RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W PPH22P23595 377 aa4.19□□□□□ -1.74
HPR1YDR138W YJU2P28320 278 aaPredicted RBP4.19□□□□□ -1.74
HPR1YDR138W TOD6P34219 525 aa4.19□□□□□ -1.74
HPR1YDR138W NUP133P36161 1157 aa4.19□□□□□ -1.74
HPR1YDR138W DIA4P38705 446 aaPredicted RBP4.19□□□□□ -1.74
HPR1YDR138W YHR054CP38780 354 aa4.19□□□□□ -1.74
HPR1YDR138W YMR147WP40218 223 aaKnown RBP4.19□□□□□ -1.74
HPR1YDR138W YPR003CP53394 754 aa4.19□□□□□ -1.74
HPR1YDR138W YMR160WQ03823 816 aa4.19□□□□□ -1.74
HPR1YDR138W RRB1Q04225 511 aaKnown RBP4.19□□□□□ -1.74
HPR1YDR138W YLR456WQ06199 204 aa4.19□□□□□ -1.74
HPR1YDR138W MF(ALPHA)1P01149 165 aa4.19□□□□□ -1.74
HPR1YDR138W PRP6P19735 899 aaPredicted RBP4.19□□□□□ -1.74
HPR1YDR138W VMA16P23968 213 aa4.19□□□□□ -1.74
HPR1YDR138W YIM1P28625 365 aa4.19□□□□□ -1.74
HPR1YDR138W SMI1P32566 505 aa4.19□□□□□ -1.74
HPR1YDR138W APL3P38065 1025 aa4.19□□□□□ -1.74
HPR1YDR138W AGP2P38090 596 aa4.19□□□□□ -1.74
HPR1YDR138W SLM4P38247 162 aa4.19□□□□□ -1.74
HPR1YDR138W VBA2P38358 474 aaKnown RBP4.19□□□□□ -1.74
HPR1YDR138W OTU2P38747 307 aaKnown RBP4.19□□□□□ -1.74
HPR1YDR138W PMT6P42934 759 aa4.19□□□□□ -1.74
HPR1YDR138W RPN11P43588 306 aaKnown RBP4.19□□□□□ -1.74
HPR1YDR138W DPB11P47027 764 aaPredicted RBP4.19□□□□□ -1.74
HPR1YDR138W ALT2P52892 507 aa4.19□□□□□ -1.74
HPR1YDR138W YGR111WP53265 400 aa4.19□□□□□ -1.74
HPR1YDR138W ATG4P53867 494 aa4.19□□□□□ -1.74
HPR1YDR138W FIN1Q03898 291 aa4.19□□□□□ -1.74
HPR1YDR138W YDR179W-AQ03983 463 aa4.19□□□□□ -1.74
HPR1YDR138W INP53Q12271 1107 aa4.19□□□□□ -1.74
HPR1YDR138W GLE1Q12315 538 aa4.19□□□□□ -1.74
HPR1YDR138W YDL007C-AQ2V2Q0 85 aa4.19□□□□□ -1.74
HPR1YDR138W STE11P23561 717 aa4.18□□□□□ -1.74
HPR1YDR138W ADE17P38009 592 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W PCH2P38126 564 aa4.18□□□□□ -1.74
HPR1YDR138W AFG3P39925 761 aa4.18□□□□□ -1.74
HPR1YDR138W ALG5P40350 334 aa4.18□□□□□ -1.74
HPR1YDR138W YJL107CP42947 387 aa4.18□□□□□ -1.74
HPR1YDR138W KEL2P50090 882 aa4.18□□□□□ -1.74
HPR1YDR138W SHE4P51534 789 aa4.18□□□□□ -1.74
HPR1YDR138W DRN1P53255 507 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W DPB4Q04603 196 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W DBP9Q06218 594 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W NCE102Q12207 173 aaRIP-Chip data4.18□□□□□ -1.74not detected
HPR1YDR138W RPN2P32565 945 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W LIP5P32875 414 aa4.18□□□□□ -1.74
HPR1YDR138W TUL1P36096 758 aa4.18□□□□□ -1.74
HPR1YDR138W RPC37P36121 282 aa4.18□□□□□ -1.74
HPR1YDR138W RPF2P36160 344 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W MTG2P38860 518 aa4.18□□□□□ -1.74
HPR1YDR138W PHM8P40025 321 aa4.18□□□□□ -1.74
HPR1YDR138W CCT7P42943 550 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W AIM22P47051 409 aa4.18□□□□□ -1.74
HPR1YDR138W RAD17P48581 401 aa4.18□□□□□ -1.74
HPR1YDR138W DCP2P53550 970 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W RHO5P53879 331 aaKnown RBP4.18□□□□□ -1.74
HPR1YDR138W SMX3P54999 86 aaPredicted RBP4.18□□□□□ -1.74
HPR1YDR138W PLM2Q04383 521 aa4.18□□□□□ -1.74
HPR1YDR138W RAD34Q06665 692 aa4.18□□□□□ -1.74
HPR1YDR138W ARO3P14843 370 aaKnown RBP4.17□□□□□ -1.74
HPR1YDR138W ART10P18634 518 aaKnown RBP4.17□□□□□ -1.74
HPR1YDR138W CLN1P20437 546 aa4.17□□□□□ -1.74
HPR1YDR138W SIP1P32578 815 aa4.17□□□□□ -1.74
HPR1YDR138W NIP100P33420 868 aa4.17□□□□□ -1.74
HPR1YDR138W YMC2P38087 329 aa4.17□□□□□ -1.74
HPR1YDR138W IMD2P38697 523 aaKnown RBP4.17□□□□□ -1.74
HPR1YDR138W LNP1P38878 278 aa4.17□□□□□ -1.74
HPR1YDR138W UIP3P39547 235 aa4.17□□□□□ -1.74
HPR1YDR138W GIP4P39732 760 aa4.17□□□□□ -1.74
HPR1YDR138W OSW5P40219 148 aa4.17□□□□□ -1.74
HPR1YDR138W CDC1P40986 491 aa4.17□□□□□ -1.74
HPR1YDR138W YFL015CP43578 164 aa4.17□□□□□ -1.74
HPR1YDR138W NET1P47035 1189 aa4.17□□□□□ -1.74
HPR1YDR138W MNN10P50108 393 aaKnown RBP4.17□□□□□ -1.74
HPR1YDR138W YNL247WP53852 767 aaKnown RBP4.17□□□□□ -1.74
HPR1YDR138W EOS1P53938 366 aa4.17□□□□□ -1.74
HPR1YDR138W ACL4Q03771 387 aa4.17□□□□□ -1.74
HPR1YDR138W PDS5Q04264 1277 aa4.17□□□□□ -1.74
HPR1YDR138W SIL1Q08199 421 aa4.17□□□□□ -1.74
HPR1YDR138W STF1P01098 86 aa4.16□□□□□ -1.74
HPR1YDR138W PPR1P07272 904 aaPredicted RBP4.16□□□□□ -1.74
HPR1YDR138W ABF1P14164 731 aa4.16□□□□□ -1.74
HPR1YDR138W ADH7P25377 361 aa4.16□□□□□ -1.74
HPR1YDR138W IMG1P25626 169 aa4.16□□□□□ -1.74
HPR1YDR138W CDC15P27636 974 aa4.16□□□□□ -1.74
HPR1YDR138W YME1P32795 747 aa4.16□□□□□ -1.74
HPR1YDR138W PPQ1P32945 549 aa4.16□□□□□ -1.74
HPR1YDR138W YBL055CP34220 418 aaPredicted RBP4.16□□□□□ -1.74
HPR1YDR138W STU2P46675 888 aa4.16□□□□□ -1.74
HPR1YDR138W YGL117WP53133 265 aa4.16□□□□□ -1.74
HPR1YDR138W YPL062WQ02781 134 aa4.16□□□□□ -1.74
HPR1YDR138W DON1Q05610 365 aa4.16□□□□□ -1.74
HPR1YDR138W SMD2Q06217 110 aaKnown RBP4.16□□□□□ -1.74
HPR1YDR138W VTA1Q06263 330 aa4.16□□□□□ -1.74
HPR1YDR138W BMS1Q08965 1183 aaKnown RBP4.16□□□□□ -1.74
HPR1YDR138W SEC3P33332 1336 aaKnown RBP4.16□□□□□ -1.74
HPR1YDR138W ADE5,7P07244 802 aaKnown RBP4.16□□□□□ -1.74
HPR1YDR138W PET123P17558 318 aa4.16□□□□□ -1.74
HPR1YDR138W GAS1P22146 559 aaKnown RBP4.16□□□□□ -1.74
HPR1YDR138W MSP1P28737 362 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms