RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	PUT2	P07275	575 aa		3.56	□□□□□ -1.84
PMI40	YER003C	GPA1	P08539	472 aa		3.56	□□□□□ -1.84
PMI40	YER003C	TUB1	P09733	447 aa	Known RBP	3.56	□□□□□ -1.84
PMI40	YER003C	PRP2	P20095	876 aa	Predicted RBP	3.56	□□□□□ -1.84
PMI40	YER003C	ELO2	P25358	347 aa		3.56	□□□□□ -1.84
PMI40	YER003C	RRP7	P25368	297 aa	Predicted RBP	3.56	□□□□□ -1.84
PMI40	YER003C	GAC1	P28006	793 aa		3.56	□□□□□ -1.84
PMI40	YER003C	MGM1	P32266	881 aa		3.56	□□□□□ -1.84
PMI40	YER003C	DPH2	P32461	534 aa		3.56	□□□□□ -1.84
PMI40	YER003C	MTR2	P34232	184 aa	Known RBP	3.56	□□□□□ -1.84
PMI40	YER003C	TUL1	P36096	758 aa		3.56	□□□□□ -1.84
PMI40	YER003C	PXL1	P36166	706 aa		3.56	□□□□□ -1.84
PMI40	YER003C	PIM1	P36775	1133 aa		3.56	□□□□□ -1.84
PMI40	YER003C	ANS1	P38832	159 aa		3.56	□□□□□ -1.84
PMI40	YER003C	LYS20	P48570	428 aa	Known RBP	3.56	□□□□□ -1.84
PMI40	YER003C	ATP22	P50273	684 aa	Predicted RBP	3.56	□□□□□ -1.84
PMI40	YER003C	EAF7	P53911	425 aa	Known RBP	3.56	□□□□□ -1.84
PMI40	YER003C	COQ9	Q05779	260 aa		3.56	□□□□□ -1.84
PMI40	YER003C	ECM30	Q06673	1274 aa		3.56	□□□□□ -1.84
PMI40	YER003C	IRC3	Q06683	689 aa		3.56	□□□□□ -1.84
PMI40	YER003C	RPS10A	Q08745	105 aa	Predicted RBP	3.56	□□□□□ -1.84
PMI40	YER003C	SPE3	Q12074	293 aa	Known RBP	3.56	□□□□□ -1.84
PMI40	YER003C	GPM3	Q12326	303 aa		3.56	□□□□□ -1.84
PMI40	YER003C	YER145C-A	A0A023PYF4	145 aa		3.55	□□□□□ -1.84
PMI40	YER003C	ARP1	P38696	384 aa		3.55	□□□□□ -1.84
PMI40	YER003C	ALK1	P43633	760 aa	Known RBP	3.55	□□□□□ -1.84
PMI40	YER003C	RPS10B	P46784	105 aa	Known RBP	3.55	□□□□□ -1.84
PMI40	YER003C	NET1	P47035	1189 aa		3.55	□□□□□ -1.84
PMI40	YER003C	URB2	P47108	1174 aa		3.55	□□□□□ -1.84
PMI40	YER003C	FMS1	P50264	508 aa		3.55	□□□□□ -1.84
PMI40	YER003C	YGR111W	P53265	400 aa		3.55	□□□□□ -1.84
PMI40	YER003C	CAF130	P53280	1122 aa	Predicted RBP	3.55	□□□□□ -1.84
PMI40	YER003C	YTP1	P53584	459 aa		3.55	□□□□□ -1.84
PMI40	YER003C	ASI1	P54074	624 aa		3.55	□□□□□ -1.84
PMI40	YER003C	RSM23	Q01163	450 aa		3.55	□□□□□ -1.84
PMI40	YER003C	MEH1	Q02205	184 aa		3.55	□□□□□ -1.84
PMI40	YER003C	SNU56	Q03782	492 aa	Known RBP	3.55	□□□□□ -1.84
PMI40	YER003C	SWF1	Q04629	336 aa		3.55	□□□□□ -1.84
PMI40	YER003C	RRP45	Q05636	305 aa	Known RBP	3.55	□□□□□ -1.84
PMI40	YER003C	ADE13	Q05911	482 aa	Known RBP	3.55	□□□□□ -1.84
PMI40	YER003C	ATG26	Q06321	1198 aa		3.55	□□□□□ -1.84
PMI40	YER003C	FRE3	Q08905	711 aa		3.55	□□□□□ -1.84
PMI40	YER003C	PGC1	Q08959	321 aa		3.55	□□□□□ -1.84
PMI40	YER003C	SKS1	Q12505	502 aa		3.55	□□□□□ -1.84
PMI40	YER003C	CTF3	Q12748	733 aa		3.55	□□□□□ -1.84
PMI40	YER003C	CBP1	P07252	654 aa		3.54	□□□□□ -1.84
PMI40	YER003C	SPS4	P09937	338 aa		3.54	□□□□□ -1.84
PMI40	YER003C	SUI2	P20459	304 aa	Known RBP	3.54	□□□□□ -1.84
PMI40	YER003C	PPH22	P23595	377 aa		3.54	□□□□□ -1.84
PMI40	YER003C	RAD14	P28519	371 aa		3.54	□□□□□ -1.84
PMI40	YER003C	RPN2	P32565	945 aa	Known RBP	3.54	□□□□□ -1.84
PMI40	YER003C	LTV1	P34078	463 aa		3.54	□□□□□ -1.84
PMI40	YER003C	NTC20	P38302	140 aa	Predicted RBP	3.54	□□□□□ -1.84
PMI40	YER003C	RRT2	P38332	387 aa		3.54	□□□□□ -1.84
PMI40	YER003C	UBA4	P38820	440 aa		3.54	□□□□□ -1.84
PMI40	YER003C	RIX1	P38883	763 aa	Predicted RBP	3.54	□□□□□ -1.84
PMI40	YER003C	ATG27	P46989	271 aa		3.54	□□□□□ -1.84
PMI40	YER003C	COS5	P47187	383 aa		3.54	□□□□□ -1.84
PMI40	YER003C	UBP8	P50102	471 aa		3.54	□□□□□ -1.84
PMI40	YER003C	PYK2	P52489	506 aa	Known RBP	3.54	□□□□□ -1.84
PMI40	YER003C	YGL138C	P53122	345 aa		3.54	□□□□□ -1.84
PMI40	YER003C	CUL3	P53202	744 aa		3.54	□□□□□ -1.84
PMI40	YER003C	YGR126W	P53274	230 aa		3.54	□□□□□ -1.84
PMI40	YER003C	BTN2	P53286	410 aa		3.54	□□□□□ -1.84
PMI40	YER003C	YNL144C	P53907	740 aa		3.54	□□□□□ -1.84
PMI40	YER003C	SKO1	Q02100	647 aa		3.54	□□□□□ -1.84
PMI40	YER003C	FMP30	Q02883	468 aa		3.54	□□□□□ -1.84
PMI40	YER003C	HOT1	Q03213	719 aa		3.54	□□□□□ -1.84
PMI40	YER003C	YMR160W	Q03823	816 aa		3.54	□□□□□ -1.84
PMI40	YER003C	YDR286C	Q05530	114 aa		3.54	□□□□□ -1.84
PMI40	YER003C	COS7	Q07788	383 aa		3.54	□□□□□ -1.84
PMI40	YER003C	SMF3	Q12078	473 aa	Predicted RBP	3.54	□□□□□ -1.84
PMI40	YER003C	NCE102	Q12207	173 aa	RIP-Chip data	3.54	□□□□□ -1.84	not detected
PMI40	YER003C	YLR111W	Q12528	110 aa		3.54	□□□□□ -1.84
PMI40	YER003C	PEP4	P07267	405 aa	Known RBP	3.53	□□□□□ -1.84
PMI40	YER003C	NUP1	P20676	1076 aa		3.53	□□□□□ -1.84
PMI40	YER003C	SPB1	P25582	841 aa	Predicted RBP	3.53	□□□□□ -1.84
PMI40	YER003C	SHP1	P34223	423 aa		3.53	□□□□□ -1.84
PMI40	YER003C	SWH1	P35845	1188 aa		3.53	□□□□□ -1.84
PMI40	YER003C	SLM4	P38247	162 aa		3.53	□□□□□ -1.84
PMI40	YER003C	VPS41	P38959	992 aa		3.53	□□□□□ -1.84
PMI40	YER003C	ULP2	P40537	1034 aa	Predicted RBP	3.53	□□□□□ -1.84
PMI40	YER003C	IRC7	P43623	340 aa		3.53	□□□□□ -1.84
PMI40	YER003C	AIM22	P47051	409 aa		3.53	□□□□□ -1.84
PMI40	YER003C	BPL1	P48445	690 aa	Predicted RBP	3.53	□□□□□ -1.84
PMI40	YER003C	RPT4	P53549	437 aa	Known RBP	3.53	□□□□□ -1.84
PMI40	YER003C	SLG1	P54867	378 aa		3.53	□□□□□ -1.84
PMI40	YER003C	TPO3	Q06451	622 aa		3.53	□□□□□ -1.84
PMI40	YER003C	RPN5	Q12250	445 aa	Known RBP	3.53	□□□□□ -1.84
PMI40	YER003C	BRR1	Q99177	341 aa	Predicted RBP	3.53	□□□□□ -1.84
PMI40	YER003C	BNR1	P40450	1375 aa		3.52	□□□□□ -1.85
PMI40	YER003C	HIP1	P06775	603 aa		3.52	□□□□□ -1.85
PMI40	YER003C	RHO2	P06781	192 aa		3.52	□□□□□ -1.85
PMI40	YER003C	CUE2	P36075	443 aa	Known RBP	3.52	□□□□□ -1.85
PMI40	YER003C	HOT13	P36078	116 aa		3.52	□□□□□ -1.85
PMI40	YER003C	HEL1	P36113	551 aa		3.52	□□□□□ -1.85
PMI40	YER003C	THI2	P38141	450 aa		3.52	□□□□□ -1.85
PMI40	YER003C	YHR054C	P38780	354 aa		3.52	□□□□□ -1.85
PMI40	YER003C	YHR210C	P38893	341 aa		3.52	□□□□□ -1.85
PMI40	YER003C	MBB1	P39534	108 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms