RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	BSP1	Q06604	576 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	SWA2	Q06677	668 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	LEA1	Q08963	238 aa	Predicted RBP	3.45	□□□□□ -1.86
CMD1	YBR109C	LYS21	Q12122	440 aa	Known RBP	3.45	□□□□□ -1.86
CMD1	YBR109C	NBP2	Q12163	236 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	SMC6	Q12749	1114 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	YOR111W	Q99210	232 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	YOR019W	Q99248	730 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	TUS1	Q06412	1307 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	SRP54	P20424	541 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	SAN1	P22470	610 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	PTC6	P25646	442 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	CDC60	P26637	1090 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	HXT1	P32465	570 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	SWI3	P32591	825 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	RAD5	P32849	1169 aa	Predicted RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	LOS1	P33418	1100 aa	Predicted RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	NIP100	P33420	868 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	PTK1	P36002	662 aa	Predicted RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	ALY1	P36117	915 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	PXL1	P36166	706 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	FTH1	P38310	465 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	IMD2	P38697	523 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	NOP16	P40007	231 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	TMA108	P40462	946 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	LYS14	P40971	790 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	SWP82	P43554	623 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	ARC1	P46672	376 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	AIP1	P46680	615 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	UPF3	P48412	387 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	IMD3	P50095	523 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	VID30	P53076	958 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	DCP2	P53550	970 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	BSC5	P53755	489 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	JJJ1	P53863	590 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	RPL22B	P56628	122 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	YMR102C	Q03177	834 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	NGL3	Q03210	505 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	GIR2	Q03768	265 aa	Predicted RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	MYO5	Q04439	1219 aa	Known RBP	3.44	□□□□□ -1.86
CMD1	YBR109C	ENT4	Q07872	247 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	TAF10	Q12030	206 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	YLR111W	Q12528	110 aa		3.44	□□□□□ -1.86
CMD1	YBR109C	CET1	O13297	549 aa	Predicted RBP	3.43	□□□□□ -1.86
CMD1	YBR109C	BI2	P03873	423 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	RAD57	P25301	460 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	PSO2	P30620	661 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	YKL023W	P36103	277 aa	Known RBP	3.43	□□□□□ -1.86
CMD1	YBR109C	NTR2	P36118	322 aa	Predicted RBP	3.43	□□□□□ -1.86
CMD1	YBR109C	YSW1	P38280	609 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	APD1	P38281	316 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	SMF1	P38925	575 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	ERV46	P39727	415 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	IME4	P41833	600 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	MIC19	P43594	170 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	YPR003C	P53394	754 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	INN1	P53901	409 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	YNL058C	P53947	316 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	GYL1	Q04322	720 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	SOV1	Q04748	898 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	VIP1	Q06685	1146 aa	Known RBP	3.43	□□□□□ -1.86
CMD1	YBR109C	GPN2	Q08726	347 aa	Predicted RBP	3.43	□□□□□ -1.86
CMD1	YBR109C	DSE3	Q08729	430 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	YOR389W	Q08912	624 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	MED1	Q12321	566 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	SKM1	Q12469	655 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	SEY1	Q99287	776 aa		3.43	□□□□□ -1.86
CMD1	YBR109C	SEM1	O94742	89 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	YMR085W	P0CF18	432 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	CDC24	P11433	854 aa	Predicted RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	HOM2	P13663	365 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	SPO12	P17123	173 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	AAC3	P18238	307 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	VPS1	P21576	704 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	YUR1	P26725	428 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	ZUO1	P32527	433 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	ECM32	P32644	1121 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	YME1	P32795	747 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	BLI1	P35727	113 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	SWH1	P35845	1188 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	LAS1	P36146	502 aa	Predicted RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	JNM1	P36224	373 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	MED8	P38304	223 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	SIP3	P38717	1229 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	VPS45	P38932	577 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	SLZ1	P40167	298 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	SEC24	P40482	926 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	CDC1	P40986	491 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	CIN1	P40987	1014 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	YJR079W	P47126	109 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	AAD10	P47182	288 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	YSA1	Q01976	231 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	MUB1	Q03162	620 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	YMR114C	Q04471	368 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	SMD2	Q06217	110 aa	Known RBP	3.42	□□□□□ -1.86
CMD1	YBR109C	HIF1	Q12373	385 aa		3.42	□□□□□ -1.86
CMD1	YBR109C	ERG11	P10614	530 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	MRPL25	P23369	157 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	KRE2	P27809	442 aa		3.41	□□□□□ -1.86
CMD1	YBR109C	GCG1	P32656	232 aa	Known RBP	3.41	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms