO2P25358 347 aa1.3□□□□□ -2.2
SEC3YER008C CWH43P25618 953 aa1.3□□□□□ -2.2
SEC3YER008C YCR051WP25631 222 aa1.3□□□□□ -2.2
SEC3YER008C SYN8P31377 255 aa1.3□□□□□ -2.2
SEC3YER008C MSS1P32559 526 aaPredicted RBP1.3□□□□□ -2.2
SEC3YER008C VPS17P32913 551 aa1.3□□□□□ -2.2
SEC3YER008C YHR054CP38780 354 aa1.3□□□□□ -2.2
SEC3YER008C LAS21P40367 830 aa1.3□□□□□ -2.2
SEC3YER008C IST3P40565 148 aaPredicted RBP1.3□□□□□ -2.2
SEC3YER008C IME4P41833 600 aa1.3□□□□□ -2.2
SEC3YER008C YGL185CP53100 379 aa1.3□□□□□ -2.2
SEC3YER008C YGR079WP53249 370 aa1.3□□□□□ -2.2
SEC3YER008C JJJ1P53863 590 aa1.3□□□□□ -2.2
SEC3YER008C TOF2Q02208 771 aa1.3□□□□□ -2.2
SEC3YER008C YVH1Q02256 364 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C YMR111CQ04461 462 aaPredicted RBP1.3□□□□□ -2.2
SEC3YER008C COQ9Q05779 260 aa1.3□□□□□ -2.2
SEC3YER008C MCP2Q06567 569 aa1.3□□□□□ -2.2
SEC3YER008C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
SEC3YER008C NMD4Q12129 218 aa1.3□□□□□ -2.2
SEC3YER008C MRPL23Q12487 163 aaPredicted RBP1.3□□□□□ -2.2
SEC3YER008C AI5_ALPHAQ9ZZX1 630 aa1.3□□□□□ -2.2
SEC3YER008C IKI3Q06706 1349 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C YML003WP0CF16 290 aa1.29□□□□□ -2.2
SEC3YER008C WHI2P12611 486 aa1.29□□□□□ -2.2
SEC3YER008C RNR3P21672 869 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C CDC15P27636 974 aa1.29□□□□□ -2.2
SEC3YER008C CRM1P30822 1084 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C RPC34P32910 317 aa1.29□□□□□ -2.2
SEC3YER008C SEF1P34228 1148 aa1.29□□□□□ -2.2
SEC3YER008C LHS1P36016 881 aa1.29□□□□□ -2.2
SEC3YER008C CTK2P46962 323 aa1.29□□□□□ -2.2
SEC3YER008C PET130P47065 347 aa1.29□□□□□ -2.2
SEC3YER008C ALT2P52892 507 aa1.29□□□□□ -2.2
SEC3YER008C YIP5P53108 310 aa1.29□□□□□ -2.2
SEC3YER008C SNF12P53628 566 aa1.29□□□□□ -2.2
SEC3YER008C CPR8P53728 308 aa1.29□□□□□ -2.2
SEC3YER008C CSL4P53859 292 aaPredicted RBP1.29□□□□□ -2.2
SEC3YER008C DBP9Q06218 594 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C ARV1Q06541 321 aa1.29□□□□□ -2.2
SEC3YER008C ARR3Q06598 404 aa1.29□□□□□ -2.2
SEC3YER008C YPR172WQ06608 200 aa1.29□□□□□ -2.2
SEC3YER008C DIB1Q06819 143 aaPredicted RBP1.29□□□□□ -2.2
SEC3YER008C RTC1Q08281 1341 aa1.29□□□□□ -2.2
SEC3YER008C RPL1AP0CX43 217 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C RPL1BP0CX44 217 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C REC107P21651 314 aa1.29□□□□□ -2.2
SEC3YER008C YIM1P28625 365 aa1.29□□□□□ -2.2
SEC3YER008C NIP1P32497 812 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C SAC6P32599 642 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C NPL6P32832 435 aa1.29□□□□□ -2.2
SEC3YER008C RPF2P36160 344 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C FSH1P38777 243 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C SLZ1P40167 298 aa1.29□□□□□ -2.2
SEC3YER008C OPT1P40897 799 aa1.29□□□□□ -2.2
SEC3YER008C YFR020WP43600 232 aa1.29□□□□□ -2.2
SEC3YER008C SHE4P51534 789 aa1.29□□□□□ -2.2
SEC3YER008C YGL242CP53066 181 aa1.29□□□□□ -2.2
SEC3YER008C YNL234WP53857 426 aa1.29□□□□□ -2.2
SEC3YER008C OCA2P53949 197 aa1.29□□□□□ -2.2
SEC3YER008C SMX3P54999 86 aaPredicted RBP1.29□□□□□ -2.2
SEC3YER008C MUB1Q03162 620 aa1.29□□□□□ -2.2
SEC3YER008C PFA5Q03289 374 aa1.29□□□□□ -2.2
SEC3YER008C RNH1Q04740 348 aa1.29□□□□□ -2.2
SEC3YER008C NOP6Q07623 225 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C IZH3Q07959 543 aa1.29□□□□□ -2.2
SEC3YER008C VPS54Q12071 889 aa1.29□□□□□ -2.2
SEC3YER008C MDH1P17505 334 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SEC3YER008C SUI2P20459 304 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C AMD2P22580 549 aa1.29□□□□□ -2.2
SEC3YER008C TCD2P36101 447 aaKnown RBP1.29□□□□□ -2.2
SEC3YER008C RIX1P38883 763 aaPredicted RBP1.29□□□□□ -2.2
SEC3YER008C BUR6P40096 142 aa1.29□□□□□ -2.2
SEC3YER008C YIR016WP40572 265 aa1.29□□□□□ -2.2
SEC3YER008C IRC8P47046 822 aa1.29□□□□□ -2.2
SEC3YER008C YGR266WP53326 701 aa1.29□□□□□ -2.2
SEC3YER008C RAD33Q04231 177 aa1.29□□□□□ -2.2
SEC3YER008C VPS38Q05919 439 aa1.29□□□□□ -2.2
SEC3YER008C NUS1Q12063 375 aa1.29□□□□□ -2.2
SEC3YER008C Q0010Q9ZZX9 128 aa1.29□□□□□ -2.2
SEC3YER008C UNG1P12887 359 aa1.28□□□□□ -2.2
SEC3YER008C SRV2P17555 526 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms