RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C MET8P15807 274 aa10.01□□□□□ -0.81
SHB17YKR043C RPB4P20433 221 aaPredicted RBP10.01□□□□□ -0.81
SHB17YKR043C ASK1P35734 292 aa10.01□□□□□ -0.81
SHB17YKR043C PHO89P38361 574 aa10.01□□□□□ -0.81
SHB17YKR043C YNL058CP53947 316 aa10.01□□□□□ -0.81
SHB17YKR043C NHP10Q03435 203 aa10.01□□□□□ -0.81
SHB17YKR043C SFH1Q06168 426 aa10.01□□□□□ -0.81
SHB17YKR043C HSH49Q99181 213 aaPredicted RBP10.01□□□□□ -0.81
SHB17YKR043C COX6P00427 148 aa10□□□□□ -0.81
SHB17YKR043C RNQ1P25367 405 aa10□□□□□ -0.81
SHB17YKR043C SOL2P37262 315 aa10□□□□□ -0.81
SHB17YKR043C ARA1P38115 344 aa10□□□□□ -0.81
SHB17YKR043C SPF1P39986 1215 aaKnown RBP10□□□□□ -0.81
SHB17YKR043C LIA1P47120 325 aaKnown RBP10□□□□□ -0.81
SHB17YKR043C NRM1P53718 249 aa10□□□□□ -0.81
SHB17YKR043C NAM8Q00539 523 aaKnown RBP10□□□□□ -0.81
SHB17YKR043C YMR155WQ03795 547 aa10□□□□□ -0.81
SHB17YKR043C CTK1Q03957 528 aaKnown RBP10□□□□□ -0.81
SHB17YKR043C YLR456WQ06199 204 aa10□□□□□ -0.81
SHB17YKR043C VAM6Q07468 1049 aa10□□□□□ -0.81
SHB17YKR043C MCD1Q12158 566 aa10□□□□□ -0.81
SHB17YKR043C YPL247CQ12523 523 aa10□□□□□ -0.81
SHB17YKR043C YKL068W-AQ3E826 78 aa10□□□□□ -0.81
SHB17YKR043C HRP1Q99383 534 aaKnown RBP10□□□□□ -0.81
SHB17YKR043C MDM35O60200 86 aa9.99□□□□□ -0.81
SHB17YKR043C PRP16P15938 1071 aaPredicted RBP9.99□□□□□ -0.81
SHB17YKR043C CLN2P20438 545 aa9.99□□□□□ -0.81
SHB17YKR043C YCK2P23292 546 aaKnown RBP9.99□□□□□ -0.81
SHB17YKR043C CLB1P24868 471 aa9.99□□□□□ -0.81
SHB17YKR043C CWP1P28319 239 aa9.99□□□□□ -0.81
SHB17YKR043C SPT16P32558 1035 aaKnown RBP9.99□□□□□ -0.81
SHB17YKR043C VRP1P37370 817 aa9.99□□□□□ -0.81
SHB17YKR043C TRM7P38238 310 aaKnown RBP9.99□□□□□ -0.81
SHB17YKR043C YHR127WP38833 243 aaKnown RBP9.99□□□□□ -0.81
SHB17YKR043C STB2P46679 850 aa9.99□□□□□ -0.81
SHB17YKR043C GCV1P48015 400 aa9.99□□□□□ -0.81
SHB17YKR043C MPS2P53159 387 aa9.99□□□□□ -0.81
SHB17YKR043C IST1P53843 298 aaPredicted RBP9.99□□□□□ -0.81
SHB17YKR043C BCH1Q05029 724 aa9.99□□□□□ -0.81
SHB17YKR043C GPR1Q12361 961 aa9.99□□□□□ -0.81
SHB17YKR043C SRV2P17555 526 aaKnown RBP9.98□□□□□ -0.81
SHB17YKR043C KIP2P28743 706 aa9.98□□□□□ -0.81
SHB17YKR043C MGM101P32787 269 aaKnown RBP9.98□□□□□ -0.81
SHB17YKR043C SKT5P34226 696 aa9.98□□□□□ -0.81
SHB17YKR043C NUP120P35729 1037 aa9.98□□□□□ -0.81
SHB17YKR043C DHH1P39517 506 aaKnown RBP9.98□□□□□ -0.81
SHB17YKR043C NPT1P39683 429 aaKnown RBP9.98□□□□□ -0.81
SHB17YKR043C OAF1P39720 1047 aaPredicted RBP9.98□□□□□ -0.81
SHB17YKR043C AXL1P40851 1208 aa9.98□□□□□ -0.81
SHB17YKR043C YFR020WP43600 232 aa9.98□□□□□ -0.81
SHB17YKR043C RCF2P53721 224 aa9.98□□□□□ -0.81
SHB17YKR043C RHO3Q00245 231 aaKnown RBP9.98□□□□□ -0.81
SHB17YKR043C RMI1Q02685 241 aa9.98□□□□□ -0.81
SHB17YKR043C YDR056CQ12025 205 aa9.98□□□□□ -0.81
SHB17YKR043C APC9Q12107 265 aa9.98□□□□□ -0.81
SHB17YKR043C SUL2Q12325 893 aa9.98□□□□□ -0.81
SHB17YKR043C TOR1P35169 2470 aa9.97□□□□□ -0.81
SHB17YKR043C ACC1Q00955 2233 aaKnown RBP9.97□□□□□ -0.81
SHB17YKR043C RSR1P13856 272 aa9.97□□□□□ -0.81
SHB17YKR043C YCR090CP25654 182 aaKnown RBP9.97□□□□□ -0.81
SHB17YKR043C CDC13P32797 924 aaKnown RBP9.97□□□□□ -0.81
SHB17YKR043C YKL100CP34248 587 aa9.97□□□□□ -0.81
SHB17YKR043C NTR2P36118 322 aaPredicted RBP9.97□□□□□ -0.81
SHB17YKR043C RIM2P38127 377 aa9.97□□□□□ -0.81
SHB17YKR043C LIN1P38852 340 aaPredicted RBP9.97□□□□□ -0.81
SHB17YKR043C PFK26P40433 827 aaKnown RBP9.97□□□□□ -0.81
SHB17YKR043C AIF1P52923 378 aa9.97□□□□□ -0.81
SHB17YKR043C PAN2P53010 1115 aaPredicted RBP9.97□□□□□ -0.81
SHB17YKR043C COS12P53053 380 aa9.97□□□□□ -0.81
SHB17YKR043C YGR015CP53208 328 aa9.97□□□□□ -0.81
SHB17YKR043C SHY1P53266 389 aa9.97□□□□□ -0.81
SHB17YKR043C RNT1Q02555 471 aa9.97□□□□□ -0.81
SHB17YKR043C FAR8Q05040 523 aa9.97□□□□□ -0.81
SHB17YKR043C YDR262WQ12331 272 aa9.97□□□□□ -0.81
SHB17YKR043C GAL4P04386 881 aa9.96□□□□□ -0.82
SHB17YKR043C HEM2P05373 342 aa9.96□□□□□ -0.82
SHB17YKR043C ARG1P22768 420 aa9.96□□□□□ -0.82
SHB17YKR043C YCR051WP25631 222 aa9.96□□□□□ -0.82
SHB17YKR043C NRP1P32770 719 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
SHB17YKR043C DOM34P33309 386 aa9.96□□□□□ -0.82
SHB17YKR043C YHR033WP38690 423 aa9.96□□□□□ -0.82
SHB17YKR043C GIC1P38785 314 aa9.96□□□□□ -0.82
SHB17YKR043C LYS1P38998 373 aaRIP-Chip data9.96□□□□□ -0.82 RIP-Chip
SHB17YKR043C LRO1P40345 661 aa9.96□□□□□ -0.82
SHB17YKR043C YRB1P41920 201 aaKnown RBP9.96□□□□□ -0.82
SHB17YKR043C YJR149WP47177 404 aa9.96□□□□□ -0.82
SHB17YKR043C SGF73P53165 657 aa9.96□□□□□ -0.82
SHB17YKR043C ARE2P53629 642 aaKnown RBP9.96□□□□□ -0.82
SHB17YKR043C BNI4P53858 892 aa9.96□□□□□ -0.82
SHB17YKR043C IBD2P53892 351 aa9.96□□□□□ -0.82
SHB17YKR043C STP3Q05937 343 aa9.96□□□□□ -0.82
SHB17YKR043C SEC10Q06245 871 aa9.96□□□□□ -0.82
SHB17YKR043C YOR223WQ12015 292 aa9.96□□□□□ -0.82
SHB17YKR043C RUD3Q12234 484 aaKnown RBP9.96□□□□□ -0.82
SHB17YKR043C NCA2Q12374 616 aa9.96□□□□□ -0.82
SHB17YKR043C POL2P21951 2222 aaKnown RBP9.95□□□□□ -0.82
SHB17YKR043C MCM5P29496 775 aaKnown RBP9.95□□□□□ -0.82
SHB17YKR043C PET309P32522 965 aaPredicted RBP9.95□□□□□ -0.82
SHB17YKR043C LTV1P34078 463 aa9.95□□□□□ -0.82
SHB17YKR043C YBR032WP38223 100 aa9.95□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms