RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C NGL2Q03264 515 aaKnown RBP2.33□□□□□ -2.04
AFI1YOR129C RMT2Q03305 412 aa2.33□□□□□ -2.04
AFI1YOR129C TRS23Q03784 219 aa2.33□□□□□ -2.04
AFI1YOR129C RBA50Q04418 439 aa2.33□□□□□ -2.04
AFI1YOR129C ERB1Q04660 807 aaKnown RBP2.33□□□□□ -2.04
AFI1YOR129C SSQ1Q05931 657 aaPredicted RBP2.33□□□□□ -2.04
AFI1YOR129C BRX1Q08235 291 aaKnown RBP2.33□□□□□ -2.04
AFI1YOR129C MDY2Q12285 212 aa2.33□□□□□ -2.04
AFI1YOR129C YOR019WQ99248 730 aa2.33□□□□□ -2.04
AFI1YOR129C SEN2P16658 377 aa2.32□□□□□ -2.04
AFI1YOR129C FAR1P21268 830 aa2.32□□□□□ -2.04
AFI1YOR129C DMC1P25453 334 aa2.32□□□□□ -2.04
AFI1YOR129C RFA2P26754 273 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C CTS1P29029 562 aa2.32□□□□□ -2.04
AFI1YOR129C RME1P32338 300 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C HMX1P32339 317 aa2.32□□□□□ -2.04
AFI1YOR129C SRB4P32569 687 aa2.32□□□□□ -2.04
AFI1YOR129C DOA4P32571 926 aa2.32□□□□□ -2.04
AFI1YOR129C UBP11P36026 717 aa2.32□□□□□ -2.04
AFI1YOR129C MIA40P36046 403 aa2.32□□□□□ -2.04
AFI1YOR129C PXL1P36166 706 aa2.32□□□□□ -2.04
AFI1YOR129C TDP1P38319 544 aa2.32□□□□□ -2.04
AFI1YOR129C RTS1P38903 757 aa2.32□□□□□ -2.04
AFI1YOR129C STN1P38960 494 aa2.32□□□□□ -2.04
AFI1YOR129C ARF3P40994 183 aaRIP-Chip data2.32□□□□□ -2.04not detected
AFI1YOR129C AVT1P47082 602 aa2.32□□□□□ -2.04
AFI1YOR129C RET3P53600 189 aa2.32□□□□□ -2.04
AFI1YOR129C YPL071CQ02864 156 aa2.32□□□□□ -2.04
AFI1YOR129C MUB1Q03162 620 aa2.32□□□□□ -2.04
AFI1YOR129C RSM28Q03430 361 aa2.32□□□□□ -2.04
AFI1YOR129C YMR206WQ03695 313 aa2.32□□□□□ -2.04
AFI1YOR129C NDL1Q06568 189 aa2.32□□□□□ -2.04
AFI1YOR129C YDL242WQ07746 117 aa2.32□□□□□ -2.04
AFI1YOR129C LOT6Q07923 191 aa2.32□□□□□ -2.04
AFI1YOR129C SWT1Q12104 458 aa2.32□□□□□ -2.04
AFI1YOR129C NBP2Q12163 236 aa2.32□□□□□ -2.04
AFI1YOR129C RIO1Q12196 484 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C AHC1Q12433 566 aa2.32□□□□□ -2.04
AFI1YOR129C YBR255C-AQ3E776 120 aa2.32□□□□□ -2.04
AFI1YOR129C YER175W-AQ8TGU4 54 aa2.32□□□□□ -2.04
AFI1YOR129C Q0010Q9ZZX9 128 aa2.32□□□□□ -2.04
AFI1YOR129C MET17P06106 444 aa2.32□□□□□ -2.04
AFI1YOR129C YSP3P25036 478 aa2.32□□□□□ -2.04
AFI1YOR129C PRD1P25375 712 aa2.32□□□□□ -2.04
AFI1YOR129C LRE1P25579 583 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C YJU2P28320 278 aaPredicted RBP2.32□□□□□ -2.04
AFI1YOR129C CUE2P36075 443 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C YKL023WP36103 277 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C UTP9P38882 575 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C SLZ1P40167 298 aa2.32□□□□□ -2.04
AFI1YOR129C AAD10P47182 288 aa2.32□□□□□ -2.04
AFI1YOR129C LYS4P49367 693 aaPredicted RBP2.32□□□□□ -2.04
AFI1YOR129C YGR250CP53316 781 aaKnown RBP2.32□□□□□ -2.04
AFI1YOR129C SPC98P53540 846 aa2.32□□□□□ -2.04
AFI1YOR129C VPS75P53853 264 aa2.32□□□□□ -2.04
AFI1YOR129C SMX3P54999 86 aaPredicted RBP2.32□□□□□ -2.04
AFI1YOR129C SSL2Q00578 843 aa2.32□□□□□ -2.04
AFI1YOR129C UBP16Q02863 499 aa2.32□□□□□ -2.04
AFI1YOR129C ECM11Q04110 302 aa2.32□□□□□ -2.04
AFI1YOR129C GTB1Q04924 702 aa2.32□□□□□ -2.04
AFI1YOR129C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
AFI1YOR129C YPL216WQ08964 1102 aa2.32□□□□□ -2.04
AFI1YOR129C NMD4Q12129 218 aa2.32□□□□□ -2.04
AFI1YOR129C HUA2Q12134 243 aa2.32□□□□□ -2.04
AFI1YOR129C BUG1Q12191 341 aa2.32□□□□□ -2.04
AFI1YOR129C FRE6Q12473 712 aa2.32□□□□□ -2.04
AFI1YOR129C YBR126W-AQ8TGU7 68 aa2.32□□□□□ -2.04
AFI1YOR129C JIP3O13555 125 aa2.31□□□□□ -2.04
AFI1YOR129C CKA1P15790 372 aa2.31□□□□□ -2.04
AFI1YOR129C ELM1P32801 640 aa2.31□□□□□ -2.04
AFI1YOR129C LAS1P36146 502 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C STV1P37296 890 aa2.31□□□□□ -2.04
AFI1YOR129C MSG5P38590 489 aa2.31□□□□□ -2.04
AFI1YOR129C PCL5P38794 229 aa2.31□□□□□ -2.04
AFI1YOR129C PET100P38958 111 aa2.31□□□□□ -2.04
AFI1YOR129C YJL206CP39529 758 aa2.31□□□□□ -2.04
AFI1YOR129C JHD1P40034 492 aa2.31□□□□□ -2.04
AFI1YOR129C LSM5P40089 93 aaKnown RBP2.31□□□□□ -2.04
AFI1YOR129C MET18P40469 1032 aa2.31□□□□□ -2.04
AFI1YOR129C PMT6P42934 759 aa2.31□□□□□ -2.04
AFI1YOR129C ROK1P45818 564 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C SMC3P47037 1230 aa2.31□□□□□ -2.04
AFI1YOR129C NPA3P47122 385 aa2.31□□□□□ -2.04
AFI1YOR129C YGR079WP53249 370 aa2.31□□□□□ -2.04
AFI1YOR129C OGG1P53397 376 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C MUK1Q02866 612 aa2.31□□□□□ -2.04
AFI1YOR129C YMR155WQ03795 547 aa2.31□□□□□ -2.04
AFI1YOR129C YDR131CQ03899 556 aa2.31□□□□□ -2.04
AFI1YOR129C CTI6Q08923 506 aa2.31□□□□□ -2.04
AFI1YOR129C RKM1Q08961 583 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C KEL3Q08979 651 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C PDH1Q12428 516 aaKnown RBP2.31□□□□□ -2.04
AFI1YOR129C ERG27Q12452 347 aaKnown RBP2.31□□□□□ -2.04
AFI1YOR129C SKS1Q12505 502 aa2.31□□□□□ -2.04
AFI1YOR129C TEF1P02994 458 aaKnown RBP2.31□□□□□ -2.04
AFI1YOR129C AAC1P04710 309 aa2.31□□□□□ -2.04
AFI1YOR129C SEC53P07283 254 aaKnown RBP2.31□□□□□ -2.04
AFI1YOR129C KGD2P19262 463 aaPredicted RBP2.31□□□□□ -2.04
AFI1YOR129C PRE8P23639 250 aa2.31□□□□□ -2.04
AFI1YOR129C STE50P25344 346 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms