RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	YMR034C	Q05131	434 aa	Predicted RBP	3.2	□□□□□ -1.9
ATG3	YNR007C	YTH1	Q06102	208 aa	Predicted RBP	3.2	□□□□□ -1.9
ATG3	YNR007C	VIP1	Q06685	1146 aa	Known RBP	3.2	□□□□□ -1.9
ATG3	YNR007C	NRT1	Q08485	598 aa		3.2	□□□□□ -1.9
ATG3	YNR007C	AHC1	Q12433	566 aa		3.2	□□□□□ -1.9
ATG3	YNR007C	YBR255C-A	Q3E776	120 aa		3.2	□□□□□ -1.9
ATG3	YNR007C	ADE3	P07245	946 aa	Known RBP	3.19	□□□□□ -1.9
ATG3	YNR007C	POX1	P13711	748 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	KRS1	P15180	591 aa	Known RBP	3.19	□□□□□ -1.9
ATG3	YNR007C	COQ1	P18900	473 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	PDE1	P22434	369 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	MAK31	P23059	88 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	CHS3	P29465	1165 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	RME1	P32338	300 aa	Known RBP	3.19	□□□□□ -1.9
ATG3	YNR007C	GSH1	P32477	678 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	ANP1	P32629	500 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	MYO3	P36006	1272 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	PSY4	P38193	441 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	ARN1	P38731	627 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	MET30	P39014	640 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	SMK1	P41808	388 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	SKP2	P42843	763 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	IML2	P47031	731 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	ESF2	P53743	316 aa	Known RBP	3.19	□□□□□ -1.9
ATG3	YNR007C	YNL144C	P53907	740 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	SUB1	P54000	292 aa	Known RBP	3.19	□□□□□ -1.9
ATG3	YNR007C	SLD5	Q03406	294 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	CSM3	Q04659	317 aa		3.19	□□□□□ -1.9
ATG3	YNR007C	PHO2	P07269	559 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	ILV2	P07342	687 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	PET122	P10355	254 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	UBC1	P21734	215 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	SYN8	P31377	255 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	PRS1	P32895	427 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	TVP38	P36164	337 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	ARB1	P40024	610 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	YIL169C	P40442	995 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	FMS1	P50264	508 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	ARC35	P53731	342 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	MDM1	Q01846	1127 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	YDR341C	Q05506	607 aa	Known RBP	3.18	□□□□□ -1.9
ATG3	YNR007C	NKP2	Q06162	153 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	MMR1	Q06324	491 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	OPY2	Q06810	360 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	SDH5	Q08230	162 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	RIM20	Q12033	661 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	ERP3	Q12403	225 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	CEX1	Q12453	761 aa		3.18	□□□□□ -1.9
ATG3	YNR007C	YFL068W	P0CX99	160 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	YLL066W-A	P0CY00	160 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	YLL067W-A	P0CY01	160 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	SAM1	P10659	382 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	NCP1	P16603	691 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	SAM2	P19358	384 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	SWI4	P25302	1093 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	PTC6	P25646	442 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	PEP3	P27801	918 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	RAD16	P31244	790 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	MSS51	P32335	436 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	SSH4	P32343	579 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	ARP2	P32381	391 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	NUP120	P35729	1037 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	RPF2	P36160	344 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	KTR3	P38130	404 aa	Predicted RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	REG2	P38232	338 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	YBR138C	P38277	524 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	KAP123	P40069	1113 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	UBP7	P40453	1071 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	CTF18	P49956	741 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	ALT2	P52892	507 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	YGL260W	P53056	76 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	ZPR1	P53303	486 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	GTR1	Q00582	310 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	YML131W	Q03102	365 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	MYO5	Q04439	1219 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	GTB1	Q04924	702 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	SCW10	Q04951	389 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	ATG23	Q06671	453 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	CSR1	Q06705	408 aa	Known RBP	3.17	□□□□□ -1.9
ATG3	YNR007C	GSH2	Q08220	491 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	HIF1	Q12373	385 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	TRA1	P38811	3744 aa		3.17	□□□□□ -1.9
ATG3	YNR007C	HIP1	P06775	603 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	IMP2'	P32351	346 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	EXO84	P38261	753 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	UME6	P39001	836 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	BUD16	P39988	312 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	ERR3	P42222	437 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	AZR1	P50080	613 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	BNI5	P53890	448 aa	Known RBP	3.16	□□□□□ -1.9
ATG3	YNR007C	MTG1	Q03151	367 aa	Predicted RBP	3.16	□□□□□ -1.9
ATG3	YNR007C	VAM6	Q07468	1049 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	SMC5	Q08204	1093 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	LEA1	Q08963	238 aa	Predicted RBP	3.16	□□□□□ -1.9
ATG3	YNR007C	SUL2	Q12325	893 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	YDR524C-B	Q3E6R4	66 aa		3.16	□□□□□ -1.9
ATG3	YNR007C	MDN1	Q12019	4910 aa	Known RBP	3.16	□□□□□ -1.9
ATG3	YNR007C	SPO16	P17122	198 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
ATG3	YNR007C	SIP1	P32578	815 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 204.1 ms