RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	RPT6	Q01939	405 aa	Known RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	SMA1	Q02651	245 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	HMO1	Q03973	246 aa	Known RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	ARR2	Q06597	130 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	LOT6	Q07923	191 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	RCL1	Q08096	367 aa	Predicted RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	RSB1	Q08417	382 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	YPL260W	Q08977	551 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	AHC1	Q12433	566 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	SKM1	Q12469	655 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	ATG11	Q12527	1178 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	YOR111W	Q99210	232 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	UBA1	P22515	1024 aa	Known RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	CLB3	P24870	427 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	YCL068C	P25593	260 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	PRE4	P30657	266 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	YGL138C	P53122	345 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	PNC1	P53184	216 aa	Known RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	YNL247W	P53852	767 aa	Known RBP	3.49	□□□□□ -1.85
TMA108	YIL137C	YLR413W	Q06689	675 aa		3.49	□□□□□ -1.85
TMA108	YIL137C	VPS63	O13549	108 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	MSF1	P08425	469 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	PRO1	P32264	428 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	HXT3	P32466	567 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	RML2	P32611	393 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	SEF1	P34228	1148 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	YKR075C	P36155	307 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	APE3	P37302	537 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	MCX1	P38323	520 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	EFM2	P38347	419 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	QNS1	P38795	714 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	RTR1	P40084	226 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	SSU1	P41930	458 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	RHO5	P53879	331 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	RTT109	Q07794	436 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	BUD7	Q08754	746 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	MRPL23	Q12487	163 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YJR112W-A	Q3E743	109 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	LAG2	Q92325	660 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
TMA108	YIL137C	HOM2	P13663	365 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	EMC1	P25574	760 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	ERG1	P32476	496 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	REI1	P38344	393 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YHL017W	P38745	532 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	SSO2	P39926	295 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	RPN3	P40016	523 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	OTU1	P43558	301 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	YGL185C	P53100	379 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	YGL036W	P53185	909 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	OGG1	P53397	376 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YMR102C	Q03177	834 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	HBT1	Q07653	1046 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	AFT2	Q08957	416 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	GIS3	Q12418	502 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	RPO41	P13433	1351 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	UTP10	P42945	1769 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	GRR1	P24814	1151 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	ARO4	P32449	370 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	AUR1	P36107	401 aa	Predicted RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	ALY1	P36117	915 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	TAE1	P38340	232 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	SIP3	P38717	1229 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	MTW1	P39731	289 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	RPN11	P43588	306 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YGR054W	P53235	642 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YGR111W	P53265	400 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	DCP2	P53550	970 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	SQS1	P53866	767 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	YML082W	Q04533	649 aa	Known RBP	3.48	□□□□□ -1.85
TMA108	YIL137C	ASM4	Q05166	528 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	YLL007C	Q07799	665 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	YOR352W	Q08816	343 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	HUA2	Q12134	243 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	UPC2	Q12151	913 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	CTF3	Q12748	733 aa		3.48	□□□□□ -1.85
TMA108	YIL137C	SEC62	P21825	274 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	IDH2	P28241	369 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	ADE17	P38009	592 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	SBE22	P38814	852 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	UME6	P39001	836 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	JHD1	P40034	492 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	YER085C	P40058	173 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	URB2	P47108	1174 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	NCS6	P53088	359 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	YGR067C	P53243	804 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	UBP2	Q01476	1272 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	KAP120	Q02932	1032 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	SPO19	Q03029	223 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	RIM13	Q03792	727 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	PRS5	Q12265	496 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	ATG31	Q12421	196 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	GAL7	P08431	366 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	SRV2	P17555	526 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	PRS1	P32895	427 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	PMT1	P33775	817 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	KEL1	P38853	1164 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	GCV1	P48015	400 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	NIT3	P49954	291 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	RTT102	P53330	157 aa		3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms