RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	NPP1	P25353	742 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	RDH54	P38086	958 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	URA8	P38627	578 aa	Predicted RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	OAF1	P39720	1047 aa	Predicted RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	PEP8	P40335	379 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	RTT101	P47050	842 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	NOP19	P53317	196 aa	Predicted RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	YPR003C	P53394	754 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	EOS1	P53938	366 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	VPS34	P22543	875 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	GCD11	P32481	527 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	DPH1	P40487	425 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PDR15	YDR406W	POL31	P46957	487 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	LSC1	P53598	329 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	NMA111	P53920	997 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	IRC15	Q02733	499 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	SSL1	Q04673	461 aa	Predicted RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	BLS1	Q06071	122 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	FUM1	P08417	488 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	YCR015C	P25616	317 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	CYM1	P32898	989 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	SET3	P36124	751 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	PHO89	P38361	574 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	RFC3	P38629	340 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	YHL008C	P38750	627 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	YJL045W	P47052	634 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	TAH11	P47112	604 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	HSV2	P50079	448 aa	Predicted RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	SNF12	P53628	566 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	ORC3	P54790	616 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	MMT1	Q03218	510 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	YMR160W	Q03823	816 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	CHS5	Q12114	671 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	NSL1	Q12143	216 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	MPD2	Q99316	277 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	CYT1	P07143	309 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	VAC17	P25591	423 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	SIN4	P32259	974 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	HBS1	P32769	611 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	SLA2	P33338	968 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	IFA38	P38286	347 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	FSH1	P38777	243 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	YMR178W	Q03219	274 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	RTC5	Q12108	567 aa	Known RBP	4.6	□□□□□ -1.67
PDR15	YDR406W	SEC39	Q12745	709 aa		4.6	□□□□□ -1.67
PDR15	YDR406W	MRPL33	P20084	86 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ASK1	P35734	292 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	SLX1	P38324	304 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ASG7	P46993	209 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	YGL108C	P53139	140 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ARC35	P53731	342 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	YNR061C	P53747	219 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	REX2	P54964	269 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	ULP1	Q02724	621 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	PEX25	Q02969	394 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	RRP17	Q04031	235 aa	Predicted RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	DPB4	Q04603	196 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	HRD3	Q05787	833 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	CDC123	Q05791	360 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	EAF1	Q06337	982 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ARV1	Q06541	321 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	CLP1	Q08685	445 aa	Predicted RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	UAF30	Q08747	228 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	UBA1	P22515	1024 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	YBR053C	P38235	358 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ARF3	P40994	183 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
PDR15	YDR406W	CHA4	P43634	648 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	ZAP1	P47043	880 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	PAN2	P53010	1115 aa	Predicted RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	MRPL19	P53875	158 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	EGD1	Q02642	157 aa	Known RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	RPM2	Q02773	1202 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	YMR209C	Q03648	457 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	KRE28	Q04431	385 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	UTP21	Q06078	939 aa	Predicted RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	YOR238W	Q08634	303 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	LEA1	Q08963	238 aa	Predicted RBP	4.59	□□□□□ -1.67
PDR15	YDR406W	VIK1	Q12045	647 aa		4.59	□□□□□ -1.67
PDR15	YDR406W	CPA1	P07258	411 aa	Known RBP	4.59	□□□□□ -1.68
PDR15	YDR406W	GCD2	P12754	651 aa	Predicted RBP	4.59	□□□□□ -1.68
PDR15	YDR406W	FUR1	P18562	216 aa	Known RBP	4.59	□□□□□ -1.68
PDR15	YDR406W	FAR1	P21268	830 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	GID7	P25569	745 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	SHM2	P37291	469 aa	Known RBP	4.59	□□□□□ -1.68
PDR15	YDR406W	FTH1	P38310	465 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	HIS6	P40545	261 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	SDT1	P53078	280 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	TEP1	P53916	434 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	YPR114W	Q06107	315 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	NMD4	Q12129	218 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	NSI1	Q12457	570 aa		4.59	□□□□□ -1.68
PDR15	YDR406W	THP2	O13539	261 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	RPC40	P07703	335 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	SEC63	P14906	663 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	EXO70	P19658	623 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SEC15	P22224	910 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	PDE1	P22434	369 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms