RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C YIR007WP40566 764 aa8.62□□□□□ -1.03
SSL2YIL143C RSM7P47150 247 aa8.62□□□□□ -1.03
SSL2YIL143C PSP1P50896 841 aaKnown RBP8.62□□□□□ -1.03
SSL2YIL143C SIW14P53965 281 aa8.62□□□□□ -1.03
SSL2YIL143C RSC9Q03124 581 aa8.62□□□□□ -1.03
SSL2YIL143C YDR131CQ03899 556 aa8.62□□□□□ -1.03
SSL2YIL143C GPI11Q06636 219 aa8.62□□□□□ -1.03
SSL2YIL143C YLR049CQ12110 428 aa8.62□□□□□ -1.03
SSL2YIL143C MNN1P39106 762 aa8.61□□□□□ -1.03
SSL2YIL143C FPK1P53739 893 aa8.61□□□□□ -1.03
SSL2YIL143C NOP13P53883 403 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
SSL2YIL143C COG5P53951 403 aa8.61□□□□□ -1.03
SSL2YIL143C YNL018CP53976 612 aa8.61□□□□□ -1.03
SSL2YIL143C SPR6Q01684 191 aa8.61□□□□□ -1.03
SSL2YIL143C YPL062WQ02781 134 aa8.61□□□□□ -1.03
SSL2YIL143C RPN9Q04062 393 aaKnown RBP8.61□□□□□ -1.03
SSL2YIL143C RAD33Q04231 177 aa8.61□□□□□ -1.03
SSL2YIL143C SWC7Q06707 132 aa8.61□□□□□ -1.03
SSL2YIL143C WHI5Q12416 295 aa8.61□□□□□ -1.03
SSL2YIL143C PFK27Q12471 397 aaPredicted RBP8.61□□□□□ -1.03
SSL2YIL143C TIM9O74700 87 aa8.61□□□□□ -1.03
SSL2YIL143C CMK2P22517 447 aa8.61□□□□□ -1.03
SSL2YIL143C PEX3P28795 441 aa8.61□□□□□ -1.03
SSL2YIL143C ACH1P32316 526 aa8.61□□□□□ -1.03
SSL2YIL143C RPT1P33299 467 aaKnown RBP8.61□□□□□ -1.03
SSL2YIL143C MRPL17P36528 281 aa8.61□□□□□ -1.03
SSL2YIL143C RBG1P39729 369 aa8.61□□□□□ -1.03
SSL2YIL143C ATP22P50273 684 aaPredicted RBP8.61□□□□□ -1.03
SSL2YIL143C PRP38Q00723 242 aaPredicted RBP8.61□□□□□ -1.03
SSL2YIL143C YOL019WQ08157 551 aa8.61□□□□□ -1.03
SSL2YIL143C MED11Q99278 115 aa8.61□□□□□ -1.03
SSL2YIL143C SEC53P07283 254 aaKnown RBP8.6□□□□□ -1.03
SSL2YIL143C PUP1P25043 261 aa8.6□□□□□ -1.03
SSL2YIL143C TFA2P36145 328 aa8.6□□□□□ -1.03
SSL2YIL143C ENT5Q03769 411 aaKnown RBP8.6□□□□□ -1.03
SSL2YIL143C YDL073WQ07454 984 aa8.6□□□□□ -1.03
SSL2YIL143C NBP2Q12163 236 aa8.6□□□□□ -1.03
SSL2YIL143C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SSL2YIL143C HEM2P05373 342 aa8.6□□□□□ -1.03
SSL2YIL143C RPB4P20433 221 aaPredicted RBP8.6□□□□□ -1.03
SSL2YIL143C PUP3P25451 205 aaKnown RBP8.6□□□□□ -1.03
SSL2YIL143C MUP3P38734 546 aa8.6□□□□□ -1.03
SSL2YIL143C CDC1P40986 491 aa8.6□□□□□ -1.03
SSL2YIL143C NET1P47035 1189 aa8.6□□□□□ -1.03
SSL2YIL143C IBD2P53892 351 aa8.6□□□□□ -1.03
SSL2YIL143C MSC2Q03455 724 aa8.6□□□□□ -1.03
SSL2YIL143C SPG3Q04398 127 aaPredicted RBP8.6□□□□□ -1.03
SSL2YIL143C URC2Q04411 772 aa8.6□□□□□ -1.03
SSL2YIL143C APC4Q04601 652 aa8.6□□□□□ -1.03
SSL2YIL143C MRX10Q05648 414 aa8.6□□□□□ -1.03
SSL2YIL143C RKM1Q08961 583 aaPredicted RBP8.6□□□□□ -1.03
SSL2YIL143C GPM2Q12008 311 aa8.6□□□□□ -1.03
SSL2YIL143C RCN2Q12044 265 aa8.6□□□□□ -1.03
SSL2YIL143C THP3Q12049 470 aaKnown RBP8.6□□□□□ -1.03
SSL2YIL143C COS2P0CX12 379 aa8.59□□□□□ -1.03
SSL2YIL143C COS3P0CX13 379 aa8.59□□□□□ -1.03
SSL2YIL143C MRP13P12686 339 aa8.59□□□□□ -1.03
SSL2YIL143C CLB3P24870 427 aa8.59□□□□□ -1.03
SSL2YIL143C YIH1P25637 258 aa8.59□□□□□ -1.03
SSL2YIL143C PAT1P25644 796 aaKnown RBP8.59□□□□□ -1.03
SSL2YIL143C SYN8P31377 255 aa8.59□□□□□ -1.03
SSL2YIL143C STE14P32584 239 aa8.59□□□□□ -1.03
SSL2YIL143C BOL3P39724 118 aa8.59□□□□□ -1.03
SSL2YIL143C COS4P43542 379 aa8.59□□□□□ -1.03
SSL2YIL143C UPF3P48412 387 aaKnown RBP8.59□□□□□ -1.03
SSL2YIL143C BOL2P53082 120 aa8.59□□□□□ -1.03
SSL2YIL143C SLD3P53135 668 aa8.59□□□□□ -1.03
SSL2YIL143C EFM5P53200 248 aaKnown RBP8.59□□□□□ -1.03
SSL2YIL143C HOL1P53389 586 aa8.59□□□□□ -1.03
SSL2YIL143C TOF2Q02208 771 aa8.59□□□□□ -1.03
SSL2YIL143C UGO1Q03327 502 aa8.59□□□□□ -1.03
SSL2YIL143C TIF35Q04067 274 aaKnown RBP8.59□□□□□ -1.03
SSL2YIL143C ARP7Q12406 477 aa8.59□□□□□ -1.03
SSL2YIL143C CBP2P03874 630 aaPredicted RBP8.59□□□□□ -1.03
SSL2YIL143C ECM8P38246 354 aa8.59□□□□□ -1.03
SSL2YIL143C VAC8P39968 578 aa8.59□□□□□ -1.03
SSL2YIL143C MNL2Q12205 849 aa8.59□□□□□ -1.03
SSL2YIL143C PRC1P00729 532 aa8.58□□□□□ -1.04
SSL2YIL143C SKT5P34226 696 aa8.58□□□□□ -1.04
SSL2YIL143C YHR078WP38799 552 aa8.58□□□□□ -1.04
SSL2YIL143C RAI1P53063 387 aaKnown RBP8.58□□□□□ -1.04
SSL2YIL143C SWP1Q02795 286 aa8.58□□□□□ -1.04
SSL2YIL143C YML131WQ03102 365 aa8.58□□□□□ -1.04
SSL2YIL143C GOT1Q03554 138 aa8.58□□□□□ -1.04
SSL2YIL143C BRE4Q07660 1125 aa8.58□□□□□ -1.04
SSL2YIL143C GRC3Q07845 632 aa8.58□□□□□ -1.04
SSL2YIL143C DNL4Q08387 944 aaPredicted RBP8.58□□□□□ -1.04
SSL2YIL143C NUS1Q12063 375 aa8.58□□□□□ -1.04
SSL2YIL143C YOL159C-AQ3E769 90 aa8.58□□□□□ -1.04
SSL2YIL143C AFI1Q99222 893 aa8.58□□□□□ -1.04
SSL2YIL143C PPZ1P26570 692 aa8.58□□□□□ -1.04
SSL2YIL143C ARP2P32381 391 aaKnown RBP8.58□□□□□ -1.04
SSL2YIL143C APE2P32454 952 aaKnown RBP8.58□□□□□ -1.04
SSL2YIL143C MTW1P39731 289 aa8.58□□□□□ -1.04
SSL2YIL143C HAT2P39984 401 aa8.58□□□□□ -1.04
SSL2YIL143C YEL023CP39992 682 aa8.58□□□□□ -1.04
SSL2YIL143C PTR3P43606 678 aa8.58□□□□□ -1.04
SSL2YIL143C TWF1P53250 332 aa8.58□□□□□ -1.04
SSL2YIL143C HRD3Q05787 833 aa8.58□□□□□ -1.04
SSL2YIL143C MED2Q12124 431 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms