RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	MDM36	Q06820	579 aa		4.61	□□□□□ -1.67
SWC3	YAL011W	TY3A-G	Q12173	290 aa		4.61	□□□□□ -1.67
SWC3	YAL011W	HER1	Q12276	1246 aa		4.61	□□□□□ -1.67
SWC3	YAL011W	TY3A-I	Q99219	290 aa		4.61	□□□□□ -1.67
SWC3	YAL011W	YLR358C	O13565	187 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	ADE4	P04046	510 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	SEC53	P07283	254 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SWC3	YAL011W	CLB4	P24871	460 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	KAR4	P25583	335 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	PAT1	P25644	796 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	CYS3	P31373	394 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	YUH1	P35127	236 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	HEL1	P36113	551 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	MRPL36	P36531	177 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	AGP2	P38090	596 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SSP120	P39931	234 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	YIL054W	P40524	105 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	NEO1	P40527	1151 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	PKP1	P40530	394 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	HXT16	P47185	567 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	MRX6	P48564	524 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	KTR5	P53966	522 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	ARO80	Q04052	950 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	VBA4	Q04602	768 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	ADE13	Q05911	482 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	BUD20	Q08004	166 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	AIM39	Q08223	395 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	CIR2	Q08822	631 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	TRE1	Q08919	783 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	NMD4	Q12129	218 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	ATG11	Q12527	1178 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	CHS1	P08004	1131 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SIR1	P21691	654 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	PHO84	P25297	587 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	YCR015C	P25616	317 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	MVD1	P32377	396 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	HXT3	P32466	567 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	APE3	P37302	537 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	YMC2	P38087	329 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SCS2	P40075	244 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	YJL070C	P40361	888 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	MET12	P46151	657 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	ARC1	P46672	376 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	TMA22	P47089	198 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	BPL1	P48445	690 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	NIT3	P49954	291 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	PSP1	P50896	841 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	EFM5	P53200	248 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	PDR16	P53860	351 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	GIM3	P53900	129 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	REX2	P54964	269 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	MZM1	Q03429	123 aa	Predicted RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	MSC2	Q03455	724 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SPC24	Q04477	213 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SPE3	Q12074	293 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	CHS5	Q12114	671 aa	Known RBP	4.6	□□□□□ -1.67
SWC3	YAL011W	BMT6	Q12291	365 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	SKM1	Q12469	655 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	UBR2	Q07963	1872 aa		4.6	□□□□□ -1.67
SWC3	YAL011W	GLN3	P18494	730 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	VPS3	P23643	1011 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	PHO91	P27514	894 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	URA7	P28274	579 aa	Known RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	SRB2	P34162	210 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	SET3	P36124	751 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	APN2	P38207	520 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	YBR138C	P38277	524 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	YHR054C	P38780	354 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	LIN1	P38852	340 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	LYS9	P38999	446 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	AVT2	P39981	480 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	ALD5	P40047	520 aa	Known RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	SCC4	P40090	624 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	YJR061W	P40355	935 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	UTP18	P40362	594 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	STB4	P50104	949 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	UBC9	P50623	157 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	ALG11	P53954	548 aa	Known RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	DOT1	Q04089	582 aa	Known RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	YLR177W	Q06251	628 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	LUC7	Q07508	261 aa	Predicted RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	DIS3	Q08162	1001 aa	Known RBP	4.59	□□□□□ -1.67
SWC3	YAL011W	MCH5	Q08777	521 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	YLR053C	Q12026	108 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	VPS54	Q12071	889 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	YOL159C-A	Q3E769	90 aa		4.59	□□□□□ -1.67
SWC3	YAL011W	TEF1	P02994	458 aa	Known RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	ARD1	P07347	238 aa	Predicted RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	SSC1	P0CS90	654 aa	Known RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	DBP2	P24783	546 aa	Known RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	SAT4	P25333	603 aa	Known RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	CDC20	P26309	610 aa		4.58	□□□□□ -1.68
SWC3	YAL011W	MSS51	P32335	436 aa		4.58	□□□□□ -1.68
SWC3	YAL011W	ASF2	P32448	525 aa	Predicted RBP	4.58	□□□□□ -1.68
SWC3	YAL011W	SFA1	P32771	386 aa		4.58	□□□□□ -1.68
SWC3	YAL011W	YKL077W	P36081	392 aa		4.58	□□□□□ -1.68
SWC3	YAL011W	ETR1	P38071	380 aa		4.58	□□□□□ -1.68
SWC3	YAL011W	ADH5	P38113	351 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms