RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W NCE102Q12207 173 aaRIP-Chip data4.73□□□□□ -1.65not detected
SPT3YDR392W SMC6Q12749 1114 aa4.73□□□□□ -1.65
SPT3YDR392W AI5_ALPHAQ9ZZX1 630 aa4.73□□□□□ -1.65
SPT3YDR392W SRV2P17555 526 aaKnown RBP4.72□□□□□ -1.65
SPT3YDR392W NRP1P32770 719 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SPT3YDR392W SKN1P33336 771 aa4.72□□□□□ -1.65
SPT3YDR392W SIP3P38717 1229 aa4.72□□□□□ -1.65
SPT3YDR392W RPS10BP46784 105 aaKnown RBP4.72□□□□□ -1.65
SPT3YDR392W RTT101P47050 842 aa4.72□□□□□ -1.65
SPT3YDR392W NIT3P49954 291 aa4.72□□□□□ -1.65
SPT3YDR392W AIM14P53109 570 aa4.72□□□□□ -1.65
SPT3YDR392W RPN14P53196 417 aa4.72□□□□□ -1.65
SPT3YDR392W YMR160WQ03823 816 aa4.72□□□□□ -1.65
SPT3YDR392W APC5Q08683 685 aa4.72□□□□□ -1.65
SPT3YDR392W RPS10AQ08745 105 aaPredicted RBP4.72□□□□□ -1.65
SPT3YDR392W VPS68Q12016 184 aa4.72□□□□□ -1.65
SPT3YDR392W BPH1P25356 2167 aa4.72□□□□□ -1.65
SPT3YDR392W NAT1P12945 854 aaKnown RBP4.71□□□□□ -1.66
SPT3YDR392W MSP1P28737 362 aa4.71□□□□□ -1.66
SPT3YDR392W RIX1P38883 763 aaPredicted RBP4.71□□□□□ -1.66
SPT3YDR392W FAD1P38913 306 aa4.71□□□□□ -1.66
SPT3YDR392W YIL166CP40445 542 aa4.71□□□□□ -1.66
SPT3YDR392W PFD1P46988 109 aa4.71□□□□□ -1.66
SPT3YDR392W IMO32P53219 342 aa4.71□□□□□ -1.66
SPT3YDR392W RSC1P53236 928 aa4.71□□□□□ -1.66
SPT3YDR392W HOL1P53389 586 aa4.71□□□□□ -1.66
SPT3YDR392W NRG1Q03125 231 aa4.71□□□□□ -1.66
SPT3YDR392W MUS81Q04149 632 aaPredicted RBP4.71□□□□□ -1.66
SPT3YDR392W RRP45Q05636 305 aaKnown RBP4.71□□□□□ -1.66
SPT3YDR392W PLB3Q08108 686 aa4.71□□□□□ -1.66
SPT3YDR392W MSA1Q08471 629 aa4.71□□□□□ -1.66
SPT3YDR392W ENV7Q12003 364 aa4.71□□□□□ -1.66
SPT3YDR392W YLR415CO13578 112 aa4.7□□□□□ -1.66
SPT3YDR392W SPS100P13130 326 aa4.7□□□□□ -1.66
SPT3YDR392W BUD14P27637 709 aa4.7□□□□□ -1.66
SPT3YDR392W EFB1P32471 206 aaKnown RBP4.7□□□□□ -1.66
SPT3YDR392W UBP13P38187 747 aa4.7□□□□□ -1.66
SPT3YDR392W DED81P38707 554 aaKnown RBP4.7□□□□□ -1.66
SPT3YDR392W PIH1P38768 344 aa4.7□□□□□ -1.66
SPT3YDR392W YMR124WP39523 943 aaKnown RBP4.7□□□□□ -1.66
SPT3YDR392W LRO1P40345 661 aa4.7□□□□□ -1.66
SPT3YDR392W YJR039WP47107 1121 aa4.7□□□□□ -1.66
SPT3YDR392W HSH155P49955 971 aaKnown RBP4.7□□□□□ -1.66
SPT3YDR392W DUG3P53871 357 aa4.7□□□□□ -1.66
SPT3YDR392W SSL2Q00578 843 aa4.7□□□□□ -1.66
SPT3YDR392W ADH6Q04894 360 aaKnown RBP4.7□□□□□ -1.66
SPT3YDR392W HOF1Q05080 669 aa4.7□□□□□ -1.66
SPT3YDR392W CUR1Q06469 252 aa4.7□□□□□ -1.66
SPT3YDR392W SIL1Q08199 421 aa4.7□□□□□ -1.66
SPT3YDR392W HAL9Q12180 1030 aa4.7□□□□□ -1.66
SPT3YDR392W YNL162W-AQ3E7A8 72 aa4.7□□□□□ -1.66
SPT3YDR392W YPR089WO13585 888 aa4.69□□□□□ -1.66
SPT3YDR392W LAT1P12695 482 aaKnown RBP4.69□□□□□ -1.66
SPT3YDR392W THR4P16120 514 aaKnown RBP4.69□□□□□ -1.66
SPT3YDR392W SAT4P25333 603 aaKnown RBP4.69□□□□□ -1.66
SPT3YDR392W DMC1P25453 334 aa4.69□□□□□ -1.66
SPT3YDR392W MTR2P34232 184 aaKnown RBP4.69□□□□□ -1.66
SPT3YDR392W LYS1P38998 373 aaRIP-Chip data4.69□□□□□ -1.66not detected
SPT3YDR392W SSU1P41930 458 aa4.69□□□□□ -1.66
SPT3YDR392W MKC7P53379 596 aa4.69□□□□□ -1.66
SPT3YDR392W IPI3P53877 555 aa4.69□□□□□ -1.66
SPT3YDR392W PPN1Q04119 674 aa4.69□□□□□ -1.66
SPT3YDR392W SPO75Q07798 868 aa4.69□□□□□ -1.66
SPT3YDR392W IRC13Q08630 104 aa4.69□□□□□ -1.66
SPT3YDR392W ARP7Q12406 477 aa4.69□□□□□ -1.66
SPT3YDR392W FAS1P07149 2051 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W UBR1P19812 1950 aa4.68□□□□□ -1.66
SPT3YDR392W CAR1P00812 333 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W GLN4P13188 809 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W MUD2P36084 527 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W FET3P38993 636 aa4.68□□□□□ -1.66
SPT3YDR392W FTR1P40088 404 aa4.68□□□□□ -1.66
SPT3YDR392W PCI8P40512 444 aa4.68□□□□□ -1.66
SPT3YDR392W SSY5P47002 699 aa4.68□□□□□ -1.66
SPT3YDR392W OCA1P50946 238 aaPredicted RBP4.68□□□□□ -1.66
SPT3YDR392W DAM1P53267 343 aa4.68□□□□□ -1.66
SPT3YDR392W ARE2P53629 642 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W TGL2P54857 326 aa4.68□□□□□ -1.66
SPT3YDR392W SLK19Q08581 821 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W APL5Q08951 932 aaKnown RBP4.68□□□□□ -1.66
SPT3YDR392W TPO4Q12256 659 aa4.68□□□□□ -1.66
SPT3YDR392W RGT2Q12300 763 aa4.68□□□□□ -1.66
SPT3YDR392W SSH4P32343 579 aa4.67□□□□□ -1.66
SPT3YDR392W HIS7P33734 552 aaKnown RBP4.67□□□□□ -1.66
SPT3YDR392W CBR1P38626 284 aaKnown RBP4.67□□□□□ -1.66
SPT3YDR392W FMP52P40008 231 aa4.67□□□□□ -1.66
SPT3YDR392W RAD26P40352 1085 aa4.67□□□□□ -1.66
SPT3YDR392W RHO3Q00245 231 aaKnown RBP4.67□□□□□ -1.66
SPT3YDR392W YDR209CQ03480 137 aa4.67□□□□□ -1.66
SPT3YDR392W UFO1Q04511 668 aa4.67□□□□□ -1.66
SPT3YDR392W ARO10Q06408 635 aa4.67□□□□□ -1.66
SPT3YDR392W RSC3Q06639 885 aa4.67□□□□□ -1.66
SPT3YDR392W HBN1Q96VH4 193 aa4.67□□□□□ -1.66
SPT3YDR392W RPL15AP05748 204 aaKnown RBP4.66□□□□□ -1.66
SPT3YDR392W DAL7P21826 554 aa4.66□□□□□ -1.66
SPT3YDR392W HIR2P32480 875 aa4.66□□□□□ -1.66
SPT3YDR392W URA8P38627 578 aaPredicted RBP4.66□□□□□ -1.66
SPT3YDR392W TAN1P53072 289 aaPredicted RBP4.66□□□□□ -1.66
SPT3YDR392W ERP6P53198 216 aa4.66□□□□□ -1.66
SPT3YDR392W YTP1P53584 459 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms