RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	SDH1	Q00711	640 aa		4.45	□□□□□ -1.7
GDE1	YPL110C	SNX41	Q04053	625 aa		4.45	□□□□□ -1.7
GDE1	YPL110C	YMR027W	Q04371	470 aa		4.45	□□□□□ -1.7
GDE1	YPL110C	RCO1	Q04779	684 aa		4.45	□□□□□ -1.7
GDE1	YPL110C	NBA1	Q08229	501 aa	Known RBP	4.45	□□□□□ -1.7
GDE1	YPL110C	BOS1	P25385	244 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YCR051W	P25631	222 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	PTP2	P29461	750 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	IDS2	P46958	469 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	VOA1	P53262	265 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	SHY1	P53266	389 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	SSU72	P53538	206 aa	Predicted RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	YNL115C	P53925	644 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	EEB1	Q02891	456 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	WAR1	Q03631	944 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	BUD22	Q04347	519 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	HFI1	Q12060	488 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	ARG80	P07249	177 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	PHO13	P19881	312 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	RSA4	P25382	515 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
GDE1	YPL110C	GID7	P25569	745 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	RFT1	P38206	574 aa	Predicted RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	PCA1	P38360	1216 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YAT2	P40017	923 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	UBP6	P43593	499 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	YJR056C	P47115	236 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	ASE1	P50275	885 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YGL204C	P53089	101 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	VHS1	Q03785	461 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	VPS38	Q05919	439 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	THI7	Q05998	598 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	RCL1	Q08096	367 aa	Predicted RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	CIN8	P27895	1000 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	UTP30	P36144	274 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	YBR184W	P38299	523 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	MGS1	P40151	587 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YGR210C	P42942	411 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	CCT8	P47079	568 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	YML6	P51998	286 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	PIB2	P53191	635 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YNR061C	P53747	219 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	RPL6A	Q02326	176 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	ENT5	Q03769	411 aa	Known RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	ARA2	Q04212	335 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	TAF9	Q05027	157 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	RAX1	Q08760	435 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	YOR214C	Q12282	236 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	HSH49	Q99181	213 aa	Predicted RBP	4.44	□□□□□ -1.7
GDE1	YPL110C	MTR10	Q99189	972 aa		4.44	□□□□□ -1.7
GDE1	YPL110C	PRP9	P19736	530 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	CAM1	P29547	415 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	FRD1	P32614	470 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	SEF1	P34228	1148 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	GPB2	P39717	880 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	TPA1	P40032	644 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	DUG1	P43616	481 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	FMP33	P46998	180 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	SWC4	P53201	476 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	TWF1	P53250	332 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	VPS75	P53853	264 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	IRC4	Q03036	179 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	NHX1	Q04121	633 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	RRT8	Q08219	342 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	HRK1	Q08732	759 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	ULA1	Q12059	462 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	DCS2	Q12123	353 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	FMP16	Q12497	93 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	RPP2A	P05319	106 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	MAS1	P10507	462 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	PYC1	P11154	1178 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	FUN26	P31381	517 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	ATP11	P32453	318 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	CDS1	P38221	457 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	YHR045W	P38775	560 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	AIM18	P38884	321 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	INP51	P40559	946 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	SAM37	P50110	327 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	SCY1	P53009	804 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	LSC2	P53312	427 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	PEX13	P80667	386 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	RHO3	Q00245	231 aa	Known RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	CWC27	Q02770	301 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	MRPS17	Q03246	237 aa	Predicted RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	VTA1	Q06263	330 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	LDB17	Q12342	491 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	DBF4	P32325	704 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	HXT1	P32465	570 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	TCA17	P32613	152 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	SUR1	P33300	382 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	SHP1	P34223	423 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	SQT1	P35184	431 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	UBS1	P38290	277 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	KHA1	P40309	873 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	NSA1	P53136	463 aa	Predicted RBP	4.43	□□□□□ -1.7
GDE1	YPL110C	TUB4	P53378	473 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	YTP1	P53584	459 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	CWC24	P53769	259 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	MTQ1	P53944	314 aa		4.43	□□□□□ -1.7
GDE1	YPL110C	FRA1	Q07825	749 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 70 ms