RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	SEC66	P33754	206 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	TCD2	P36101	447 aa	Known RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	PIH1	P38768	344 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	LIN1	P38852	340 aa	Predicted RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	LNP1	P38878	278 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	YJL206C	P39529	758 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	FTR1	P40088	404 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	YNL195C	P40168	261 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	INA22	P40576	216 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	VMA13	P41807	478 aa	Known RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	SMC3	P47037	1230 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	IRC8	P47046	822 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	TRF5	P48561	642 aa	Known RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	RPT4	P53549	437 aa	Known RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	SKO1	Q02100	647 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	FIN1	Q03898	291 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	SEG1	Q04279	960 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	CSI1	Q04368	295 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	ARG7	Q04728	441 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	ASM4	Q05166	528 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	YLR297W	Q05899	129 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	YLR455W	Q06188	304 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	IRC13	Q08630	104 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	FRE3	Q08905	711 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	TY3A-G	Q12173	290 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	MED4	Q12343	284 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	TY3A-I	Q99219	290 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	PET111	P08468	800 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	SPO7	P18410	259 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	URA4	P20051	364 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	VPS33	P20795	691 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	RNR1	P21524	888 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	LRE1	P25579	583 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	BUD14	P27637	709 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	FAA1	P30624	700 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	PDB1	P32473	366 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	SSE2	P32590	693 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	PEX2	P32800	271 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SPR28	YDR218C	WBP1	P33767	430 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	PXL1	P36166	706 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	PIM1	P36775	1133 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	ATP3	P38077	311 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	PFF1	P38244	976 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	PCL5	P38794	229 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	YNG2	P38806	282 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	BZZ1	P38822	633 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	CRG1	P38892	291 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
SPR28	YDR218C	CCT6	P39079	546 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	YJL193W	P39542	402 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	ECM1	P39715	212 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	SEC24	P40482	926 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	ELP2	P42935	788 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	YJL132W	P47014	750 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	YHC3	P47040	408 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	RAD17	P48581	401 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	HOP2	P53187	214 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	COP1	P53622	1201 aa	Known RBP	4.6	□□□□□ -1.67
SPR28	YDR218C	VPS20	Q04272	221 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	CRF1	Q04930	467 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	HOF1	Q05080	669 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	ECM3	Q99252	613 aa		4.6	□□□□□ -1.67
SPR28	YDR218C	MF(ALPHA)1	P01149	165 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	CDC37	P06101	506 aa	Known RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	ILV5	P06168	395 aa	Known RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	CBP1	P07252	654 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	UNG1	P12887	359 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	TUP1	P16649	713 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	PDE1	P22434	369 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	UBA1	P22515	1024 aa	Known RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	VPS34	P22543	875 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	PET18	P25362	215 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	SPS22	P25380	463 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	URK1	P27515	501 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	HXT3	P32466	567 aa	Known RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	DSS4	P32601	143 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	RML2	P32611	393 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	YME1	P32795	747 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	TUL1	P36096	758 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	MMS4	P38257	691 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	PEX32	P38292	413 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	EHT1	P38295	451 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	SLX1	P38324	304 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	YDL183C	P48569	320 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	IMD4	P50094	524 aa	Known RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	FMS1	P50264	508 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	YGL036W	P53185	909 aa	Predicted RBP	4.59	□□□□□ -1.67
SPR28	YDR218C	INA17	Q02888	182 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	SNZ1	Q03148	297 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	YMR130W	Q04223	302 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	GSH2	Q08220	491 aa		4.59	□□□□□ -1.67
SPR28	YDR218C	YLR415C	O13578	112 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	ILV2	P07342	687 aa	Known RBP	4.58	□□□□□ -1.68
SPR28	YDR218C	GPA1	P08539	472 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	ADH7	P25377	361 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	MEI5	P32489	222 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	THI2	P38141	450 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	SIC1	P38634	284 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	COS12	P53053	380 aa		4.58	□□□□□ -1.68
SPR28	YDR218C	EFM5	P53200	248 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms