RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 YPR078CQ06813 372 aa2.57□□□□□ -2
snR43snR43 RXT3Q07458 294 aa2.57□□□□□ -2
snR43snR43 CWC2Q12046 339 aaPredicted RBP2.57□□□□□ -2
snR43snR43 MSL5Q12186 476 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
snR43snR43 HSP42Q12329 375 aa2.57□□□□□ -2
snR43snR43 OCA6Q12454 224 aa2.57□□□□□ -2
snR43snR43 IZH4Q99393 312 aa2.57□□□□□ -2
snR43snR43 CDC37P06101 506 aaKnown RBP2.56□□□□□ -2
snR43snR43 GFA1P14742 717 aaKnown RBP2.56□□□□□ -2
snR43snR43 KAR3P17119 729 aa2.56□□□□□ -2
snR43snR43 CLC1P17891 233 aa2.56□□□□□ -2
snR43snR43 TRX1P22217 103 aaKnown RBP2.56□□□□□ -2
snR43snR43 RFA1P22336 621 aaKnown RBP2.56□□□□□ -2
snR43snR43 YSR3P23501 404 aa2.56□□□□□ -2
snR43snR43 YCR006CP25350 157 aa2.56□□□□□ -2
snR43snR43 RFA2P26754 273 aaKnown RBP2.56□□□□□ -2
snR43snR43 GSY2P27472 705 aa2.56□□□□□ -2
snR43snR43 NTH1P32356 751 aa2.56□□□□□ -2
snR43snR43 SPC110P32380 944 aa2.56□□□□□ -2
snR43snR43 CDC13P32797 924 aaKnown RBP2.56□□□□□ -2
snR43snR43 NIP100P33420 868 aa2.56□□□□□ -2
snR43snR43 YET1P35723 206 aa2.56□□□□□ -2
snR43snR43 PHO11P35842 467 aa2.56□□□□□ -2
snR43snR43 PHO12P38693 467 aa2.56□□□□□ -2
snR43snR43 MIP6P38760 659 aaKnown RBP2.56□□□□□ -2
snR43snR43 AIM18P38884 321 aa2.56□□□□□ -2
snR43snR43 SMF1P38925 575 aa2.56□□□□□ -2
snR43snR43 STN1P38960 494 aa2.56□□□□□ -2
snR43snR43 PLB1P39105 664 aa2.56□□□□□ -2
snR43snR43 SIT1P39980 628 aa2.56□□□□□ -2
snR43snR43 TMN3P40071 706 aa2.56□□□□□ -2
snR43snR43 FAU1P40099 211 aa2.56□□□□□ -2
snR43snR43 ELO3P40319 345 aa2.56□□□□□ -2
snR43snR43 SSU1P41930 458 aa2.56□□□□□ -2
snR43snR43 YFR018CP43599 363 aa2.56□□□□□ -2
snR43snR43 RRT5P43607 289 aa2.56□□□□□ -2
snR43snR43 RAI1P53063 387 aaKnown RBP2.56□□□□□ -2
snR43snR43 TAD1P53065 400 aa2.56□□□□□ -2
snR43snR43 COG1P53079 417 aa2.56□□□□□ -2
snR43snR43 YGR111WP53265 400 aa2.56□□□□□ -2
snR43snR43 YNL247WP53852 767 aaKnown RBP2.56□□□□□ -2
snR43snR43 YNL040WP53960 456 aaPredicted RBP2.56□□□□□ -2
snR43snR43 VPS9P54787 451 aa2.56□□□□□ -2
snR43snR43 RHO3Q00245 231 aaKnown RBP2.56□□□□□ -2
snR43snR43 BET4Q00618 327 aa2.56□□□□□ -2
snR43snR43 INA17Q02888 182 aa2.56□□□□□ -2
snR43snR43 TRS23Q03784 219 aa2.56□□□□□ -2
snR43snR43 LRS4Q04087 347 aaKnown RBP2.56□□□□□ -2
snR43snR43 ETT1Q08421 412 aaKnown RBP2.56□□□□□ -2
snR43snR43 PGC1Q08959 321 aa2.56□□□□□ -2
snR43snR43 ENV7Q12003 364 aa2.56□□□□□ -2
snR43snR43 TRM8Q12009 286 aa2.56□□□□□ -2
snR43snR43 GLE1Q12315 538 aa2.56□□□□□ -2
snR43snR43 YDR262WQ12331 272 aa2.56□□□□□ -2
snR43snR43 AI5_ALPHAQ9ZZX1 630 aa2.56□□□□□ -2
snR43snR43 COX5AP00424 153 aa2.55□□□□□ -2
snR43snR43 SOD2P00447 233 aa2.55□□□□□ -2
snR43snR43 RED1P14291 827 aa2.55□□□□□ -2
snR43snR43 APA1P16550 321 aaKnown RBP2.55□□□□□ -2
snR43snR43 PRP6P19735 899 aaPredicted RBP2.55□□□□□ -2
snR43snR43 EPT1P22140 391 aa2.55□□□□□ -2
snR43snR43 YCR015CP25616 317 aa2.55□□□□□ -2
snR43snR43 CDC20P26309 610 aa2.55□□□□□ -2
snR43snR43 MVD1P32377 396 aaKnown RBP2.55□□□□□ -2
snR43snR43 AEP1P32493 518 aa2.55□□□□□ -2
snR43snR43 SPS19P32573 292 aaKnown RBP2.55□□□□□ -2
snR43snR43 PPG1P32838 368 aa2.55□□□□□ -2
snR43snR43 SEF1P34228 1148 aa2.55□□□□□ -2
snR43snR43 MPE1P35728 441 aaKnown RBP2.55□□□□□ -2
snR43snR43 GMH1P36125 273 aa2.55□□□□□ -2
snR43snR43 ARA1P38115 344 aa2.55□□□□□ -2
snR43snR43 BIT2P38346 545 aa2.55□□□□□ -2
snR43snR43 CYC2P38909 366 aa2.55□□□□□ -2
snR43snR43 ATM1P40416 690 aa2.55□□□□□ -2
snR43snR43 PMT3P47190 753 aa2.55□□□□□ -2
snR43snR43 TRF5P48561 642 aaKnown RBP2.55□□□□□ -2
snR43snR43 RFX1P48743 811 aa2.55□□□□□ -2
snR43snR43 HSV2P50079 448 aaPredicted RBP2.55□□□□□ -2
snR43snR43 RIM8P53179 542 aa2.55□□□□□ -2
snR43snR43 GND2P53319 492 aa2.55□□□□□ -2
snR43snR43 VAC7P53950 1165 aa2.55□□□□□ -2
snR43snR43 ARP4P80428 489 aa2.55□□□□□ -2
snR43snR43 ENT5Q03769 411 aaKnown RBP2.55□□□□□ -2
snR43snR43 VMS1Q04311 632 aaKnown RBP2.55□□□□□ -2
snR43snR43 UFO1Q04511 668 aa2.55□□□□□ -2
snR43snR43 RRN11Q04712 507 aa2.55□□□□□ -2
snR43snR43 CIA1Q05583 330 aa2.55□□□□□ -2
snR43snR43 YLR030WQ07967 263 aa2.55□□□□□ -2
snR43snR43 YPL272CQ08984 517 aa2.55□□□□□ -2
snR43snR43 SMF3Q12078 473 aaPredicted RBP2.55□□□□□ -2
snR43snR43 TMS1Q12116 473 aa2.55□□□□□ -2
snR43snR43 EFG1Q3E705 233 aaKnown RBP2.55□□□□□ -2
snR43snR43 AIM44Q99299 758 aa2.55□□□□□ -2
snR43snR43 MDM35O60200 86 aa2.54□□□□□ -2
snR43snR43 ACO1P19414 778 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
snR43snR43 SEC62P21825 274 aa2.54□□□□□ -2
snR43snR43 MEF1P25039 761 aa2.54□□□□□ -2
snR43snR43 RBK1P25332 333 aa2.54□□□□□ -2
snR43snR43 SIN4P32259 974 aa2.54□□□□□ -2
snR43snR43 THI4P32318 326 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms