RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	CLD1	P53264	445 aa		11.49	□□□□□ -0.57
DED1	YOR204W	GRX3	Q03835	250 aa		11.49	□□□□□ -0.57
DED1	YOR204W	TVP15	Q03860	143 aa		11.49	□□□□□ -0.57
DED1	YOR204W	RIF2	Q06208	395 aa		11.49	□□□□□ -0.57
DED1	YOR204W	SEC10	Q06245	871 aa		11.49	□□□□□ -0.57
DED1	YOR204W	VTA1	Q06263	330 aa		11.49	□□□□□ -0.57
DED1	YOR204W	NPP1	P25353	742 aa		11.49	□□□□□ -0.57
DED1	YOR204W	SNT1	P25357	1226 aa		11.49	□□□□□ -0.57
DED1	YOR204W	YCR090C	P25654	182 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	EAP1	P36041	632 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	IML3	P38265	245 aa		11.49	□□□□□ -0.57
DED1	YOR204W	HXT5	P38695	592 aa		11.49	□□□□□ -0.57
DED1	YOR204W	UBP6	P43593	499 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	TEL2	P53038	688 aa		11.49	□□□□□ -0.57
DED1	YOR204W	HEL2	Q05580	639 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	RSC3	Q06639	885 aa		11.49	□□□□□ -0.57
DED1	YOR204W	NOB1	Q08444	459 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	SAM4	Q08985	325 aa	Known RBP	11.49	□□□□□ -0.57
DED1	YOR204W	NOT5	Q12514	560 aa	Predicted RBP	11.49	□□□□□ -0.57
DED1	YOR204W	NAG1	Q8TGN9	163 aa		11.49	□□□□□ -0.57
DED1	YOR204W	YPT6	Q99260	215 aa		11.49	□□□□□ -0.57
DED1	YOR204W	FMP27	Q06179	2628 aa		11.48	□□□□□ -0.57
DED1	YOR204W	TFC3	P34111	1160 aa		11.48	□□□□□ -0.57
DED1	YOR204W	GIP1	P38229	639 aa		11.48	□□□□□ -0.57
DED1	YOR204W	CYC2	P38909	366 aa		11.48	□□□□□ -0.57
DED1	YOR204W	STN1	P38960	494 aa		11.48	□□□□□ -0.57
DED1	YOR204W	GIP4	P39732	760 aa		11.48	□□□□□ -0.57
DED1	YOR204W	ART5	P53244	586 aa	Known RBP	11.48	□□□□□ -0.57
DED1	YOR204W	YNL058C	P53947	316 aa		11.48	□□□□□ -0.57
DED1	YOR204W	ARX1	Q03862	593 aa	Known RBP	11.48	□□□□□ -0.57
DED1	YOR204W	OPI10	Q08202	246 aa		11.48	□□□□□ -0.57
DED1	YOR204W	RPS9A	O13516	197 aa	Known RBP	11.47	□□□□□ -0.57
DED1	YOR204W	HSC82	P15108	705 aa	Known RBP	11.47	□□□□□ -0.57
DED1	YOR204W	RPB4	P20433	221 aa	Predicted RBP	11.47	□□□□□ -0.57
DED1	YOR204W	SEC15	P22224	910 aa		11.47	□□□□□ -0.57
DED1	YOR204W	PTH2	P34222	208 aa		11.47	□□□□□ -0.57
DED1	YOR204W	SKT5	P34226	696 aa		11.47	□□□□□ -0.57
DED1	YOR204W	RNR4	P49723	345 aa	Known RBP	11.47	□□□□□ -0.57
DED1	YOR204W	NUP84	P52891	726 aa		11.47	□□□□□ -0.57
DED1	YOR204W	SUB1	P54000	292 aa	Known RBP	11.47	□□□□□ -0.57
DED1	YOR204W	CLU1	Q03690	1277 aa	Known RBP	11.47	□□□□□ -0.57
DED1	YOR204W	EMI1	Q04406	187 aa		11.47	□□□□□ -0.57
DED1	YOR204W	ALR1	Q08269	859 aa		11.47	□□□□□ -0.57
DED1	YOR204W	TRM8	Q12009	286 aa		11.47	□□□□□ -0.57
DED1	YOR204W	CPA1	P07258	411 aa	Known RBP	11.46	□□□□□ -0.57
DED1	YOR204W	MLS1	P30952	554 aa		11.46	□□□□□ -0.57
DED1	YOR204W	TIP20	P33891	701 aa		11.46	□□□□□ -0.57
DED1	YOR204W	GMH1	P36125	273 aa		11.46	□□□□□ -0.57
DED1	YOR204W	SHU2	P38957	223 aa		11.46	□□□□□ -0.57
DED1	YOR204W	LSM5	P40089	93 aa	Known RBP	11.46	□□□□□ -0.57
DED1	YOR204W	COA1	P40452	197 aa		11.46	□□□□□ -0.57
DED1	YOR204W	YRB1	P41920	201 aa	Known RBP	11.46	□□□□□ -0.57
DED1	YOR204W	ARC1	P46672	376 aa	Known RBP	11.46	□□□□□ -0.57
DED1	YOR204W	HST3	P53687	447 aa		11.46	□□□□□ -0.57
DED1	YOR204W	NIS1	P53939	407 aa		11.46	□□□□□ -0.57
DED1	YOR204W	LSM3	P57743	89 aa	Known RBP	11.46	□□□□□ -0.57
DED1	YOR204W	HPF1	Q05164	967 aa		11.46	□□□□□ -0.57
DED1	YOR204W	FUM1	P08417	488 aa	Known RBP	11.46	□□□□□ -0.58
DED1	YOR204W	HOM2	P13663	365 aa	Known RBP	11.46	□□□□□ -0.58
DED1	YOR204W	GUK1	P15454	187 aa	Known RBP	11.46	□□□□□ -0.58
DED1	YOR204W	RSC6	P25632	483 aa		11.46	□□□□□ -0.58
DED1	YOR204W	CIN8	P27895	1000 aa		11.46	□□□□□ -0.58
DED1	YOR204W	CCR4	P31384	837 aa	Known RBP	11.46	□□□□□ -0.58
DED1	YOR204W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	11.46	□□□□□ -0.58	not detected
DED1	YOR204W	ERP5	P38819	212 aa		11.46	□□□□□ -0.58
DED1	YOR204W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	11.46	□□□□□ -0.58	not detected
DED1	YOR204W	VPS16	Q03308	798 aa		11.46	□□□□□ -0.58
DED1	YOR204W	NHP10	Q03435	203 aa		11.46	□□□□□ -0.58
DED1	YOR204W	HDA3	Q06623	655 aa		11.46	□□□□□ -0.58
DED1	YOR204W	VAM6	Q07468	1049 aa		11.46	□□□□□ -0.58
DED1	YOR204W	PST1	Q12355	444 aa		11.46	□□□□□ -0.58
DED1	YOR204W	CDC21	P06785	304 aa		11.45	□□□□□ -0.58
DED1	YOR204W	TUB1	P09733	447 aa	Known RBP	11.45	□□□□□ -0.58
DED1	YOR204W	NIP1	P32497	812 aa	Known RBP	11.45	□□□□□ -0.58
DED1	YOR204W	RIM11	P38615	370 aa		11.45	□□□□□ -0.58
DED1	YOR204W	YHR020W	P38708	688 aa	Known RBP	11.45	□□□□□ -0.58
DED1	YOR204W	SSN3	P39073	555 aa		11.45	□□□□□ -0.58
DED1	YOR204W	DHH1	P39517	506 aa	Known RBP	11.45	□□□□□ -0.58
DED1	YOR204W	UTP18	P40362	594 aa	Predicted RBP	11.45	□□□□□ -0.58
DED1	YOR204W	GCD14	P46959	383 aa	Predicted RBP	11.45	□□□□□ -0.58
DED1	YOR204W	YJR154W	P47181	346 aa		11.45	□□□□□ -0.58
DED1	YOR204W	MRM2	P53123	320 aa		11.45	□□□□□ -0.58
DED1	YOR204W	PRP16	P15938	1071 aa	Predicted RBP	11.44	□□□□□ -0.58
DED1	YOR204W	PRP4	P20053	465 aa	Known RBP	11.44	□□□□□ -0.58
DED1	YOR204W	CHL1	P22516	861 aa	Predicted RBP	11.44	□□□□□ -0.58
DED1	YOR204W	ATP11	P32453	318 aa		11.44	□□□□□ -0.58
DED1	YOR204W	SLX5	P32828	619 aa	Known RBP	11.44	□□□□□ -0.58
DED1	YOR204W	CSE1	P33307	960 aa		11.44	□□□□□ -0.58
DED1	YOR204W	YHB1	P39676	399 aa	Known RBP	11.44	□□□□□ -0.58
DED1	YOR204W	STB2	P46679	850 aa		11.44	□□□□□ -0.58
DED1	YOR204W	IBD2	P53892	351 aa		11.44	□□□□□ -0.58
DED1	YOR204W	ECM9	Q02202	377 aa		11.44	□□□□□ -0.58
DED1	YOR204W	YKR104W	P0CE69	306 aa		11.44	□□□□□ -0.58
DED1	YOR204W	YAR066W	P0CX18	203 aa		11.44	□□□□□ -0.58
DED1	YOR204W	YHR214W	P0CX19	203 aa		11.44	□□□□□ -0.58
DED1	YOR204W	VPS34	P22543	875 aa		11.44	□□□□□ -0.58
DED1	YOR204W	HCM1	P25364	564 aa		11.44	□□□□□ -0.58
DED1	YOR204W	MRE11	P32829	692 aa		11.44	□□□□□ -0.58
DED1	YOR204W	HSE1	P38753	452 aa		11.44	□□□□□ -0.58
DED1	YOR204W	FMO1	P38866	432 aa		11.44	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms