RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C CCT6P39079 546 aa9.64□□□□□ -0.87
MET28YIR017C TIM17P39515 158 aa9.64□□□□□ -0.87
MET28YIR017C GIP4P39732 760 aa9.64□□□□□ -0.87
MET28YIR017C YJL070CP40361 888 aa9.64□□□□□ -0.87
MET28YIR017C TDA10P42938 290 aa9.64□□□□□ -0.87
MET28YIR017C NBP35P52920 328 aa9.64□□□□□ -0.87
MET28YIR017C CAF120P53836 1060 aa9.64□□□□□ -0.87
MET28YIR017C SPO20Q04359 397 aa9.64□□□□□ -0.87
MET28YIR017C SSL1Q04673 461 aaPredicted RBP9.64□□□□□ -0.87
MET28YIR017C JIP5Q06214 492 aaPredicted RBP9.64□□□□□ -0.87
MET28YIR017C SEC10Q06245 871 aa9.64□□□□□ -0.87
MET28YIR017C MCD1Q12158 566 aa9.64□□□□□ -0.87
MET28YIR017C CDC10P25342 322 aaKnown RBP9.63□□□□□ -0.87
MET28YIR017C YCR090CP25654 182 aaKnown RBP9.63□□□□□ -0.87
MET28YIR017C RFA2P26754 273 aaKnown RBP9.63□□□□□ -0.87
MET28YIR017C MCM5P29496 775 aaKnown RBP9.63□□□□□ -0.87
MET28YIR017C MRE11P32829 692 aa9.63□□□□□ -0.87
MET28YIR017C PTM1P32857 523 aa9.63□□□□□ -0.87
MET28YIR017C RRN3P36070 627 aa9.63□□□□□ -0.87
MET28YIR017C RRP3P38712 501 aaKnown RBP9.63□□□□□ -0.87
MET28YIR017C PCF11P39081 626 aaPredicted RBP9.63□□□□□ -0.87
MET28YIR017C MGS1P40151 587 aa9.63□□□□□ -0.87
MET28YIR017C AXL1P40851 1208 aa9.63□□□□□ -0.87
MET28YIR017C MTO1P53070 669 aa9.63□□□□□ -0.87
MET28YIR017C SNO2P53823 222 aa9.63□□□□□ -0.87
MET28YIR017C YPL113CQ02961 396 aa9.63□□□□□ -0.87
MET28YIR017C TAF12Q03761 539 aa9.63□□□□□ -0.87
MET28YIR017C RSC3Q06639 885 aa9.63□□□□□ -0.87
MET28YIR017C NMT1P14743 455 aa9.62□□□□□ -0.87
MET28YIR017C SIS1P25294 352 aaKnown RBP9.62□□□□□ -0.87
MET28YIR017C TFC3P34111 1160 aa9.62□□□□□ -0.87
MET28YIR017C PTH2P34222 208 aa9.62□□□□□ -0.87
MET28YIR017C YKL100CP34248 587 aa9.62□□□□□ -0.87
MET28YIR017C THI80P35202 319 aa9.62□□□□□ -0.87
MET28YIR017C YPT52P36018 234 aaKnown RBP9.62□□□□□ -0.87
MET28YIR017C SRX1P36077 127 aa9.62□□□□□ -0.87
MET28YIR017C GOT1Q03554 138 aa9.62□□□□□ -0.87
MET28YIR017C GRS2Q06817 618 aa9.62□□□□□ -0.87
MET28YIR017C TRM8Q12009 286 aa9.62□□□□□ -0.87
MET28YIR017C NAG1Q8TGN9 163 aa9.62□□□□□ -0.87
MET28YIR017C MSB2P32334 1306 aa9.61□□□□□ -0.87
MET28YIR017C YPR089WO13585 888 aa9.61□□□□□ -0.87
MET28YIR017C COX3P00420 269 aa9.61□□□□□ -0.87
MET28YIR017C INH1P01097 85 aa9.61□□□□□ -0.87
MET28YIR017C RSR1P13856 272 aa9.61□□□□□ -0.87
MET28YIR017C HSC82P15108 705 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C VAC17P25591 423 aa9.61□□□□□ -0.87
MET28YIR017C RPC19P28000 142 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C SLX5P32828 619 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C RPF2P36160 344 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C UTP9P38882 575 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C MPT5P39016 859 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
MET28YIR017C LSM5P40089 93 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C BIR1P47134 954 aa9.61□□□□□ -0.87
MET28YIR017C EFM5P53200 248 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C RMI1Q02685 241 aa9.61□□□□□ -0.87
MET28YIR017C RNY1Q02933 434 aaKnown RBP9.61□□□□□ -0.87
MET28YIR017C SHE9Q04172 456 aa9.61□□□□□ -0.87
MET28YIR017C VPS68Q12016 184 aa9.61□□□□□ -0.87
MET28YIR017C APC9Q12107 265 aa9.61□□□□□ -0.87
MET28YIR017C UBR1P19812 1950 aa9.61□□□□□ -0.87
MET28YIR017C RHO2P06781 192 aa9.6□□□□□ -0.87
MET28YIR017C SKT5P34226 696 aa9.6□□□□□ -0.87
MET28YIR017C YBR062CP38239 180 aa9.6□□□□□ -0.87
MET28YIR017C YHR020WP38708 688 aaKnown RBP9.6□□□□□ -0.87
MET28YIR017C HSE1P38753 452 aa9.6□□□□□ -0.87
MET28YIR017C YHB1P39676 399 aaKnown RBP9.6□□□□□ -0.87
MET28YIR017C TIF34P40217 347 aaKnown RBP9.6□□□□□ -0.87
MET28YIR017C MAD3P47074 515 aa9.6□□□□□ -0.87
MET28YIR017C ZRG17P53735 605 aa9.6□□□□□ -0.87
MET28YIR017C YML119WQ03208 357 aa9.6□□□□□ -0.87
MET28YIR017C MFB1Q04922 465 aa9.6□□□□□ -0.87
MET28YIR017C YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
MET28YIR017C RPN8Q08723 338 aaKnown RBP9.6□□□□□ -0.87
MET28YIR017C TFB4Q12004 338 aa9.6□□□□□ -0.87
MET28YIR017C BEM2P39960 2167 aaKnown RBP9.6□□□□□ -0.87
MET28YIR017C YMR085WP0CF18 432 aa9.59□□□□□ -0.87
MET28YIR017C SEC15P22224 910 aa9.59□□□□□ -0.87
MET28YIR017C RSC6P25632 483 aa9.59□□□□□ -0.87
MET28YIR017C YSC84P32793 468 aa9.59□□□□□ -0.87
MET28YIR017C HSM3P38348 480 aa9.59□□□□□ -0.87
MET28YIR017C YHR045WP38775 560 aa9.59□□□□□ -0.87
MET28YIR017C UTP18P40362 594 aaPredicted RBP9.59□□□□□ -0.87
MET28YIR017C PRM2P40534 656 aa9.59□□□□□ -0.87
MET28YIR017C YRB1P41920 201 aaKnown RBP9.59□□□□□ -0.87
MET28YIR017C AIF1P52923 378 aa9.59□□□□□ -0.87
MET28YIR017C LSM3P57743 89 aaKnown RBP9.59□□□□□ -0.87
MET28YIR017C TVP15Q03860 143 aa9.59□□□□□ -0.87
MET28YIR017C HEL2Q05580 639 aaKnown RBP9.59□□□□□ -0.87
MET28YIR017C TMA46Q12000 345 aaKnown RBP9.59□□□□□ -0.87
MET28YIR017C UPC2Q12151 913 aa9.59□□□□□ -0.87
MET28YIR017C YPL247CQ12523 523 aa9.59□□□□□ -0.87
MET28YIR017C SWI5P08153 709 aa9.58□□□□□ -0.88
MET28YIR017C YAR066WP0CX18 203 aa9.58□□□□□ -0.88
MET28YIR017C YHR214WP0CX19 203 aa9.58□□□□□ -0.88
MET28YIR017C CLB1P24868 471 aa9.58□□□□□ -0.88
MET28YIR017C SPR1P32603 445 aa9.58□□□□□ -0.88
MET28YIR017C LRG1P35688 1017 aa9.58□□□□□ -0.88
MET28YIR017C YDR089WP38966 869 aa9.58□□□□□ -0.88
MET28YIR017C DHH1P39517 506 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms