RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W MRPS17Q03246 237 aaPredicted RBP5.83□□□□□ -1.48
SKN1YGR143W SMP3Q04174 516 aa5.83□□□□□ -1.48
SKN1YGR143W YLR225CQ05948 407 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W YLR173WQ06247 608 aa5.83□□□□□ -1.48
SKN1YGR143W YPR084WQ06821 456 aa5.83□□□□□ -1.48
SKN1YGR143W GTT2Q12390 233 aa5.83□□□□□ -1.48
SKN1YGR143W MDM12Q92328 271 aa5.83□□□□□ -1.48
SKN1YGR143W CPA2P03965 1118 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W CMK1P27466 446 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W YHL008CP38750 627 aa5.83□□□□□ -1.48
SKN1YGR143W RGI1P40043 161 aaPredicted RBP5.83□□□□□ -1.48
SKN1YGR143W DSE1P40077 573 aa5.83□□□□□ -1.48
SKN1YGR143W RPC17P47076 161 aa5.83□□□□□ -1.48
SKN1YGR143W PTK2P47116 818 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W VPS70P47161 811 aa5.83□□□□□ -1.48
SKN1YGR143W CTF18P49956 741 aa5.83□□□□□ -1.48
SKN1YGR143W SNF12P53628 566 aa5.83□□□□□ -1.48
SKN1YGR143W YNL040WP53960 456 aaPredicted RBP5.83□□□□□ -1.48
SKN1YGR143W YMD8Q03697 442 aa5.83□□□□□ -1.48
SKN1YGR143W GSF2Q04697 403 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W FEX1Q08913 375 aa5.83□□□□□ -1.48
SKN1YGR143W SMF3Q12078 473 aaPredicted RBP5.83□□□□□ -1.48
SKN1YGR143W DCS2Q12123 353 aa5.83□□□□□ -1.48
SKN1YGR143W NTO1Q12311 748 aa5.83□□□□□ -1.48
SKN1YGR143W PGA3Q12746 312 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W YBL029C-AQ3E756 94 aa5.83□□□□□ -1.48
SKN1YGR143W KIN28P06242 306 aa5.82□□□□□ -1.48
SKN1YGR143W ERG12P07277 443 aa5.82□□□□□ -1.48
SKN1YGR143W PFK1P16861 987 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W UTR1P21373 530 aa5.82□□□□□ -1.48
SKN1YGR143W RPI1P23250 407 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W PDR3P33200 976 aa5.82□□□□□ -1.48
SKN1YGR143W BCK2P33306 851 aa5.82□□□□□ -1.48
SKN1YGR143W MCD4P36051 919 aa5.82□□□□□ -1.48
SKN1YGR143W GLY1P37303 387 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W HMT1P38074 348 aa5.82□□□□□ -1.48
SKN1YGR143W MCM7P38132 845 aa5.82□□□□□ -1.48
SKN1YGR143W SLM4P38247 162 aa5.82□□□□□ -1.48
SKN1YGR143W ERP5P38819 212 aa5.82□□□□□ -1.48
SKN1YGR143W LOH1P47055 219 aa5.82□□□□□ -1.48
SKN1YGR143W YDL183CP48569 320 aa5.82□□□□□ -1.48
SKN1YGR143W YDR541CQ03049 344 aa5.82□□□□□ -1.48
SKN1YGR143W YML037CQ03703 340 aa5.82□□□□□ -1.48
SKN1YGR143W DPB4Q04603 196 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W RCO1Q04779 684 aa5.82□□□□□ -1.48
SKN1YGR143W TRE2Q08693 809 aa5.82□□□□□ -1.48
SKN1YGR143W RCN2Q12044 265 aa5.82□□□□□ -1.48
SKN1YGR143W MLH3Q12083 715 aa5.82□□□□□ -1.48
SKN1YGR143W LDB17Q12342 491 aa5.82□□□□□ -1.48
SKN1YGR143W YGR161W-CQ3E744 92 aa5.82□□□□□ -1.48
SKN1YGR143W PRB1P09232 635 aa5.82□□□□□ -1.48
SKN1YGR143W MRP13P12686 339 aa5.82□□□□□ -1.48
SKN1YGR143W APA1P16550 321 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W AAC3P18238 307 aa5.82□□□□□ -1.48
SKN1YGR143W PET9P18239 318 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W SDH2P21801 266 aa5.82□□□□□ -1.48
SKN1YGR143W RSA4P25382 515 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W YBL036CP38197 257 aa5.82□□□□□ -1.48
SKN1YGR143W STB5P38699 743 aa5.82□□□□□ -1.48
SKN1YGR143W MNN9P39107 395 aaKnown RBP5.82□□□□□ -1.48
SKN1YGR143W EFM4P40516 257 aa5.82□□□□□ -1.48
SKN1YGR143W CIN1P40987 1014 aa5.82□□□□□ -1.48
SKN1YGR143W FET5P43561 622 aa5.82□□□□□ -1.48
SKN1YGR143W CIT3P43635 486 aa5.82□□□□□ -1.48
SKN1YGR143W DAN4P47179 1161 aa5.82□□□□□ -1.48
SKN1YGR143W PAC10P48363 199 aa5.82□□□□□ -1.48
SKN1YGR143W ARP4P80428 489 aa5.82□□□□□ -1.48
SKN1YGR143W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SKN1YGR143W MUK1Q02866 612 aa5.82□□□□□ -1.48
SKN1YGR143W GIM5Q04493 163 aa5.82□□□□□ -1.48
SKN1YGR143W DCR2Q05924 578 aa5.82□□□□□ -1.48
SKN1YGR143W YOL019WQ08157 551 aa5.82□□□□□ -1.48
SKN1YGR143W DIN7Q12086 430 aa5.82□□□□□ -1.48
SKN1YGR143W TY3A-GQ12173 290 aa5.82□□□□□ -1.48
SKN1YGR143W TRM11Q12463 433 aa5.82□□□□□ -1.48
SKN1YGR143W TY3A-IQ99219 290 aa5.82□□□□□ -1.48
SKN1YGR143W MET17P06106 444 aa5.81□□□□□ -1.48
SKN1YGR143W MAS1P10507 462 aa5.81□□□□□ -1.48
SKN1YGR143W MIP1P15801 1254 aa5.81□□□□□ -1.48
SKN1YGR143W CBF1P17106 351 aa5.81□□□□□ -1.48
SKN1YGR143W VPS33P20795 691 aa5.81□□□□□ -1.48
SKN1YGR143W APA2P22108 325 aa5.81□□□□□ -1.48
SKN1YGR143W YSP3P25036 478 aa5.81□□□□□ -1.48
SKN1YGR143W IFM1P25038 676 aa5.81□□□□□ -1.48
SKN1YGR143W SNT1P25357 1226 aa5.81□□□□□ -1.48
SKN1YGR143W RRT12P25381 491 aa5.81□□□□□ -1.48
SKN1YGR143W ETR1P38071 380 aa5.81□□□□□ -1.48
SKN1YGR143W ARA1P38115 344 aa5.81□□□□□ -1.48
SKN1YGR143W UBX7P38349 436 aa5.81□□□□□ -1.48
SKN1YGR143W VPS45P38932 577 aa5.81□□□□□ -1.48
SKN1YGR143W VAB2P40003 282 aa5.81□□□□□ -1.48
SKN1YGR143W TPA1P40032 644 aaKnown RBP5.81□□□□□ -1.48
SKN1YGR143W MRPS18P42847 217 aa5.81□□□□□ -1.48
SKN1YGR143W VPS62P53285 467 aa5.81□□□□□ -1.48
SKN1YGR143W RSM27P53305 110 aa5.81□□□□□ -1.48
SKN1YGR143W RLI1Q03195 608 aaKnown RBP5.81□□□□□ -1.48
SKN1YGR143W ACL4Q03771 387 aa5.81□□□□□ -1.48
SKN1YGR143W YPR196WQ06595 470 aa5.81□□□□□ -1.48
SKN1YGR143W FRE3Q08905 711 aa5.81□□□□□ -1.48
SKN1YGR143W YPL216WQ08964 1102 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms