RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	YMR187C	Q03236	431 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	RSM28	Q03430	361 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	DLT1	Q04216	342 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	ARG7	Q04728	441 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	YLR224W	Q05947	369 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	YSH1	Q06224	779 aa	Predicted RBP	5.3	□□□□□ -1.56
LCB2	YDR062W	PML1	Q07930	204 aa	Predicted RBP	5.3	□□□□□ -1.56
LCB2	YDR062W	MDY2	Q12285	212 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	YBT1	P32386	1661 aa		5.3	□□□□□ -1.56
LCB2	YDR062W	MET3	P08536	511 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	KGD2	P19262	463 aa	Predicted RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	PRD1	P25375	712 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	FUB1	P25659	250 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	RML2	P32611	393 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	SUR1	P33300	382 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	TIF3	P34167	436 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	PHO11	P35842	467 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	CCL1	P37366	393 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	AAP1	P37898	856 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	SLM4	P38247	162 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	PHO12	P38693	467 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	DIA4	P38705	446 aa	Predicted RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	MRX1	P40050	688 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	OSW5	P40219	148 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	NPA3	P47122	385 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	DCP2	P53550	970 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	PDR16	P53860	351 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	IPI3	P53877	555 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	PRO2	P54885	456 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	RPS15	Q01855	142 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	BMS1	Q08965	1183 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	RTC5	Q12108	567 aa	Known RBP	5.29	□□□□□ -1.56
LCB2	YDR062W	YKL033W-A	Q86ZR7	236 aa		5.29	□□□□□ -1.56
LCB2	YDR062W	COX1	P00401	534 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	RPL6B	P05739	176 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	WSS1	P38838	269 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	SEC31	P38968	1273 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	ELO3	P40319	345 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	UBX6	P47049	396 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	MSY1	P48527	492 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	SHE4	P51534	789 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	DIA3	P52290	468 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	MLC1	P53141	149 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	NSG2	P53898	299 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	TIM11	P81449	96 aa	Predicted RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	RPL6A	Q02326	176 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	YPL034W	Q03083	165 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	YDR132C	Q03900	495 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	ENB1	Q08299	606 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	MCA1	Q08601	432 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	UAF30	Q08747	228 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
LCB2	YDR062W	VPS54	Q12071	889 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	HER1	Q12276	1246 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	CEX1	Q12453	761 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	AI5_ALPHA	Q9ZZX1	630 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	SIR3	P06701	978 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	LPD1	P09624	499 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	DAL80	P26343	269 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	CNE1	P27825	502 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	NIP1	P32497	812 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	SSE1	P32589	693 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	HES1	P35843	434 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	RPF2	P36160	344 aa	Known RBP	5.28	□□□□□ -1.56
LCB2	YDR062W	PCH2	P38126	564 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	SMC3	P47037	1230 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	YNL144C	P53907	740 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	EFM6	P53970	246 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	YDL086W	Q07505	273 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	YDL242W	Q07746	117 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	YPL216W	Q08964	1102 aa		5.28	□□□□□ -1.56
LCB2	YDR062W	HIP1	P06775	603 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	MRP13	P12686	339 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	ABF1	P14164	731 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	DAP2	P18962	818 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	SRP54	P20424	541 aa	Known RBP	5.27	□□□□□ -1.57
LCB2	YDR062W	UGP1	P32861	499 aa	Known RBP	5.27	□□□□□ -1.57
LCB2	YDR062W	PPQ1	P32945	549 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	GDT1	P38301	280 aa	Predicted RBP	5.27	□□□□□ -1.57
LCB2	YDR062W	YAP3	P38749	330 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	STB2	P46679	850 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	BUD17	P53727	317 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	RHO5	P53879	331 aa	Known RBP	5.27	□□□□□ -1.57
LCB2	YDR062W	NOP6	Q07623	225 aa	Known RBP	5.27	□□□□□ -1.57
LCB2	YDR062W	IRC13	Q08630	104 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	MLH3	Q12083	715 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	TAF3	Q12297	353 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	LAS17	Q12446	633 aa		5.27	□□□□□ -1.57
LCB2	YDR062W	HAP1	P0CE41	1502 aa		5.26	□□□□□ -1.57
LCB2	YDR062W	HXK2	P04807	486 aa	Known RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	TRP4	P07285	380 aa	Predicted RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	YPK1	P12688	680 aa	Known RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	KGD1	P20967	1014 aa	Known RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	AMD2	P22580	549 aa		5.26	□□□□□ -1.57
LCB2	YDR062W	IDH2	P28241	369 aa	Known RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	HIS7	P33734	552 aa	Known RBP	5.26	□□□□□ -1.57
LCB2	YDR062W	YBR144C	P34215	104 aa		5.26	□□□□□ -1.57
LCB2	YDR062W	TUL1	P36096	758 aa		5.26	□□□□□ -1.57
LCB2	YDR062W	UIP3	P39547	235 aa		5.26	□□□□□ -1.57
LCB2	YDR062W	CHS6	P40955	746 aa		5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms