RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W LYS5P50113 272 aa3.6□□□□□ -1.83
CAF130YGR134W MRPS35P53292 345 aa3.6□□□□□ -1.83
CAF130YGR134W RPT6Q01939 405 aaKnown RBP3.6□□□□□ -1.83
CAF130YGR134W MUS81Q04149 632 aaPredicted RBP3.6□□□□□ -1.83
CAF130YGR134W THI22Q06490 572 aa3.6□□□□□ -1.83
CAF130YGR134W TRM3Q07527 1436 aa3.6□□□□□ -1.83
CAF130YGR134W RAV1P47104 1357 aa3.6□□□□□ -1.83
CAF130YGR134W HXK2P04807 486 aaKnown RBP3.6□□□□□ -1.83
CAF130YGR134W DPH5P32469 300 aaPredicted RBP3.6□□□□□ -1.83
CAF130YGR134W SRB4P32569 687 aa3.6□□□□□ -1.83
CAF130YGR134W UME6P39001 836 aa3.6□□□□□ -1.83
CAF130YGR134W TIF4631P39935 952 aaKnown RBP3.6□□□□□ -1.83
CAF130YGR134W GET2P40056 285 aa3.6□□□□□ -1.83
CAF130YGR134W NEO1P40527 1151 aa3.6□□□□□ -1.83
CAF130YGR134W MSS2P40990 351 aa3.6□□□□□ -1.83
CAF130YGR134W EXG2P52911 562 aa3.6□□□□□ -1.83
CAF130YGR134W GIM3P53900 129 aa3.6□□□□□ -1.83
CAF130YGR134W YMR210WQ03649 449 aa3.6□□□□□ -1.83
CAF130YGR134W GIS4Q04233 774 aa3.6□□□□□ -1.83
CAF130YGR134W TCO89Q08921 799 aa3.6□□□□□ -1.83
CAF130YGR134W HUA2Q12134 243 aa3.6□□□□□ -1.83
CAF130YGR134W DNF2Q12675 1612 aa3.6□□□□□ -1.83
CAF130YGR134W MSS116P15424 664 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W MSN4P33749 630 aa3.59□□□□□ -1.83
CAF130YGR134W STB5P38699 743 aa3.59□□□□□ -1.83
CAF130YGR134W MNN9P39107 395 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W NUP60P39705 539 aa3.59□□□□□ -1.83
CAF130YGR134W GIP2P40036 548 aa3.59□□□□□ -1.83
CAF130YGR134W URM1P40554 99 aaPredicted RBP3.59□□□□□ -1.83
CAF130YGR134W CTK2P46962 323 aa3.59□□□□□ -1.83
CAF130YGR134W YGR111WP53265 400 aa3.59□□□□□ -1.83
CAF130YGR134W RHO5P53879 331 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W SLG1P54867 378 aa3.59□□□□□ -1.83
CAF130YGR134W MSC1Q03104 513 aa3.59□□□□□ -1.83
CAF130YGR134W USA1Q03714 838 aa3.59□□□□□ -1.83
CAF130YGR134W ACL4Q03771 387 aa3.59□□□□□ -1.83
CAF130YGR134W VMR1P38735 1592 aa3.59□□□□□ -1.83
CAF130YGR134W ARG82P07250 355 aa3.59□□□□□ -1.83
CAF130YGR134W ABF1P14164 731 aa3.59□□□□□ -1.83
CAF130YGR134W RPB4P20433 221 aaPredicted RBP3.59□□□□□ -1.83
CAF130YGR134W YCL068CP25593 260 aa3.59□□□□□ -1.83
CAF130YGR134W PGM1P33401 570 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W TRM2P33753 639 aa3.59□□□□□ -1.83
CAF130YGR134W ATP3P38077 311 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W ARP1P38696 384 aa3.59□□□□□ -1.83
CAF130YGR134W YMR124WP39523 943 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W AIR1P40507 360 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W KEL2P50090 882 aa3.59□□□□□ -1.83
CAF130YGR134W RAI1P53063 387 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W CUE3P53137 624 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W EAF7P53911 425 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W MRPS17Q03246 237 aaPredicted RBP3.59□□□□□ -1.83
CAF130YGR134W SLP1Q12232 587 aa3.59□□□□□ -1.83
CAF130YGR134W HRP1Q99383 534 aaKnown RBP3.59□□□□□ -1.83
CAF130YGR134W NUP192P47054 1683 aa3.59□□□□□ -1.83
CAF130YGR134W DNF3Q12674 1656 aa3.59□□□□□ -1.83
CAF130YGR134W LTE1P07866 1435 aa3.59□□□□□ -1.84
CAF130YGR134W RPP0P05317 312 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W ARD1P07347 238 aaPredicted RBP3.59□□□□□ -1.84
CAF130YGR134W YML002WP0CF17 737 aa3.59□□□□□ -1.84
CAF130YGR134W PET122P10355 254 aa3.59□□□□□ -1.84
CAF130YGR134W SEC62P21825 274 aa3.59□□□□□ -1.84
CAF130YGR134W RDS1P25611 832 aa3.59□□□□□ -1.84
CAF130YGR134W RPL5P26321 297 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W HSP104P31539 908 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W MGM101P32787 269 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W ASC1P38011 319 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W BZZ1P38822 633 aa3.59□□□□□ -1.84
CAF130YGR134W SSU1P41930 458 aa3.59□□□□□ -1.84
CAF130YGR134W RFX1P48743 811 aa3.59□□□□□ -1.84
CAF130YGR134W RPT4P53549 437 aaKnown RBP3.59□□□□□ -1.84
CAF130YGR134W CRF1Q04930 467 aa3.59□□□□□ -1.84
CAF130YGR134W ECM7Q06200 448 aa3.59□□□□□ -1.84
CAF130YGR134W ARR1Q06596 294 aa3.59□□□□□ -1.84
CAF130YGR134W RIM20Q12033 661 aa3.59□□□□□ -1.84
CAF130YGR134W ELG1Q12050 791 aa3.59□□□□□ -1.84
CAF130YGR134W MER1P16523 270 aa3.58□□□□□ -1.84
CAF130YGR134W TUP1P16649 713 aa3.58□□□□□ -1.84
CAF130YGR134W PDB1P32473 366 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W LRG1P35688 1017 aa3.58□□□□□ -1.84
CAF130YGR134W YKL070WP36087 169 aa3.58□□□□□ -1.84
CAF130YGR134W PXL1P36166 706 aa3.58□□□□□ -1.84
CAF130YGR134W YNG2P38806 282 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W SDP1P40479 209 aa3.58□□□□□ -1.84
CAF130YGR134W PFA3P42836 336 aa3.58□□□□□ -1.84
CAF130YGR134W TWF1P53250 332 aa3.58□□□□□ -1.84
CAF130YGR134W ADA2Q02336 434 aa3.58□□□□□ -1.84
CAF130YGR134W PUS7Q08647 676 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W AIR2Q12476 344 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W CTF3Q12748 733 aa3.58□□□□□ -1.84
CAF130YGR134W VPS63O13549 108 aa3.58□□□□□ -1.84
CAF130YGR134W ATP2P00830 511 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W TPK2P06245 380 aa3.58□□□□□ -1.84
CAF130YGR134W MSF1P08425 469 aa3.58□□□□□ -1.84
CAF130YGR134W SEC63P14906 663 aa3.58□□□□□ -1.84
CAF130YGR134W YME2P32843 850 aa3.58□□□□□ -1.84
CAF130YGR134W NNK1P36003 928 aa3.58□□□□□ -1.84
CAF130YGR134W TCD2P36101 447 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W YKR015CP36111 568 aa3.58□□□□□ -1.84
CAF130YGR134W SIC1P38634 284 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms